Myxocyprinus asiaticus (Chinese sucker): 127430403
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Entry
127430403 CDS
T08782
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03440
Homologous recombination
masi03450
Non-homologous end-joining
masi04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127430403
03450 Non-homologous end-joining
127430403
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
127430403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
masi03032
]
127430403
03400 DNA repair and recombination proteins [BR:
masi03400
]
127430403
DNA replication proteins [BR:
masi03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
127430403
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
127430403
BRCA1-C complex
127430403
NHEJ (non-homologous end-joining)
MRX complex
127430403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
ABC_tran
AAA_29
zf-met
AAA_13
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
127430403
NCBI-ProteinID:
XP_051536087
LinkDB
All DBs
Position
40:complement(9753768..9796177)
Genome browser
AA seq
1312 aa
AA seq
DB search
MSKIEKMSILGVRSFGVEDKDKQVISFFSPLTVLVGPNGAGKTTIIECLKYVTSGDFPPG
SKGNTFVHDPKDAHETDVRAQIRLQFRDVNGEAVAVQRSMQSTQKGKKIEFKTLEGVITR
IKHGEKVSLSSKCAEIDREMISSLGVSKAVLNHVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKVLETLRQLRLKQANTVKTCQMELKYLKQNKDKAQEIRELLSTKEAQLASSKES
VQRIESQIDPLENRLNDIDDSMRKVMKLDNDIRALDSRKKQMEDDNRELEEKMEQVFQGS
DDQLQEMYQNHQQTVKEKERRLTECQREMDRAGRECQRTNRIKSDLLVEQGRLQLEADRH
TQNIKKRDTQVKNLASFLELEGCDRTPLSERQLQSFHRQVKERLDQDTDALNQTMHDMQE
KEAQKQQSIDDLRDKKTGLERTIELKRDIQAKKQQELKNIKSDLQRLEGSSDRLQELETE
LQKAERELDNAMQACTVDSLKAEVIELQREKTELDQAQRKLDQEMAVLNTHTTARTQMDM
LKKDKMDKEEQVRKIKSRHNEELVALLGHFPNKRELEDWIYTKSREINSTRERLSKLNKE
LASGEQKKSHFTAEIKRKEEQLARYEERLFNLCGSQDFEDELDKLQDELDKSSKQKAMLT
GATAVYSQFISQLTEEGEPCCPVCQRVFPSEAELQDVINDMQSKLRLVPDKLKNTEQDLE
RKGRRRDEMIALKPVRQSIMELQEKELPELRNKLQSVNRDIERLKGVIEEQETLLSTLMS
EEDTAKACLQDISLMDRYQLDLKDIDRKIAQHAARLQGVDLSRTMQQVNQEKQETQHRLD
TTCSKIELKRKLIQDQQEQIQALRSSVNEIRGEKLQISSNMQKRQQLEEQCVEFSTEIQT
LHRDIREAKEQVSPLVATLEKLQQDRQDLAERRRQKQEEGQEKINAIKEKVKNLTLLERE
ISKYIEEGKDSYKEQKETELQEVEKQLHEAEKQREKINKDMGNIRQDIDTQKIQERWLQD
NLTLRKRVEELKDVTRKREVLLKEMGNMQVQELRNERRELERKLEDLKKNRSVAVGRQKG
YEDEILRFRKELSEDQYCRAEDLYRDKMIVMRTTELANKDLDIYYKALDQTIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYVEIRSDVDENASAGVKRRTYNYRVVMVKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQR
NFQLLVITHDEDFVELLGRSNYVEHFYRIRKNQDQCSEIIKCNISSLNSYLH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagattgagaagatgagtatccttggagtgagaagttttggagttgaggataaa
gacaaacaagtgatatcgttcttcagtcctctgacagttctggtgggacctaatggagcc
ggaaaaacgaccatcattgagtgtctcaagtatgtcacttcaggagactttcctccagga
agtaaaggaaacacatttgtccacgatcccaaagatgcccatgagacagatgtgcgagca
cagatcagactccagtttagggatgtcaatggtgaagccgtggctgtccagagatcaatg
caaagtacacagaagggcaagaaaattgagttcaaaactcttgagggcgtcataaccaga
atcaagcacggtgagaaagtgagcctgagctctaaatgtgctgaaatagaccgtgaaatg
atctcatcactgggcgtttccaaagctgttctcaaccatgtcatcttctgccaccaagag
gagtccaattggcctctgagtgaaggaaaagcccttaagcagaagtttgatgagattttc
tcagccacaaggtacataaaagtgttagagaccctgcgtcagttgaggctaaagcaggca
aacacggtgaaaacctgccagatggagctcaagtacctaaaacagaacaaagataaggct
caggagatcagagagcttctgtccactaaagaggctcagttagcttcctccaaagagagt
gtccagcgcattgaaagccagattgacccactggagaatcgtctaaatgacatagacgac
agcatgaggaaagtgatgaagttggataatgacatcagagctctggacagcaggaagaaa
cagatggaagatgataaccgagaactagaagaaaagatggagcaggtgtttcagggctca
gatgatcagctgcaggaaatgtatcagaaccaccagcagacagtgaaggagaaggagcgg
aggctcacagagtgccagcgtgagatggaccgggccggaagagagtgtcagagaacgaac
cgaatcaaatccgacctgctcgttgagcaaggccgtctgcagttggaggcagacagacac
acacagaacattaaaaagagagacactcaggtgaagaatttggcatctttcctggagttg
gagggctgtgatcggacccctctcagtgagagacagctacaaagcttccacagacaagtc
aaagagagactggaccaggacacagatgccctcaaccaaaccatgcatgatatgcaagag
aaggaagcgcagaagcagcaaagcatcgatgatctccgcgataagaagaccggtcttgag
agaaccattgagcttaagagggacattcaggccaagaaacagcaggaactgaagaacata
aagtctgatctgcaaagactggagggctcgtcagacagactgcaggagttggagactgag
cttcagaaagcggagcgtgagcttgataatgccatgcaggcatgtacagtggacagtctg
aaggcagaggtgattgaactacagagggagaaaacagaactggatcaagcccagcgtaaa
ctggaccaggagatggcagtgctgaacacacacaccacagcacgcacacagatggacatg
ctcaagaaggacaagatggataaagaggagcaagtgaggaagatcaagtcgagacataat
gaagagctggtggcattgttaggacactttcctaacaagcgagagcttgaagactggatc
tacaccaaatccagagagattaattctaccagagagcgcctcagcaaactcaataaggag
cttgcatctggtgaacagaagaagagccacttcacagcagagatcaaacgtaaggaagag
cagctcgccagatatgaggagagactctttaacctgtgcggcagtcaggactttgaggat
gaactggacaaactgcaggatgaactggataagagctccaaacagaaagccatgttgacg
ggggccacagccgtgtacagtcagttcattagtcagctgacagaagagggcgagccctgc
tgtcctgtatgtcagcgtgtgttcccgtcagaagctgagctccaggacgtcattaatgat
atgcagtccaaattgaggcttgtcccagacaaactgaagaacacagagcaggaccttgag
agaaagggacgcaggcgtgatgaaatgattgcactaaaacccgtcagacagtccatcatg
gagctccaggagaaagagctgccagagctgaggaataaactccagagtgtgaatcgtgac
attgagagactgaagggagtcattgaggagcaggagacattgctgtccacactgatgtct
gaggaggacacagccaaggcctgtctgcaggacatctccctcatggaccgctatcagctt
gatctgaaggacatagaccgaaagatcgctcagcatgctgccagactgcagggagttgat
ctcagccgtaccatgcagcaggtcaaccaggagaaacaagagacccaacaccgcctggac
accacctgcagtaagatcgagctgaagaggaagctgatccaggatcagcaggagcagatc
caggccttgaggagtagtgtgaatgagatccgtggagagaagctccaaatctccagcaac
atgcagaaacgtcagcagctggaggagcagtgtgtggagttctccactgagatccagacc
ctccaccgagacatccgggaagcaaaagagcaggtgtctccactggttgctactctagag
aaactccagcaggacagacaggacctggcagagcgcaggaggcagaaacaggaggaaggg
caggaaaagataaatgccatcaaggaaaaggttaaaaacctaactctccttgaaagagag
atctcaaagtacattgaagagggcaaagacagctacaaagagcaaaaggaaactgagcta
caggaggtggaaaaacagctacatgaggctgaaaaacagcgagagaagatcaataaagac
atgggcaacatcagacaggacatagacactcagaagattcaagagcgctggctccaggat
aatctgactttaaggaagcgtgtggaggaactgaaggatgtgaccaggaaacgggaagtc
ttgctaaaggaaatgggcaacatgcaagtccaagagctgcgcaatgagcgtagagaattg
gagcgaaagttggaggacctgaaaaagaaccgcagtgtagctgttggccggcagaaaggc
tatgaagatgagatcctccgtttccgaaaggagctcagtgaggaccagtactgccgggcc
gaagatctctacagagacaagatgattgtcatgagaacaacagagctggccaataaggac
ctggatatctactataaagctttagaccaaacaattatgaagtttcatagcatgaagatg
gaggagataaataaaatcatcagagatttgtggcggagcacatacagaggacaagacata
gagtatgtggagatccgctctgatgtggatgagaacgcctctgccggtgtgaaaagaagg
acatacaactatagagtggtaatggtgaagggagacacggccttggacatgcgaggacgg
tgcagtgctggacaaaaggtgcttgcctccctcataatacgactggctttggctgaaacg
ttctgtctgaactgtggaattctggcgctggatgagcccaccaccaacctagacagagag
aacattgagtctttggcacacgccctggtggagataatcaagagtcgctctcgccagcgc
aacttccagctgcttgtaatcacccatgacgaggactttgtggagctcctgggacgatcc
aactatgtggagcatttctaccggatccggaaaaaccaggaccagtgctcagagatcata
aaatgcaacatctcctctctcaactcctacctgcactga
DBGET
integrated database retrieval system
