Myxocyprinus asiaticus (Chinese sucker): 127429404
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Entry
127429404 CDS
T08782
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127429404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
masi03041
]
127429404
Spliceosome [BR:
masi03041
]
Complex B
Other components
Prp19-related factors
127429404
Complex C
127429404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
RRM_YTH1
zf-CCCH
RRM_3
zf-CCCH_4
zf-CCCH_3
RRM_PARP14_3
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
127429404
NCBI-ProteinID:
XP_051534390
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All DBs
Position
38:complement(25866077..25878218)
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AA seq
426 aa
AA seq
DB search
MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKFGKECKICARPFTVFRWCPG
SRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPRSDVNKEFYTQN
MEREIANSDGTRPVGLLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRFYGINDPVADKLLKRATTMPRLDPPEDKTITTLYIGGLG
ENVTDSELRNHFYQFGEIRTITIVQKQQCAFIQFATRQAAETAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEREKDGVTESGIRLEPVPGLPGALPPPPMSDDNAPANYFNLVPTSSPAV
VNLGLPPPPGVAMPPPPGFGPPMFHAMDPMAPPMPLPMAMRPPGQVHYPSQDPQRMGAHA
SRHGGP
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttcgttgggatccaacacttataacaggcaaaattgggaagactcagatttt
cccatcctctgtcaaacatgcttgggtgaaaacccttacatccggatgaccaaagaaaaa
tttggcaaggagtgcaagatctgtgcacgtcccttcacagtgtttcgctggtgtcctggc
agcaggatgcgctttaagaagaccgaagtgtgtcagacctgcagtaaaatgaagaatgtc
tgtcagacctgcctcttggatctggaatatggtttgcccattcaggttcgagacacaggg
ctgtccgttaaagatgaagtaccaagatcagacgtcaataaggagttttacactcagaat
atggagagagagatagctaattctgatggcacaagacctgtggggctgctggggaaggca
ccgagcagcagtgatatgcttctgaaactggctcgcaccacaccatactacaagaggaac
agaccacacatctgctcattctgggtgaagggggaatgcaagagaggggaagagtgtcca
tacagacacgagaagcccactgatccagatgacccgttggccgaccagaacattaaggac
cgtttctatggcatcaatgatcctgtggctgataaacttctgaagcgggccactaccatg
cccagactggacccacccgaggacaagaccatcaccacactttatatcggggggctggga
gaaaacgttacagactctgagctcagaaatcacttctaccagtttggagagattcgtacc
atcaccattgttcaaaagcagcagtgtgctttcatccagtttgccacacggcaggccgca
gagacagcagcagagaaatcctttaacaaactcatcgtcaatggacggcgccttaatgta
aaatggggcaggtcgcaggcagctcgagggaaagagagagagaaggatggggtgacagag
agtggaattaggctggagccagtgccaggtctccctggagctctgcctccaccccctatg
tctgatgacaatgcaccagccaactactttaacctggttcctaccagctctcctgctgtt
gtaaacctgggattgcctcctccacccggggttgccatgccgccaccacctggttttggt
cctcctatgttccatgccatggatcccatggctccgcccatgccccttccaatggccatg
aggccccctggacaggtccactacccatcccaggatcctcagcgaatgggtgcccatgca
agtcgccatggaggcccttaa
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