Myxocyprinus asiaticus (Chinese sucker): 127429365
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Entry
127429365 CDS
T08782
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03440
Homologous recombination
masi04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127429365
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127429365
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
masi01002
]
127429365
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
masi04121
]
127429365
03036 Chromosome and associated proteins [BR:
masi03036
]
127429365
03400 DNA repair and recombination proteins [BR:
masi03400
]
127429365
Peptidases and inhibitors [BR:
masi01002
]
Metallo peptidases
Family M67
127429365
Ubiquitin system [BR:
masi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
127429365
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
127429365
BRISC complex
127429365
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
127429365
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
127429365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
REP_ORF2-G2P
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
127429365
NCBI-ProteinID:
XP_051534317
LinkDB
All DBs
Position
38:complement(34187607..34200957)
Genome browser
AA seq
260 aa
AA seq
DB search
MAVSAVHLESDAFLVFMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRV
EISPEQLSAASTEAERFAEMTGRPIRVVGWYHSHPHITVWPSHVDIRTQAMYQMMDQGFV
GLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERIEIPIHVVPHEAIGKVCLESAVEL
PRILCQEEQDTYRRIHSLTHLDPITKIHNGSVFTKNLCSQMSAISGPLLQWLEDRLEQNN
QSIIELQKEKERLTQELASL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgagtgcggtgcatttagagtcagacgcctttcttgtgtttatgaatcatgct
ctcagtacggagaaagaggaagtgatgggtctgtgcattggcgaggtggacacaaaccgc
atcgtgcacattcattcagtcattattctgcgccgatcagacaagaggaaagaccgagta
gagatttccccagagcagctgtcagctgcatccactgaagccgagaggttcgcagagatg
acgggacgtcccattagagttgtgggctggtaccactctcatcctcacatcactgtgtgg
ccatcacatgtcgatatcaggactcaggcgatgtatcagatgatggatcaaggttttgtt
ggactcatcttctcatgttttatagaagataaaaacacaaagactggtagagttttgtac
acctgttttcagtcagtacaagcccaaaaaggctctgagtatgagcggattgaaatccca
atccatgtggtcccacatgaagccattgggaaagtctgtctggagtctgctgtggaactg
ccgagaatcctctgtcaggaagaacaggatacatacagaagaattcacagtctaactcat
ctggatcctatcacaaagatacataatggatcagtgttcactaaaaacctgtgcagtcag
atgtcggctataagcggcccgctgctacagtggctggaagatcgactggaacaaaataat
caaagtatcatcgaactccagaaagagaaagaacgactgacacaagaactggcttcatta
tga
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