Myxocyprinus asiaticus (Chinese sucker): 127430263
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Entry
127430263 CDS
T08782
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like isoform X1
KO
K07466
replication factor A1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03030
DNA replication
masi03420
Nucleotide excision repair
masi03430
Mismatch repair
masi03440
Homologous recombination
masi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127430263
03420 Nucleotide excision repair
127430263
03430 Mismatch repair
127430263
03440 Homologous recombination
127430263
03460 Fanconi anemia pathway
127430263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
masi03000
]
127430263
03032 DNA replication proteins [BR:
masi03032
]
127430263
03400 DNA repair and recombination proteins [BR:
masi03400
]
127430263
Transcription factors [BR:
masi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127430263
DNA replication proteins [BR:
masi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
127430263
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
127430263
MMR (mismatch excision repair)
127430263
DSBR (double strand breaks repair)
HR (homologous recombination)
127430263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
127430263
NCBI-ProteinID:
XP_051535917
LinkDB
All DBs
Position
39:16179129..16228896
Genome browser
AA seq
602 aa
AA seq
DB search
MTVRLSEGAIESLTKGVDVSNPVLQVLNIRKIDGGNGLSRFRLMMSDGLHTMSSFMLSTQ
LNPMAEQNQLAPNCVCSLKKSVTNVLKDGRRVVVILDIDVVKSADQMPGKIGDPTPYVEG
QSKASQSTAPAPAVQPFQLKNGSDGSMNRAPAQNFGKKPMATPSTPGGTSKVVPIASLNP
YQSKWTIRARVTNKSGIRTWSNSRGDGKLFSMELVDESGEIKATGFNKEVDKFYTLIEQG
KVYYISKGTMKIANKQFSSLKNDYEMTLNGETSIIPCEDSHDVPMVQCDFVSIANLESRE
KDTIVDVIGVCKTVEDVTRIMTKNSREVSKRNIQMMDMSGRVIQVTMWGNDAETFDGTGQ
PILAIKGARLSDFGGRSLSTLYSSTVMVNPDIPEAFKLRGWYDKEGHAIDGQSMTEMRGP
GGGGNTNWKTLAEVKNEHLGHGDKADYFSCVATIVYIRKENCLYQACPSKDCNKKVVDQQ
NGMYRCEKCDKEFPDFKYRLMLSANVADFGDNQWVTCFQDSAETILGQNASYLGQLKDSN
EAAFDEVFQHANFNTFLFRNRVKLETYNDESRIKVTVVEAKPVDHREYSKRLIIKIRKIA
AQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcagattgtcagagggggcaatagagtctctcactaaaggagttgatgtcagc
aaccctgttcttcaggtgttgaatatccgcaagattgatggaggaaatggattgtcccgt
ttccgtctcatgatgagtgatggacttcacactatgtcctcattcatgctttccacacag
ctgaatcccatggctgagcaaaaccagttggcccccaactgtgtctgttcacttaaaaag
agtgtcacaaacgtcctcaaggatgggcggcgagtggtggttattctggacattgatgtg
gtcaagtctgctgatcagatgccaggaaaaataggagatcctactccttatgtggaaggt
cagtcaaaggcttcacagtccacagctccagctccagctgtacagccatttcagcttaag
aatggaagtgatggttcaatgaacagggcccctgcgcagaactttgggaaaaagcccatg
gctactccaagcactcctggaggcacctctaaagtagtgcccattgcgagtctcaaccca
taccagtcaaaatggactatcagagcccgagtcaccaacaagagtggcatccgcacatgg
agtaactccaggggtgatggcaagctcttctccatggagctcgtggatgagagtggtgag
attaaagcgactggatttaataaggaggtggacaaattctacactcttattgagcaagga
aaagtctactacatctctaaaggcactatgaagatcgccaacaagcagttctcatctctg
aagaatgactatgagatgactctcaatggtgagactagcatcatcccttgtgaggacagc
cacgatgtacccatggtgcagtgcgactttgtttccatcgctaacctggagtcccgggaa
aaggatactatcgtagatgtgatcggagtgtgtaaaactgtggaggatgtgacgcgtatc
atgaccaagaacagtcgagaggtgtccaagaggaacatccaaatgatggacatgtccggc
agagttatccaggtcaccatgtggggaaatgatgcagagacttttgatggcactgggcaa
cccatcctggccattaagggggcaagattgtctgacttcggtgggcgttctctctccact
ctgtacagcagcacggtcatggtcaatcctgacattccagaggcattcaaactgcggggc
tggtatgacaaggaaggacatgctatagatggacagtctatgactgagatgagaggacca
ggaggtggtggaaacacaaactggaagactctggcagaagtaaagaatgagcacttaggc
cacggagacaaggctgattatttctcttgcgtcgccaccatagtctacattcgtaaagag
aattgcttgtatcaggcttgtcccagtaaagactgcaacaagaaggtggtggaccagcag
aatggcatgtaccgctgtgagaaatgcgacaaagagttccctgacttcaaatatcgcctc
atgctttcggccaacgtcgcagatttcggagacaaccaatgggtgacttgctttcaagac
agtgccgagaccatcctgggccaaaatgcatcataccttggccaactcaaggactctaat
gaggctgcatttgacgaagttttccagcatgcaaacttcaatacttttctcttccggaac
agagtgaagctggagacctacaacgatgaatctcgcattaaagtgacagtagtggaggcc
aagccggtggaccacagagaatacagcaagcggctgattatcaaaataaggaaaatagct
gcacagtag
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