Myxocyprinus asiaticus (Chinese sucker): 127429840
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Entry
127429840 CDS
T08782
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127429840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
masi04515
]
127429840
Cell adhesion molecules [BR:
masi04515
]
Immunoglobulin superfamily
ROBO family
127429840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
Ig_C17orf99
Unc5_NetrinR_N
Ig_4
FN3_DSCAM-DSCAML_C
Ig_PDGFR_d4
DUF7908
Motif
Other DBs
NCBI-GeneID:
127429840
NCBI-ProteinID:
XP_051535075
LinkDB
All DBs
Position
39:complement(6504151..6857697)
Genome browser
AA seq
1666 aa
AA seq
DB search
MQITWSGATPLVIFTLLQFVQSELLEGPLVLDTGTQEGTSNRVTEVPTAKHDDDNSLGYT
GSRLRQEDSAPRIVEHPSDLIVSKGEPATLNCKAEGRPSPTVEWYKDGERVETDRDNPRS
HRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEVAILRDDFRQNPV
DVMVAAGEPAVMECQPPRGHPEPTISWKKDGVTIDDRDERITIRGGKLMITNTRKTDAGK
YVCVGTNMMGERESEIAELTVLERPSFLRKPSSQSVLVDQSVEFRCEAHGDPVPTIRWRK
EDGELPKGRHEIWEDHTLKLKRLTSGDAGTYTCQAENMMGKTEASATLTVHVPPVFVVRP
RNEVAGMGRTVTFQCEATGSPQPAIFWQKEGSQNLLFSSQPPPPSSRFSVSQTGDLTITA
VERSDGGYYSCQALNIAGSVITKVLLEVTDVISDRPPPIVRQGPTNQTVAVDGTVVLGCQ
ATGTPTPTILWRKDGVLVSTHDSRLKQLDTGSLQIRYAKLGDTGIYTCTASTPSGEASWK
AYLEVQEFGAPVQPGRPTDPNLIPSAPSKPEVTDVSRTSVSLSWKPNLNAGATPTSYIIE
AFSHVAGSSWQTLADHIKTESFVLKGLKPSAIYLFMVRAANAYGLSDPSPISDAVKTQDI
PPTSQGVDHGQIQRELGDVVIHLHNPTILSSSSVRVQWTVEQQSQYIQGYKVMSRPSLEG
AQQHVEWAVLEVRIPGEHSAVVTQLRKGVTYEFKVRPFFNEFQGTDSDIKVGKTLEEAPS
AAPREVTVTGSGDNGTAILVTWHSPPEEEQNGVVQEYKIWCLGNESRYHINRTVDGSTFS
VVIPGLVAGVPYRLEVAASTGGGPGVKSEATSFQLDSSGRIVSPLDVENTISQQISDVVR
QPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIRKVPSFTFTPTVSYQRGGEA
VSSAGRPGLLNIGEPATQPWLADTWPNSCSNHNDCSINCCTGSNGNSDSNLATYSRPADC
IANYSNQMDNKASNLLAPDTGLYSDIDLSDKINEMKTFNSPNLKDGRFVGPCGQPTPYAT
TQLIQSSLANNNVNSSSVGSGGGSADLNEKQSWKGSQGTPQKQSDINAPLQYNVMEQNKL
NKDHYRGEGPISVTIPYNQAQDTHTGGTYSSSDRGSSNSGSQGQKKGGRTSKQAKQNTMN
WTELLPPVNPPPCQEYTLPMDDSYDTDLQCPLPPSRMYLQPDELEEEEVELERGPTPPVR
GAASSPAAVSYSHQSTATLTPSPQEEMQPMLQDPDGLHERRRLLVSPPPPPRPLSPPHTY
GYISSPLGLDTDGLEEEEDEEEGDETDAEVARVHQHHTHPHQQHLAQQRALLRGLEQTPA
SSTCDLESSVTGSMINGWGSASEEDNASSGRSSAISSSDGSFFTDADFAQAVAAAAEYAG
LRVAKHSGKGHHQLPVSGAAARKYQNLPLGHRPGSPVSTDSNVSATPGQRRPLKRQKQHP
ASQTGYQRREVYTEDLPPPPIPPPAMLKSPTHPAKTIPEGPRGAMSPISSSADVKDRRTE
RREAQDLQRGQRTGKSSKQEAGAAAKSRQHPGSEDILPYSRPSFPAVHSPRGERDPSSSS
SLSSRGSGGRRRGEGPPGARRNPADIGLNTTGAFQTGGEELEMVES
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacatggtcaggtgccacacccctcgtcattttcaccttgttgcagtttgtc
caatcagagctgttggaggggcctttggttctagacacggggactcaggaggggactagc
aatagggtcacagaggtcccgactgcaaaacacgatgatgacaactctctgggctacaca
ggatcccgtttgcgacaagaagactctgcaccccgcatcgtggaacacccctctgatctg
attgtatccaagggtgagcccgccaccctaaactgcaaggcagaagggcggccctccccc
accgtggagtggtacaaagatggagagcgtgtggaaacagaccgggacaaccctcgatcc
caccgcatgctcctgcccagcggctctctcttcttcctgcgtatcgtacacggccgtcgc
agcaaacccgatgaaggctcctatgtttgtgtggctcgtaactacctgggagaagctgtt
agccacaatgcctcactggaagtagctattctccgtgatgacttcagacagaaccctgtg
gatgtaatggtggcggcaggtgagccagcggtcatggagtgccagccgccccgtgggcac
ccagaacccaccatatcctggaagaaagatggtgtcaccatagacgacagagacgaaagg
attacgatacgaggtggaaaactaatgattacgaataccaggaagacggacgcgggaaaa
tacgtttgcgtgggaaccaacatgatgggcgaacgagagagtgagatcgcagagttgacc
gttctcgagaggcccagtttcttgcggaagccgagcagtcagtctgtgctggtggatcag
agtgttgagttcaggtgtgaggctcatggagaccccgtgcccaccattcgctggaggaaa
gaggatggagaactgcccaaggggcggcatgagatctgggaggatcacactctcaaactg
aagagactgacatcaggagacgctggtacttacacctgtcaggccgaaaacatgatgggg
aagacagaggccagcgccaccctcacagtccacgttcctccagtgtttgtggtcagaccc
aggaatgaggtggccgggatgggacgcactgtgacttttcagtgtgaagcaacaggaagt
cctcagcctgccatcttttggcagaaagaaggcagtcagaacctgctgttctcctcccag
ccgccacctccatccagtcgtttctccgtttctcagacgggtgatctgaccatcacggcg
gtcgagcgttcagatggaggctactacagctgtcaggctctgaacatcgctggaagtgta
atcacaaaagtcctgctggaggttacagatgttatctcagacagacctccgccaattgtc
cgccagggtcccaccaaccagaccgtagccgtagacggaacagtagtcctgggatgccaa
gccaccggcaccccgactcccaccatcctgtggaggaaagatggagttctcgtgtccacc
cacgactctcggctcaaacaactcgacacgggatctctgcagatccgttacgctaagctg
ggagacactgggatctacacttgcaccgcatccacccccagtggagaggcgtcatggaag
gcttacctggaggtgcaagagtttggtgctccggtccagcccggcagacccacagatcca
aacctaatccccagtgccccttccaaaccagaggtcacggatgtcagtcgtacttctgtg
tctctgtcctggaagcccaacctcaatgctggggccactcccacctcttatattatagag
gccttcagccatgtggcgggtagcagctggcagacgcttgcagatcacataaagacggag
agttttgttctgaaggggctcaagcccagtgccatctacctgttcatggtgagagcggct
aatgcgtacggcctgagtgacccaagccccatcagtgacgctgtcaagacacaagacatc
ccaccaacgagtcagggtgtggaccatgggcagatccagcgggaactgggggatgttgtc
attcacctccacaatcccacaatcctctcctcatcttctgtcagagtacagtggacagtg
gagcagcagtcgcagtacattcagggttataaggtgatgtcccggccatccctggagggt
gctcagcagcatgtggaatgggccgtgcttgaggttcgaatcccaggggagcacagcgca
gtcgtcacgcagctcaggaagggcgtgacctatgagttcaaagtacgacctttcttcaac
gagttccaaggaaccgacagcgatatcaaagtgggcaagaccctcgaagaagcacccagt
gcagctcccagggaggtcactgtaacgggaagtggagacaacggcacagctatcctggta
acctggcattcgcccccagaggaggagcagaacggcgtggtgcaggagtataagatctgg
tgtctcggaaatgaaagccggtaccacattaaccgcacagtggacggttctacattctcg
gttgtcattccgggcctggtcgctggggtcccgtacaggttagaggtggctgctagcaca
gggggtggtcccggggtgaagagcgaagccacatccttccagctggactcttcgggccga
attgtttcgccgttggatgtggaaaacacgatttctcagcagatctcagatgtggttcgg
cagccggcgttcatcgctggcattggtgcggcatgttggattattctcatggtcttcagt
atatggctgtatcgtcaccgtaagaagaggaacggcctcagcagcagctacgctggtatc
cgcaaagtgccctccttcaccttcacaccaacagtgtcctatcagagaggaggagaggct
gtgagcagtgctggaaggccaggtttgttgaatataggtgagccggccactcagccctgg
ctggcggacacctggccaaacagctgctccaatcacaacgactgctccatcaactgctgc
actggcagcaatggcaacagcgacagcaacctggccacctacagtcgcccagctgactgc
atcgccaactacagcaaccagatggacaataaggccagcaatctcctggctccagacacg
ggtctctacagtgacatagacctctcagataagatcaatgagatgaagacattcaacagc
cccaaccttaaggatgggcgttttgtggggccctgcggtcaacctacgccctatgccacc
acccaactcattcagtccagcctggccaataacaatgtaaacagcagcagcgtaggaagt
ggaggaggaagtgccgatctcaacgagaaacagagttggaagggcagccagggaacacct
cagaaacagtctgacattaatgcacctcttcagtacaatgtcatggaacaaaacaaactg
aataaggaccactaccgaggtgagggccctatctcggtcaccatcccctataaccaggcc
caggacacccacaccggaggcacctacagcagctcggacagggggagcagcaactctgga
agtcaaggacagaaaaaaggggggcggacatctaaacaggccaaacagaacacaatgaat
tggactgaactgctgcctccagttaatccaccaccatgtcaggaatacaccctaccgatg
gacgacagctatgacacagatctccagtgccccctcccgccttctcggatgtacctgcag
cctgacgagctagaggaggaagaggtggagctggaacggggacccacgccacccgtgaga
ggagcggcctcctcccctgccgctgtgtcctatagtcaccagtccaccgcgaccctcacc
ccgtctccacaggaggagatgcagcccatgctgcaggacccagatggtctacatgagcgc
agacggctcttggtaagtcctccgcctccgccacgccccctttcccctccgcacacgtac
ggctacatctccagcccacttggtttggacacggatggcctggaggaagaggaggacgag
gaagaaggtgacgagacggatgcggaggtagctcgggtccaccagcaccacacccacccg
caccagcagcacttagcccagcagagggctctcttgcgggggctcgagcagaccccggcc
tccagcacctgtgatctggagagctccgtcactgggtccatgattaacggctggggctcg
gcttcagaggaagataacgcttcatcgggtcgatctagcgctattagctcatcggatggg
tcttttttcaccgatgctgatttcgcccaggcagtggcggctgcggccgagtatgctggg
ctacgagtggcaaaacattctgggaaaggccatcatcagctgccagtctctggagcagca
gcacggaaataccaaaacctccctctgggacaccgtccaggcagcccagtgtcaacagac
agcaatgttagcgcaactccaggtcagaggaggcccttaaagaggcagaaacaacatcca
gcttctcagacaggttaccagcgcagagaggtctacacagaagacctgcctcctcctccc
attcctcccccagcaatgctgaagtcacctacacacccagctaaaaccatccctgagggc
ccacgaggggccatgtcccccatatccagttctgctgatgtcaaggaccggcgaacggaa
cggcgagaggcccaggacttacagaggggtcagagaacaggcaaaagcagcaagcaagaa
gccggtgccgctgcgaagagccgccaacatccagggtcggaggacatcctaccttatagt
cgtccctctttcccagctgtccacagtcctcgtggggaaagggaccccagttcctctagt
tcactgtcctctcgggggtccggcgggcggcgacgaggagaggggcctccaggggcccgc
agaaaccctgcagatattgggctgaacaccacaggagccttccagacaggaggggaggaa
cttgagatggtggagagctga
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integrated database retrieval system
