Myxocyprinus asiaticus (Chinese sucker): 127429459
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Entry
127429459 CDS
T08782
Name
(RefSeq) protocadherin-16
KO
K16507
protocadherin-16/23
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
masi04515
]
127429459
Cell adhesion molecules [BR:
masi04515
]
Cadherins
Cadherin related
127429459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_pro
Fibulin_C
Cadherin_4
RIFIN
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
127429459
NCBI-ProteinID:
XP_051534406
LinkDB
All DBs
Position
39:complement(11177096..11348157)
Genome browser
AA seq
3288 aa
AA seq
DB search
MKSVTLQEGRPIMDLLHHNRTLNWWILVVLYMALELMTTHSSIVLGTLQLQLDEEQPAGT
VVGDISAGLPPGMTASHYFISDHQGTGVGTDLDIDESTGIIKTAKVLDREERDRYSFIAV
TITGITVEVTILVNDINDHAPMFPRKRATFKIPEQTTIGTKFPLEPAVDADEDQLTTQGY
IITDGNIGQAFLLETKRGSNKVLYLDLVVNVVLDRETRSAYTLLLEAFDGGSPKRTGQMI
LDVTVQDINDNAPVFNQSRYHAMISENLQPRNNILQVFASDADEGNNGLVIYDINRRQSD
PDYYFVIDSHTGVITLNKPLDYEMRRVHELVVQARDNATQPEVTNAFVTIQVRDYNDNKP
TMTIIFLSEDGSPRVSEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDNI
IYLICIDEILDREEQDYYELIVKATDSGTPPLRAESLFTIQVTDVNDNPPIFDQQEYTKV
IPEVAFPGHFLLQVTARDKDQGPNGDVQYTILKNQGTHSDWFSVDAVTGIITTLTQLDYE
TDPMPIITVVATDRGRPSLSSTAVVKVILQDVNDNEPVFGSKFYNASIKENVAVGTCFME
VAATDADGGSFGSISYSLGSGPGSVTPSQFRIGKDNGQICTTTSLDRDQGPASYDFTITA
VDGGGLSSVTYVHVDLIDINDNRPAFYPLSYAVSLSTQSTPGTSVLRVIAQDPDVGENGR
VSYRTVPGGSSPFFTLNKDTGVISLSRALHGKANSVIAMVVSAQDGGGLTAPVNARVNIS
IVTGLVAPPVFEQDQYFFVVSEDALRGTQVGMVRASTKNGVSKDISYTISSGDPTGYFTV
DSETGALRTSLPLDYEAQPSLNLEVQAHCGNPPAFGQTRVRITVADINDNAPVFMPSSSE
SLILPEDTRMGTVVYKVQAEDHDSGPNGLLCFDLITSSAQRTFSIDHNSGHIRLIGSLSY
EIMPRYDLKVIAKDSGAPQLSSIFTLVIHVQAENSQGPVFDSLTYRVELKESTPLNTRFL
QVRAVNRDGGITTGVSSTFSTPLAYHLHPDSDAAGFGIVSDSGWLFVKSTLDREAKEMYL
LTVLATSGNRQLKKTGSATVRVSVMDENDNSPRFTQERAFLAVRENLPAGTGFGRVSASD
RDAGLNGRLSYRLLHLDRHFQINSHTGEISTRISLDRELQSSYQLIVVGQDGGTPPHSAT
STAFITVLDENDNAPSFTHAQAGRELLLQVLEGQPSGFLLGTIYARDPDEGENGTIFYSM
SGPRAERFSLNPNTGELRFSSPLSHSERPEYSFTIMASDRGSPPQSSTTALKIQVLSSSK
GSSTSNSQLLTLNSVEGAKPGSIVGSVRSPDSQTLPEEGLVTYTVVGGTDCDGTFVVDRQ
TGDVYLAQELDFEKAPQYTLQVEVDDISMPLPKSHFVTLVIDVQDSNDHAPQFPEDPITI
VVPENTEPGSTIYTFQAIDKDGSGPNSEVHYSVLQQWPNSPDILLLDPTTGVLSLGKMLD
HERTSSLLLVVQATDSAPDVSQRRRGTVTARVFVTDVNDNEPVFISPSVVSVMEDQPVGF
VIVYIMAVDADQGENGRVLYRIQSGNTGGKFSLNPETGSLSILKPIDREEQDLYNLTIVA
EDRGVQQHSSSQLLSIQVIDINDEAPYFEESEYEAFIAENQPAGTTVLVVSASDLDQGTN
GIVTYGSIVGDEFSIHPMTGVITTTKALDRETQGFYTVTVYARDGGSPPNFTKTRVRVTV
LDENDNRPVFGRVYYSLEVPENQEPVNLITIRATDHDSGDSGVVHYKITEGDHFGDFHLD
RKSGVLSTSRLLDRESKSGYTLTVEAQDKGTPSLTTTVTLDINVLDLNDNSPVFPSSSYS
VEILEDAPDGSFVLDVSASDQDIGSNSKLVYFLSPESRGMFIVDQHTGRIITAAALDREK
VATYSFQVYAMDSSASNPHNTSAQVTVHILDINDNAPYFVMDPLIINVSSTSISNHKVLA
TMRAEDKDFGANGSVFYRFASPVKGFTINSLTGAIQATEKLHALTQSQRTLIVVAMDQGN
PSQSSLGVVVVYIREQSYQGIRFSRNARDVNLQENAAKGTAVVQIQARYPDGSSSGINYS
IFSGNKQQSFSISPHTGEICVESSTGLDFEETPRLRLVVKAETASSSSFMAVNLLLQDVN
DNLPRFQLHNYVAYVREAQGYDHPIIQVLADDLDQGQNGQVTYSIRSSSMSSLFKIDPVT
GSISTAAIMDREIWTQTNLVITATDRGTPRLAGSATLTVIIIDLNDNSPTIPAPREVRVP
ENTLIGTVITQVTGNDVDSGPALSYSLLLDSDSQGKFGIHRYGGGVSLTSHLDFEERTWY
TLTISSSDSKQQTQANLTVLVEDVNDNAPVFSQDLYEVTVAEHLPAGSSVVTVTATDKDS
GENGRITYRVVSTKDMFYIDPSNGTLFIKEKVYFDSERPLILVVIEASDSGTPPLTALTT
VQVHVSDVNDNAPVFHQTEYRASVSEDEVPGFTILTLEAVDGDLFRDNCGFDFAIASGNI
GSTFQMESSVRFFEGHGFQTVGTLILVDKLDFEIVNFYNLTIVVSDRGIPQQSSSVPVLI
SVTDTNDNPPAFSKVEYNIVVNEGAETGTEILQLSALDPDLTPNRDVQYSISSGDEAELF
SVDRWTGSLCLQRSLDSERQSSHMLIIQASDGQGHFALAPVTVKVKNINNNWPYFPLKTL
TASIRENQPQNALVTILHAIDHDKGAYGELRYFLMYNSGNGKDSFLVNQTSGEVRTHFTF
DFEKVNTFNFIALAMDAGNYSATVTVQVFVTGEDEYDPVFTNSDFAFHVPDGAKKGQSIG
RVIAKDEDGGVDGIVLYTLANSSPYFEVNTSTGVISLKMDAYHRHDSRSKRETREMTLDV
IAHSPLENSRTASAHITIDVTHTSFGLAKDINVVLASTIAASLAAIVVLIITVVVIFLLR
SQRFKDQETCTRIVTHGTVLQSLEDSKVPGSDKLYHQTLAGYAASQTGNGGAAYTRGGSL
DPSHSSGRGSAEAEAAEDDEIRMINEYPQVSSISSSMQEHIAARGPDSGIQQDADQLSDI
SCEPGMDANQWFKGKKLASLSGTLASQLPSYRDEGGGYLGVGRGLSLSHPKDYTFPEDGK
PTVDGSLTAIIASDEELRGSYNWDYLLNWCPQFQPLANVFTEIARLKDENAPPNPRRSFQ
HKTKTDPKPRIDPPPLITSVAHPGAKTVHPKPAVGRTFPHLSLLRRSPIDHDGSVSSIAM
SPSFSPSLSPLAAHSPAICPYGVTQGHSSSIINTTEHSLEHEETEMRI
NT seq
9867 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcgtgactttgcaagaaggaaggccgattatggatctattacatcataaccgg
actttaaattggtggatattggtggtcctctatatggcgctagaactcatgacaacccac
tcatccatagtgcttggcacattgcagctgcaattggatgaagagcagccagcaggtact
gtggtaggtgacatcagtgctggcctgccacctggaatgactgcatcccactacttcatc
tcagatcatcagggtacaggtgttggtacagatctggacatcgatgagagtacgggcatc
ataaaaactgcaaaggtgttggaccgggaagagcgggaccgttacagcttcatagctgtc
actataactggtataaccgttgaagtcaccatcctagttaatgacatcaatgatcatgca
ccaatgtttcccagaaaaagagccacatttaaaatccctgaacagacaaccattggcact
aaatttcctcttgagcctgctgtggatgcagacgaggaccagctaactacacaaggctac
attataacagatggaaatataggacaggcttttcttcttgaaaccaaaagaggatccaac
aaagtcctttacttggatttggtggtcaatgtggttttagacagggagacaagatcagca
tatactctgctcttggaagcatttgatggtggttcacccaagcggacaggacagatgatc
ctggacgtgactgtacaggacatcaacgacaatgcccccgtctttaaccaaagtcgttac
catgcaatgatctccgagaaccttcaacccaggaacaatatactgcaggtttttgcttca
gatgctgatgagggtaacaatggcttggtgatctatgacatcaatcgaagacagagtgac
cctgattattactttgtcattgactctcacactggagttatcactcttaacaagcctttg
gattacgagatgagaagagtccatgaacttgtggtgcaagcacgggacaatgccactcag
ccagaagtcaccaacgcctttgtgaccatccaagtacgagactacaatgacaacaagccc
accatgaccataatcttcctcagtgaagatggttctccacgcgtatctgaaggagcacag
cctggccagtatgtggctaggatttcggtcacagacccagattatggcgaatacgccaat
gtcaacgtatctttggagggtggcgatggaaagtttgctttgaccaccaaagacaacatc
atctatctcatctgcattgacgagatccttgatcgtgaggagcaggactactatgaactc
atagtcaaggccacagattctggtacccctcctttacgggcagagtccttgttcaccatt
caggtcacagatgtcaacgataacccccctatattcgaccagcaggagtacactaaggtc
ataccagaggtagcctttccaggtcattttctactgcaggtaacagcacgggacaaagac
cagggccctaacggggatgttcaatacaccattctaaagaatcaaggaactcattcagac
tggttcagtgttgatgcagtcactgggatcatcactaccctgacccagctagattacgag
acggaccctatgccaattataactgtggtagccactgaccggggtcgaccatcattgtcc
tctacagctgtggtcaaagtgatcttacaggatgtaaatgacaatgaacctgtttttggg
agcaagttctacaatgcatccattaaggagaatgttgcagtagggacctgctttatggag
gtggcagccacagatgcggatggtgggtcttttggctccatctcctactctctgggctct
ggtccaggcagtgtgaccccgtcgcagttcagaattggcaaagacaatggccagatctgc
actaccaccagcttggatcgagatcaaggtccagccagctacgacttcaccatcacagct
gtggatgggggagggctgagttcagtgacctacgtgcatgtggacctgatagacataaat
gacaatcgcccagcattctaccctctgagttatgcagtcagtctgagcacgcagagcacc
ccaggaacctctgtcctgagggtgatcgctcaagacccagacgtgggagagaacggcagg
gtgtcataccgcacagtgcctggagggagctcacctttcttcaccctcaacaaagatact
ggagtgatttcactgtcacgtgcgctacatggaaaggcaaactcagtcattgcgatggtg
gtctcagctcaagatggtgggggtcttaccgctccagtcaatgccagggtcaacatcagc
atagtgacgggactggtcgcaccccctgtgtttgagcaagatcaatacttctttgtggtc
tctgaggatgccctgcgtggaactcaagttggcatggttcgagcaagtactaagaatggt
gtctcaaaggatatctcctacaccattagctctggtgacccaacaggctacttcacagtg
gattctgagactggggctttgagaacaagcttgcctctggactacgaggcccagcccagc
ttgaatcttgaggttcaggcacactgcggtaacccaccagcctttggccagactcgagtg
cgcattactgtggccgacatcaatgataatgcacctgtcttcatgccgtcttcctctgaa
tcgctgattcttccggaagacaccaggatgggtacagtggtgtacaaggtccaagcagaa
gaccatgactctggaccaaatggccttctatgttttgatctgattacaagcagtgcccag
agaaccttcagcattgatcacaacagcggtcatatccgtctgattggcagtttgtcgtac
gaaattatgccccgctatgacctgaaggttattgccaaagacagtggagctcctcaactg
agttccatcttcaccctggtcatccatgtgcaagctgagaacagccaaggtcctgtgttt
gatagcctcacataccgagtagagctgaaggagagcacacccttaaacacacgcttcttg
caagtgcgagctgtaaaccgagatggtggcatcaccactggagtgtcttctacgttttcc
accccactagcctaccacttgcacccagacagtgacgctgcagggtttggcattgtgtct
gatagcggctggttgtttgtgaagagcaccctggacagagaagccaaggagatgtatctg
ctcacagtgctggccacgtcaggcaataggcagttgaagaagacaggtagtgccacagtg
cgcgtgtcagtgatggatgaaaatgacaactctccgcggtttacccaggagagagctttc
ctggctgtgcgtgagaacctgccggcagggactggatttggtcgggtgtctgccagtgat
cgggatgcaggtctcaatggtcgactgagttatcgcctgctccatctggatcgccacttc
cagatcaactcccacacaggtgagataagcacaagaatttctcttgaccgtgagcttcag
tccagctaccagcttatcgtggtgggtcaggatggtggaactcccccacacagtgctaca
agcactgctttcatcacagttctggatgagaatgacaatgccccctccttcactcacgct
caggcaggaagagagctcttgctgcaggtgttggaaggtcagccttctggatttctgttg
ggtactatttatgcaagagatcctgatgagggggaaaatggaactattttctattctatg
tcaggtcccagagcagaacgtttttctcttaacccaaacaccggagagctgcggttctcc
tcccctttgagccactctgagcgacctgagtacagtttcactattatggcctctgatcgt
ggttcaccccctcagagctccaccacagcattgaaaatacaggttctcagttcaagcaaa
gggtcgtccacctctaactcccagttgttaacgttgaattctgtggagggtgctaaacct
ggctccattgttggatctgtgcgatcacctgattctcagacccttcctgaagaaggcctg
gtcacgtataccgtagtaggaggcacagactgtgatggaacctttgtggtagaccgccag
acgggtgacgtttacctggcccaggagcttgactttgaaaaagctcctcaatacaccctt
caggttgaagtggatgacatttccatgcccctgcctaaaagtcattttgttacattggta
attgatgtccaggacagcaatgatcatgctccccagtttcccgaagaccccatcaccatt
gtcgtacctgagaacacagagcctgggtccactatctacaccttccaggctattgataaa
gatggaagtggacccaacagcgaagttcactattcagtccttcaacagtggccaaacagt
ccagacattctgttactggatcctactacaggagttctgtctttggggaagatgttagac
catgaaagaacctcctctcttctcttggtggttcaggcgaccgattcagcccctgatgtc
agccaacgaaggcgtggaacggtcactgcccgtgtctttgttactgatgtgaatgacaac
gagcctgtcttcatctcaccatctgtagtgagtgtgatggaagaccaacctgtgggcttt
gtcatagtctacatcatggctgttgatgctgaccagggtgagaacgggcgagttttgtac
cgcatccaaagtggcaatacaggggggaagttcagcctcaaccctgaaacaggatctttg
tctattcttaaaccaattgatcgtgaggagcaagacctatacaacctaaccatagtggca
gaggaccgtggtgtacagcagcactccagcagccagttactgtcaatccaggtgattgac
ataaatgatgaggcaccgtacttcgaggaaagtgaatatgaagcttttatagcagaaaat
cagcctgcaggaaccactgtgctggtggtttcagcttcagacttagatcaaggaacaaac
ggaattgtgacatacggaagcattgtaggagatgagttcagcatccatccgatgacagga
gtcataacaaccaccaaagccttggacagggagacccaagggttttatactgtgacagtt
tatgccagagatggtggttctccacccaatttcactaagaccagagtgcgtgtcacagtg
ctggatgagaatgacaatagaccagtctttgggagagtgtactacagcttggaggtgcct
gagaaccaagagcctgtgaatctcattacaatcagagccacagatcacgactctggggac
agtggggtggtgcactacaaaatcactgagggagaccattttggtgatttccacttggac
aggaaatctggtgtgctgtccacttctaggcttttggaccgagaatccaaatcaggatac
actctcactgtggaagcacaagataagggtacaccatccctcaccaccactgtgactttg
gatatcaatgtcttggatctgaatgacaacagcccagtgttccctagcagcagctactct
gtggagattttagaagatgccccagatggttcttttgttctggatgtttcggcctcagat
caggatatagggtccaatagcaagttggtctacttcctgagccccgagtccagaggtatg
ttcattgtggaccaacacactggtcgcatcataacagcggcagctcttgacagagaaaag
gtggccacctacagcttccaagtctacgctatggactcctcagcctccaacccccataac
acatctgctcaggtgactgtccacatcttagacataaacgacaatgccccctatttcgtc
atggacccgctcatcataaatgtctccagcactagtatttccaaccacaaagtgttggcc
actatgagagctgaagataaagactttggtgcaaatggatctgtattttatcggttcgct
agcccagtcaaaggcttcaccataaactctttgacaggggccatccaagccactgagaag
ctccatgcactgacccaaagccagcggactcttattgtggtggccatggatcagggtaac
ccatcgcagtcctctctgggagtggtggtcgtgtacatcagagagcagagttaccagggc
atccgcttctctcgcaacgctagagatgtcaatctgcaggagaatgctgccaaaggtaca
gcagtagttcaaatacaagctcgttatcctgatggctctagcagtggcatcaactacagc
attttcagtggtaacaagcagcagtcctttagcatcagcccccacacaggtgagatttgt
gttgagagctccacaggtctggactttgaggagacccctcgactccgcctggtggtcaag
gcagaaaccgcatcttccagctctttcatggcagtcaaccttctcctgcaggatgtcaat
gacaacttaccacgttttcagcttcacaactatgttgcttatgttcgcgaggcccaggga
tatgatcaccctatcattcaggtgctggcggatgacctggaccagggtcagaatgggcag
gtgacctactccataaggtcatcatccatgagcagcctttttaagatagaccctgtcaca
ggcagtatatccactgctgccatcatggacagagagatctggacacagaccaatcttgtt
attacggcaacggacagaggcacccctcggttagcaggttctgccactctcacggtgatc
atcatagacctgaatgacaatagtcccacaatccctgctccacgtgaagtgcgggtccct
gagaataccttgattggcactgtgatcactcaggtcacagggaacgatgtggactctggt
cctgctctgtcctactctcttctcctggactctgactctcaagggaagtttggaatacac
cgttatggaggaggagtatccttgacctcccatttagactttgaagagagaacatggtac
acactgaccatcagctcttcagactccaagcagcagactcaggcaaatctgactgtgctt
gtggaagatgtgaatgataatgctccagtcttctcccaggacctttacgaggtgactgta
gcagagcacttgccagcaggaagctcagttgtcacagtaactgctacagataaggactct
ggagagaacggaaggataacatacagggttgtgtcaacaaaagacatgttctacattgac
ccaagtaatggcactctcttcatcaaggaaaaggtttattttgactcagagcgcccttta
attttggtggtgattgaagctagcgatagtggaactcctccattgactgctcttaccact
gttcaggttcatgtgtctgatgtcaatgacaatgcccctgtattccaccagactgagtac
agagcctctgtgtctgaagatgaagttcctggttttaccattttaaccctggaagcagtt
gacggggacttatttagagataactgtggctttgattttgccattgccagtggaaacatc
ggtagtaccttccaaatggagagtagtgtgcgcttttttgaaggccatggatttcagact
gtcggaacgctgatcttagttgataagcttgactttgagattgtcaatttctacaatctt
actattgtggtctcagaccgtggaatcccacagcaaagctctagtgtcccagtgctgatc
agtgtaacagacaccaatgataacccaccagccttcagcaaggtggagtacaacattgtc
gtcaatgagggggcagaaaccggaacagagatacttcaactttcagctctagatcctgat
ttaacacctaacagagatgttcagtattcgatcagttctggggatgaagctgagcttttt
tctgtagaccggtggactgggtccctttgtctacagagatctctagatagtgagcgacag
tcctctcacatgctcatcatccaggcctcggatggtcagggccactttgcacttgcccct
gtaactgtaaaagtcaagaacatcaataataactggccttacttccctctcaaaacacta
acagcaagcattcgtgaaaaccagccccaaaatgctctagtaaccatactacatgccatc
gatcatgacaaaggagcgtatggggagctgagatatttcctaatgtacaattcaggcaat
ggtaaagattccttcctagttaaccaaacctctggtgaggtacgaacccatttcacattt
gactttgagaaggtaaacactttcaattttatcgccctggcaatggatgcaggcaactac
tctgctacggtcacagtccaggtatttgtgacaggtgaagatgagtatgaccctgttttc
actaattcagactttgcctttcatgtacctgatggtgccaagaaagggcaaagcattggc
cgggtgattgctaaggatgaggatggaggggtagacggtattgtcctatacactctcgca
aacagttctccttactttgaggtcaacacatctactggggtgatatccctgaagatggat
gcctatcatcgacatgatagccggtccaaaagggagacacgtgagatgacattggatgtt
attgcccacagtcctttagagaactcgcgcacagcttctgcacacatcaccattgatgtc
acccatacatcttttggcttggccaaagacataaatgtggtccttgccagtacaatagca
gcttccttggcagccattgtggtcttgatcataactgttgtggtgatctttctcttgaga
tcccaaaggttcaaagatcaagaaacatgcaccaggatagtcacccatggtaccgttctg
caaagccttgaagattcgaaagttccagggagtgataagctctaccatcagacccttgct
gggtatgcagctagtcagaccggaaatggaggtgctgcctatacacgaggtgggtcgctt
gatccatcccactcaagtggacgtggctcagccgaagcagaagctgcagaggacgatgag
attcggatgattaacgagtatccacaagtttccagcatttcttcctccatgcaggaacac
atagctgctcgagggcctgactcggggatccagcaagatgctgatcagctgtctgacatc
tcctgtgagccagggatggatgcaaaccaatggtttaaagggaaaaagttggcaagttta
agtggaacattagcaagccagctgccatcttatcgggatgagggaggtgggtatctcggg
gttggaagagggcttagcctctcacatccaaaagattacactttcccagaggatggaaag
cctactgttgatggttctctcacagcaatcattgctagtgatgaggaattgaggggcagc
tataactgggattatctcctcaactggtgccctcagtttcagcctctggctaacgtgttc
actgaaattgccagattaaaagatgagaatgcgccacctaaccctcggcggtcttttcag
cacaaaacaaagactgatcccaagcctagaattgacccccctccccttattacctctgta
gctcatccaggggctaaaactgttcatccaaaacctgctgttgggcgaacatttccccac
ttgtctttactgcgacggtcgcccattgaccatgatggctctgtttcctcaatagccatg
tctccaagtttctctccgtcactgtccccacttgctgcccattccccagccatctgtcct
tatggagtcacgcaaggtcactcttcctccattatcaataccactgaacactcgctagaa
catgaggagacagaaatgaggatataa
DBGET
integrated database retrieval system