Myxocyprinus asiaticus (Chinese sucker): 127429721
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Entry
127429721 CDS
T08782
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04270
Vascular smooth muscle contraction
masi04625
C-type lectin receptor signaling pathway
masi04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127429721
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
127429721
09153 Circulatory system
04270 Vascular smooth muscle contraction
127429721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
masi04131
]
127429721
Membrane trafficking [BR:
masi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127429721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
127429721
NCBI-ProteinID:
XP_051534788
LinkDB
All DBs
Position
39:complement(19786989..19880652)
Genome browser
AA seq
1392 aa
AA seq
DB search
MSDSRSTVTDRTSSILSRDHLPDKRPQSDKLPGTPTHEFDPTDVLVPKSGFVVADGRPES
CGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKQDGAAMRAGVQTGDRIIKVNGTLVTHS
NHVEVVKLIKSGSYVALTVLGRPPGLPEIPLSEVDAGLGSPGGLGDNFVTSPNSSNAAER
TSSPLVPWEVNGAPYNKRMDNRRMVSREQQDIQGPKEEYGKTPTPKPLQVIQDGKKHIPQ
RQGQLNRATHEGLYVRNSEDGCWVDEDHCKGDFSPEGFWSGISVASRRFYPASPKIQRDS
NCSSPKSAPRDSLNSYCSPEAEDSSDLNSRFRCTIGSPSSRLIIHPEDDDFDIKQEQVNG
QCSCFQSIKLLKTRPAHLAAFLHHVISQFDPAPLLCYLYADLYKQTNSKETRRIFMDFLT
FFLDRGANLKVAVPESISSELERRRPELIPEELHRQYIQTMQELLLPDVQRHLEDFRQKR
SMGLTMAEVELSRLDSEQLDLEKERSCAENILSKIDDILLTSQPTEEEKCTTMQYVILMY
MKHLGVRVKEQRSLESKRVRINFLPSKLRKSSKQEKDGEEKLKKPRFPIRVPPRWPSRIE
SVPAGRGGDNVKQRPQKQMSQPALGGSEPIEGGRLRGSQSSEGSDLLQSPGFTASPPYSA
SYSSPSDPSGRDTEFSMSPSTVFPRLSDGLQSGDVLDIIYPPCDYIPYIMDQMDEDRDGE
RLLDVGTPKLIRRFEEHQSEDDQGSDVYSDVDPPNWQQLVGRDVLAGLTPHEIKRQEVIN
ELFYTERAHVRMLKVLDSVFYQKLTRDNILPPADIKNIFTNLEEIVQLHMRIADQMTVIR
KKNESSVIDQIGNDLLYWFSGGEEEQIKQAVSTFCSNQPFALELIKSRQKKDQRFNTFMQ
EAESNRRCRRLQLKDIIPAEMQRFTKYPLLMDNIAKYTDDLEEKDKVRRAAECCRKILNH
VNQSVRESENKQRLEDYQRRLDLSSLKQSENPMISEFKNLDLTKRKMVHEGPLSWKVNKD
KTIELYTLLLEDILVLLQKQDERLILRCHSKNLAGTADTKHIFSPIIKLSTVLVRSVATD
NRSFFVISMSENGAQIYELMAQTVSEQRIWQQQITHRADVMKATLHSVIPLPQHDGDRDS
VELSKFSKGSERISTGSIQSAEKDSDFSPSAALQDCVPDSNPGGEDQVQRVSREGSYLDS
ELLNGRDADPLSCSPKADEALKTLAALKQVLVTQLMAQDEGERLGRSAGSRLLRTTSLRT
PVEHSSTRTPSRAQDYTSGDTGFYECPEDYAAYLVLEGYGGSGESSTDDDIQVGRKEPSL
AHSCAADSGISLKFSSPSSGSTSRLSRQVLSHLRSLQANLNHLKDMETKYYNLLRQRSVG
SSTDTDVGRDKK
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactcacggtccacagtcaccgacagaaccagtagcattctcagcagagaccat
ctacctgacaagaggcctcaaagcgataagctgcccggtaccccaacacacgaatttgac
cctacagatgtgctggtgccgaagagtggatttgtagtggctgacgggagacctgagtct
tgtgggctggttcagagatgtgtaatcattcagaaagatgagaatggctttgggctgaca
gtcagtggggacaaccctgtttttgtgcagctcgtcaaacaggatggtgctgccatgcgt
gcaggtgtccagactggggacaggatcattaaggtgaacgggaccttggtgacgcattct
aaccatgttgaagtagtgaaattaatcaaatctggctcttatgtggccctcacagtatta
ggccgacctcccgggttgcccgagatacccctttctgaggtagacgcaggccttgggtca
ccggggggtcttggagacaactttgttacatcccccaactcttccaatgcagcagagcgc
acctcttctcctcttgtaccatgggaagtgaacggtgctccatacaacaaaagaatggac
aacagaaggatggtgtctagggagcaacaggacatacagggaccgaaggaagaatatggc
aaaactcctactcccaaaccacttcaggtcatccaagatggcaagaagcacattccacag
cggcagggccagctgaacagggctacacatgagggtctatatgtcaggaacagtgaagat
ggttgctgggtggatgaggatcattgtaagggagacttcagcccggaaggattctggagt
ggaatttcagtggcatctcggcgattctacccagcctctccaaagattcaaagagactcc
aactgttccagtccaaagagcgcccccagagacagcctcaactcctactgctctcctgag
gccgaggatagctctgacctgaattctcgcttccggtgtaccataggcagcccctcctca
cgcctgatcatccaccctgaagatgatgacttcgacatcaagcaggagcaggtgaacggc
cagtgcagctgcttccagagtatcaaactgctcaagactcgccctgctcatcttgctgcc
ttcctgcatcatgtgatctcccagtttgaccctgcacctctgctctgctacctgtatgct
gacctctacaagcagacaaattccaaagaaactcgtcgcatattcatggactttttaact
ttcttcttagaccgtggggcaaatttgaaagtagctgtgcctgaatctatctcctctgag
ctcgagcggcggagaccagagctgattcccgaggaattacacaggcagtatatacagaca
atgcaggaattgctcctccctgatgtacagagacacttggaggatttcaggcagaagcgc
agtatgggcttgacaatggctgaggtagagctgtctcgtctggactctgaacagctcgat
ctggagaaagagagatcatgtgcagaaaacatcctctccaaaatagatgatatcctattg
acttcacaacccacggaagaagagaaatgcaccaccatgcaatatgtgatactcatgtac
atgaagcatctgggagttcgggtgaaagagcaaagaagtctggagtccaaacgagtccga
attaattttcttccttcaaaactgaggaagagtagcaaacaagagaaggatggagaggag
aagctgaaaaagcctcgcttccccattcgagtgcccccaaggtggccgagtcgcatcgaa
tcagtaccagctgggaggggaggggataacgtcaagcagaggcctcagaagcagatgtct
cagccagcgctgggtgggtcagagccaatagagggtggacgtctgcggggcagtcagtca
agtgagggttcagacctcttacagagcccaggattcaccgcctcacccccatacagcgca
tcctacagctcaccatcagatccctctggaagggacacagagtttagtatgagtccatct
acagtgtttccccgactgagtgatgggctgcagtctggagatgtgctggacatcatctac
ccaccctgtgactacatcccatacatcatggaccagatggatgaagatagagatggagaa
agactccttgatgtgggcacacctaaactgattagaaggtttgaggagcatcagagcgaa
gatgatcaggggagtgatgtgtactctgatgtagatcctcctaactggcagcagctggtc
gggcgtgatgttctagcaggcctgacaccccacgagatcaagagacaagaagtcattaac
gaactgttctacacggaacgagctcatgtgcgcatgctgaaagtcctggacagtgtgttc
taccaaaaactcacccgagacaacatactgcctcctgctgacatcaaaaacattttcacc
aacctggaggaaattgttcaactgcacatgaggatagcagatcaaatgactgtgatccgc
aagaagaacgagtcgtcagttattgaccagattggaaatgatttactgtattggttcagt
ggtggagaagaggagcagatcaagcaagcggtgagcacgttctgtagtaaccagcccttc
gccctggagctcatcaaatcccggcagaagaaggaccagcgtttcaacactttcatgcag
gaggctgaaagcaatcgacgatgtcgaagactacagctaaaagacatcatccccgcagag
atgcagaggttcaccaaataccctttactgatggacaacattgccaagtacacagatgac
ttggaggagaaagacaaagtaagaagagcagctgagtgctgtcgaaagattttaaaccat
gtcaaccagtccgtgagggagtccgagaacaaacagagattggaggactaccagaggcga
ctggacctttcttctttaaagcagagcgagaaccccatgatctcagagtttaagaacttg
gatctcactaaacggaagatggtccatgagggtcctttgtcctggaaagtgaacaaagac
aaaaccattgagctgtacacgttactcctggaagacatcctggtgctgctgcagaaacag
gacgagcgtcttattctcaggtgtcacagtaagaacctcgcaggaactgctgacaccaaa
cacatattcagtcccatcatcaaacttagcactgtgctggtgcgctcagtagccacagac
aacaggtcattctttgtgatctccatgtcagaaaacggagctcagatctatgagctgatg
gcgcaaacagtgtctgagcaaagaatttggcagcagcagatcactcacagggcagatgtt
atgaaagccacactccacagcgtcattcctttacctcagcacgatggggacagagacagt
gttgagttaagcaagttcagcaaaggctctgaacggatctccacaggaagcatccaatct
gcagagaaggacagtgatttttctccctcggcagcactgcaagattgtgttcctgactct
aatcctggtggagaggatcaggtccaaagggttagccgagaaggctcctatctggactcg
gaactcttgaacggcagggacgcagaccctctctcctgttcacctaaagcagatgaggcc
ctgaaaaccttggcagcactgaagcaggtgctggtgactcaactgatggctcaagatgag
ggtgagcgattgggccgatcggctggcagtcgcctcctcaggaccacctctcttcgaacg
ccggtggagcatagctccactcgtacccctagccgagctcaggactacacctctggagat
acaggcttctacgagtgcccagaggactacgcagcttatctggttctggaggggtatggt
ggctcaggggagagcagtaccgatgatgatattcaggttgggagaaaggagccgagttta
gcccacagctgtgctgctgactcaggcatcagtctcaagttctcctcaccctcctcgggc
agcacgtctcgtctcagcagacaggtcctctcacatctccgcagcctgcaggccaacctc
aaccacctcaaggatatggaaacgaagtattataatctgcttcgccaaaggtcagttggg
tcatccacagataccgacgtgggcagagataagaaatag
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