Myxocyprinus asiaticus (Chinese sucker): 127430261
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Entry
127430261 CDS
T08782
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04137
Mitophagy - animal
masi04140
Autophagy - animal
masi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127430261
04137 Mitophagy - animal
127430261
04148 Efferocytosis
127430261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
masi03000
]
127430261
Transcription factors [BR:
masi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127430261
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1
PAS
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
127430261
NCBI-ProteinID:
XP_051535905
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All DBs
Position
39:17027430..17046932
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AA seq
664 aa
AA seq
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MLSTRSTLCYLWSKIQFLCKVCIHLNSTWIGTHALLKKRPSLEQRKVRSRDAARCRRSQE
TDVFYELAHSLPLPRRIASHLDKAAIMRVTLSYLRMNRLIQSAGSTKTQSHEETEDPTDG
FYQQALAGFVMVMTEEGDMVFLSESVGKYIGITQLELLGQSVYEFVHPCDQEELRDILTT
RPGLSKKKMVKLTEHNFFLRMKSTLMHTGRTVNIKSATWKVLHCTGHIQTLSSEDESSTP
GGSFLTLLCEPIPHPSSVEFPLDSSTFLTRHNMDLTFTQCDGRVTELVGYEPDDLIGRSA
YEFYHALDFDHVTRSLHILFSKGQVCTSHYRFLAKNGGFVWTETQATILYNSKTSQPEAV
VCLNFILSGVEQADVVFSLEQTSDKPLPKAVKLSLLEEEDSDMEVSSTAELFLQMKENPE
ELLQLAPHSGDTIISLTDGVDLSFCRPPSPNGIPECPQDLCTPELRQLLSPIFDKPSNSP
HAASPAEELPVEMDGVEKFFALKPAESVTLKGQTENMDELDLDMLAPYISMDDDFQLTFL
PQCPETVTSSPEMLTNTSRKRCLEDEEDDDIPALAAKLEKREMSSSIEERLLLSHTLLNG
LADNDGTEEFEPPPQKRSQLLTDRDPLLGGVQALCDTAALMRDTFFSRPPDLLRPVAETT
STLT
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgctttcaactcggtcgactctgtgttatttatggtcaaaaatacaatttttatgtaag
gtttgcattcatttgaattcaacatggatcgggactcatgcacttctaaagaaaaggccc
agtttggagcagcggaaggtgcgttcgcgagatgcggcacgctgtaggaggagtcaggag
actgatgtgttctacgagctggcccactctctacccctcccacgacgtatcgcctcccac
ttggacaaagctgccatcatgagggtgacgctcagctatctgcgcatgaaccgcctgatc
caatccgcaggttcaaccaaaacacaatctcatgaggagaccgaagatcccactgatggg
ttttatcagcaggcattggctggttttgtcatggtgatgacagaggaaggggacatggtc
ttcctttcagagagcgtcggcaaatatattggcataacacagctggagctactcggacag
agtgtgtatgagtttgttcatccctgtgatcaagaagaattgcgagacatcctcaccacc
agaccaggactgtcaaagaaaaagatggtaaagttgacagaacacaatttcttccttcgt
atgaagagcactctcatgcacacaggaaggacagttaatatcaagtctgccacctggaag
gtccttcattgcacagggcatatacagactcttagcagtgaggatgaaagttcgacccct
ggtggcagcttcctgacattgctgtgcgagcccattccccacccctccagtgttgagttc
ccactagatagcagcacattcctcacacgccataacatggacctgactttcacacagtgt
gacggacgtgtcactgagcttgttggatacgaaccagatgatctgattggccggtcagcc
tatgagttttaccatgctcttgattttgatcatgtgaccaggagtttgcacatcttgttc
tccaaaggtcaggtgtgcaccagtcactaccgcttcctggctaagaatggaggcttcgtc
tggaccgagacccaagccaccattctctataacagcaagacctctcagcctgaagctgtg
gtctgcctcaactttatcctcagtggggtggaacaggcagatgtggtgttctcattagaa
cagactagtgataaaccattgcctaaagctgtcaagctgagcctgcttgaagaagaggac
tcggacatggaggtgagcagcactgctgagctcttcctccagatgaaggagaatccggag
gaattactgcagctggcaccccactctggagacaccataatttctctgacagatggtgtg
gatttgtcattctgccgtccaccaagtcccaacggtatcccagaatgccctcaggacctc
tgtacacctgaactccgccagctcctttctccaatattcgacaaaccttccaattcccca
catgctgcgagtcccgctgaagagctgcctgtggagatggatggggtggagaagttcttc
gccctcaaacctgcggagagcgtaacgttgaaaggccaaacagagaatatggatgagctt
gatctggacatgctggctccatatatctccatggatgatgacttccagttgaccttccta
ccccaatgtcctgagacagttacatcatctccagaaatgctaaccaacacttcaaggaaa
cgatgtctagaagatgaggaagatgatgacattcctgctctggctgccaaattggagaaa
agagagatgagcagctccatagaggaaaggcttctgctcagccacaccttactgaatggc
ctggctgataatgatggtacagaagagtttgagccaccacctcaaaagcgaagtcagctt
ttgactgacagagaccctctgctggggggggtgcaggctttgtgtgatacggcagcccta
atgagggacacctttttttcacgcccacctgatttattgaggccagttgctgagaccaca
tcaacccttacttga
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