Myxocyprinus asiaticus (Chinese sucker): 127429712
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Entry
127429712 CDS
T08782
Name
(RefSeq) high mobility group protein B1-like
KO
K10802
high mobility group protein B1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03410
Base excision repair
masi04140
Autophagy - animal
masi04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127429712
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127429712
09143 Cell growth and death
04217 Necroptosis
127429712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
masi03036
]
127429712
03400 DNA repair and recombination proteins [BR:
masi03400
]
127429712
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
masi04147
]
127429712
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
127429712
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
127429712
MMR (mismatch excision repair)
Other MMR factors
127429712
Exosome [BR:
masi04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
127429712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
127429712
NCBI-ProteinID:
XP_051534779
LinkDB
All DBs
Position
39:11689512..11694057
Genome browser
AA seq
197 aa
AA seq
DB search
MGKDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFE
DMAKQDKVRYEREMKNYIPPKGEKKRRFKDPNAPKRPPSAFFIFCGDYRPKIKGENPGLS
IGDIAKKLGEMWNSSSAEVKQPYEKKAAKLKEKYDKDIALYRTKGIAGLSKKDGGEDDED
DEDEEEEDEEEEEEDDE
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagatccaaggaagcccagaggaaagatgtcctcttatgcatactttgtgcaa
acctgccgtgaagaacacaaaaagaagcatcctgaagcctccgttaacttctctgaattc
tccaagaagtgttcagagcggtggaagacaatgtctgccaaagaaaagggtaagtttgag
gatatggccaagcaagacaaggtgcgttatgagagagagatgaaaaactacatcccacct
aagggtgagaagaagaggcgatttaaggatcctaatgcgccgaagagaccaccgtcggca
ttcttcattttctgtggtgattaccgccctaaaattaagggtgagaatccaggtctgtcc
atcggagacattgctaagaagcttggagaaatgtggaacagctcatcagctgaggtgaag
cagccctatgaaaagaaagctgcaaagctcaaggagaagtatgacaaggacattgcccta
taccgcacaaagggaattgcaggcttgtccaaaaaagatggtggggaggatgatgaagat
gatgaagatgaagaggaggaggacgaggaagaagaggaggaggatgatgagtag
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integrated database retrieval system
