Myxocyprinus asiaticus (Chinese sucker): 127429390
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Entry
127429390 CDS
T08782
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03030
DNA replication
masi03410
Base excision repair
masi03420
Nucleotide excision repair
masi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127429390
03410 Base excision repair
127429390
03420 Nucleotide excision repair
127429390
03430 Mismatch repair
127429390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
masi03032
]
127429390
03036 Chromosome and associated proteins [BR:
masi03036
]
127429390
03400 DNA repair and recombination proteins [BR:
masi03400
]
127429390
DNA replication proteins [BR:
masi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127429390
DNA Replication Termination Factors
ELG1-RFC complex
127429390
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
127429390
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127429390
Check point factors
HRAD17(Rad24)-RFC complex
127429390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
RCF1-5-like_lid
AAA_14
AAA_16
Mg_chelatase
Viral_helicase1
AAA_24
AAA_11
Rad17
RuvB_N
AAA_assoc_2
AAA_19
AAA_18
nSTAND3
MipZ
DNAX_ATPase_lid
AAA_28
ABC_tran
AAA_5
AAA_23
AAA_25
AAA_30
MeaB
NTPase_1
SLFN-g3_helicase
RNA_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
127429390
NCBI-ProteinID:
XP_051534356
LinkDB
All DBs
Position
38:complement(20532075..20540772)
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AA seq
383 aa
AA seq
DB search
MDVEMKETDSEQVDGQPKKDDTAPKPSTTAYELPWVEKYRPLKLNEIVGNEETVSRLEVF
AREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIKMF
AQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQS
RCAVLRYSKLRDDQIMMRLTEVVEKENLHVTNDGLEAIIFTAQGDMRQALNNLQSTNSGF
GYINSENVFKVCDEPHPLLVKGMLEHCVNANIEEAYKIIEQLWSLGYSPEDIIGNIFRVC
KTLQMPEYLKLEYIKDGLDYFCLHLKTSKKTKASASTVIVIIRVIPQEIGYTHMKVAEGV
NSLLQMAGLLGRLCSKTAAPDVS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgaaatgaaagagacagacagtgaacaagtcgatggacagcctaaaaaggat
gacactgcacccaaaccatcaacgactgcctatgaactaccatgggttgaaaaatacaga
cctctgaagttgaatgaaattgttggaaatgaggagactgtcagcagactggaggtgttt
gcgagagaaggaaacgttcccaacatcatcattgcaggtcctcctggcactggaaaaact
accagcattttatgtttggcaagagctcttctgggtccagccatgaaagatgctgtgctt
gagctgaatgcctccaatgaccgtggaatagatgtcgtgagaaacaagatcaaaatgttt
gcccagcaaaaagttacactccctaaaggtcgccacaagatcatcattcttgatgaggct
gacagcatgactgatggagcccagcaggctttgagaagaaccatggagatatactcaaaa
accacacgctttgccctggcatgtaatgcatcagataagatcatagagccaattcagtcc
cgctgcgccgtcctgcgttacagcaagctcagagacgatcagatcatgatgcgtctgaca
gaggtggtggagaaggagaacctgcatgtcaccaacgacggcctggaggctatcatcttc
accgctcaaggggacatgagacaggctctgaacaacctgcagtcaacaaattccggattt
ggctacatcaacagcgaaaatgtgttcaaggtgtgtgatgagccacatcctctgctggtt
aaaggcatgctagaacactgtgtcaacgccaacattgaggaagcctacaagattattgaa
cagctttggtccctaggatactccccagaggatataatcggaaacatctttagagtttgt
aagacattgcagatgccagaatatttgaagctagaatatattaaggatggattggattac
ttttgcttgcatcttaaaacttcaaaaaagacaaaagcctcagcatccactgtgattgta
atcatacgtgtgattcctcaggagattggctacacccatatgaaagtggctgaaggggtg
aactctctattacagatggctggtctactgggccgattgtgcagcaagactgcagcacct
gatgtcagctaa
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