Myxocyprinus asiaticus (Chinese sucker): 127429927
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Entry
127429927 CDS
T08782
Name
(RefSeq) autophagy-related protein 16-1-like isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04136
Autophagy - other
masi04140
Autophagy - animal
masi04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127429927
04136 Autophagy - other
127429927
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127429927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
masi04131
]
127429927
03029 Mitochondrial biogenesis [BR:
masi03029
]
127429927
Membrane trafficking [BR:
masi04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
127429927
Others
Specific organelles associated proteins
Auto phagosome
127429927
Mitochondrial biogenesis [BR:
masi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
127429927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
ATG16
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_ACSF4
Tricorn_2nd
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_WDR41
Ge1_WD40
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_WDR19_1st
KASH_CCD
PUMA_CC
Uso1_p115_C
EXOC6_Sec15_N
Beta-prop_DCAF12
DUF4472
NET2A
DUF6212
Mobilization_B
Motif
Other DBs
NCBI-GeneID:
127429927
NCBI-ProteinID:
XP_051535251
LinkDB
All DBs
Position
39:complement(2677693..2705689)
Genome browser
AA seq
621 aa
AA seq
DB search
MAGRGVECLWKRHVIEELKQRDRVQRQAFEEIIHQYNRLLERSDFQAVLSERLHTEKYEQ
QNRQDLSPGVDGGRSDSLQQEMAQMRIKHQEELTELHKKRGELAQSVIELNNQIQQKDKE
IQSNESKMLEYQQQISHLEGECRELRNCLADLERANQTLRDEYDALQITFGALEEKLRKT
TEDNQELVSRWMAEKAQEANKLNAENEKDRKRRQAKLQKELADAAKEPLPIDPDDDIEVL
PEDAGKGTGETSPSRQISRTPSKRSSQALPPSGLLDSISNIFGLSDSVQPGFIPSDSRRR
RSMNSFGTSTETAEVPSPCTDVRVPSTALHIFEAHDGEVNAVRFGPGSRLLATGGMDRRV
KLWEVISGHCEPKGVLTGSNAGITSVDFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTG
HSGKVLSARFLLDNARIVSGSYDRTLKLWDLRSKVCMKTVFAGSSCNDIVCTEQCVMSGH
FDKKIRFWDIRAESTVCELELLGRVTSLDLNHDRTELLACSRDDHVKIIDLRCNAVRQTF
SAEGFKCGSDFTRVTFSPDGSFVAAGSSDGVLYIWNVLTGKLEKTLDKGHSSTINSVSWS
PSGAYVASVEKGSKAVLWSDM
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcgcggagttgagtgtttatggaaacgacacgttatcgaggagctgaaacag
agagacagagttcagcgtcaggcctttgaagagattatacaccaatataaccggctgttg
gagaggtctgatttccaggctgttctgtctgaacgtctgcacacagagaaatatgagcaa
cagaacagacaagaccttagtccaggggttgacggtggtcgtagtgactctctgcagcag
gagatggcgcagatgagaattaaacatcaagaggaactcacagaactacacaagaaacga
ggagagttggcccaaagtgtgatcgaactaaacaaccagattcagcagaaagacaaagaa
atccagagcaatgaatccaagatgttggagtaccagcagcagatctctcatctggaggga
gagtgtcgcgagcttcgtaactgtcttgctgatctggaacgagccaatcagacgctgcga
gatgagtatgatgccctgcagatcacatttggagcactcgaggagaaactacgaaaaacc
acagaggacaatcaggaactggtgtctcgctggatggcggagaaagcccaggaggccaac
aaactcaacgctgagaatgagaaagaccgcaagcgcaggcaggcgaagcttcagaaggaa
ttagcagacgctgcaaaggaaccgcttccaatagacccagatgatgacatcgaggttctc
ccagaggatgctggaaagggaacaggtgaaacgtcaccgagcagacagatcagccgtacc
cccagtaagcgctcgtctcaggctcttcctcctagcggtctgctggattccatctctaat
atattcggcttgtctgattctgtccaacctggtttcatcccgtctgactccagaagacgt
cgttctatgaactcattcgggacatctactgaaaccgcggaagtgccatcgccgtgtacc
gatgtccgtgttccctcaactgctctgcacatctttgaagcccatgatggagaagtgaac
gctgtgaggttcggtcctggttctcgtctgctcgccacaggaggaatggaccgccgagtc
aaactctgggaggtcatatcagggcattgtgaacccaaaggagtgctgaccggcagtaat
gccggaatcaccagtgtagactttgatagtgcggggtcgtatctattggccgcctctaac
gattttgcgagcagaatttggactgttgacgactacagactgcggcacacgctcacaggc
cacagtgggaaggttttgtcagctcggtttctcctcgacaacgctcgaattgtctccggc
agctacgacagaacgctgaagctctgggacttacgcagcaaagtctgcatgaagacagtg
tttgctggctccagctgtaatgatatcgtctgcacagagcagtgtgtgatgagcggacac
tttgataagaaaatccgtttctgggacatcagagcggagagtactgtatgcgagttagag
ttgctgggacgtgtaacatctttggacctcaatcacgaccggacggagcttctggcgtgt
tcccgtgacgaccacgtgaaaataatcgatctgcgctgtaatgcagtgcgacaaacattt
agtgctgaaggttttaagtgtggttctgactttaccagggtaaccttcagtcctgatggg
agttttgtggcagccggatcttcagacggtgttctgtacatttggaacgttctaacgggc
aaacttgagaaaactcttgataagggtcatagttctaccataaattcagtgtcctggtct
ccatcgggggcgtatgtggccagcgttgagaaaggcagcaaggccgtgttgtggtcggat
atgtga
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