Myxocyprinus asiaticus (Chinese sucker): 127430542
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Entry
127430542 CDS
T08782
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C-like isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127430542
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
127430542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
Motif
Other DBs
NCBI-GeneID:
127430542
NCBI-ProteinID:
XP_051536315
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All DBs
Position
40:36524540..36556592
Genome browser
AA seq
1010 aa
AA seq
DB search
MDLSNHSGRVDFTSSNMDSRFPDQHFPHFYLDGPPENMPRHSLGGWGSYDRVFEIRVGQC
DAGQSAQREFVSQHTVKGEEWVPVKPAVTPLIPPCKDAKVLFGPPPDPMDFPEHMQYYYQ
HYCMDAFSTMGNLLCDNFTFKKKNTKCKKSILWAKKFLKTLNYKRCHVRNYWQKVRQLHY
LVSDVVSDIPPSLLAEHLHEELTSQREQLQFCSDLTGGAVGYMPLYEAQGSAESCLIYPS
GDALEKLNFHRVVPEFNDDKPPNFLMDSSPFAFELKGTIKQLSLGNMEDQGNVGVRSDYF
CGSWVLGGKIRPRLQEVIQSNDRYSCITVSPHVPDELVVATEYGAAYLWTVKKGLQKFRE
EDSNLYFNAKSPWRWCEFTCHPRVMVYADRTGAEITDARNRDCYQTLFRIGKTAACVRGE
RVLLAKYLSESHAHHHLITSQWSAYIMDERVPCVPVLKWDHMMESEPVFACSLPALSQSK
NCKVLLGSQRSQDIMLLQYTGGRMRACQARGPIQKLFSPRESLSHLNLLLPHKRHLAEER
LNVPAAGLTAVQNKDYLSVFQLTETGDLFFQTLKLHTDETTTNNNLPEPASSSVSVEHTK
EPGLSENLQSNTDNDNQGYSESEIRQRALSQLEVIDNVENGHSPASDTNEDISKEPNGTC
SKRQPIQRKDHDLQVAWNKWLKPIFTKVAGKKRHLHHHQIKTRGLIKLKMTKTDKLNKDR
PQSLRRDLQEVMKKKQLLLHGATHLPLLNVTPVPYPVDPNEWPDDLSQRLTASWDGEWKS
WWEEKLGLNREKKMEALRRKRRREKKARAWSRTSLSGSFTSSVSYQDDLSGYSSAPSQGF
DSDGESLGNSQAMEVIDGTLETEMHRKSPVIMRQFLKDQTLEQEPVESASRSPWRRSGPE
QDSSSKQPTLGSSSSLDVGLCPASATLTQRPKSQSKLHNEDYLNSLFGSQEPTQEHAEQE
GGFSFSQAQWHLAVELRGGFQPGEDYNDIIMEDQGSQHSEASAVAMVTPL
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggacttgtctaatcattcaggccgcgtcgacttcacctcgagcaacatggacagcagg
tttccagatcagcatttcccacatttttatttggacggaccgcctgaaaacatgccgagg
cacagtcttggaggctggggttcatatgatcgagtgtttgaaataagggttggtcagtgt
gatgcaggacagtctgcccagcgtgagtttgtttctcagcacactgtgaaaggagaagaa
tgggtaccagttaaaccagctgtaacccctttaattccaccatgcaaagatgccaaagtc
ttatttggtcctccaccagatccaatggattttccagagcacatgcagtattattaccag
cattactgcatggatgctttttccacaatgggaaatctactatgtgataatttcacattt
aaaaaaaaaaatacaaagtgtaagaagagtatactctgggctaagaagttcctgaaaacc
ctgaattataaaagatgccatgttagaaattactggcagaaggtccgtcagcttcattat
ctggtcagtgatgttgtgagtgacattcctccatctctcctcgccgagcacctccatgag
gaactgacgtcacagagggaacagctgcagttctgctctgatctgacagggggtgctgta
ggatacatgcctttatatgaggcacagggcagtgctgagagctgtctgatttatcccagt
ggagatgcactggagaaactcaacttccacagggtggttcctgagttcaatgatgacaag
cctcccaattttctcatggactccagcccttttgcctttgagctgaaaggaaccatcaaa
cagctcagtttgggcaacatggaggatcaaggtaatgtgggtgtgcgatcggattatttt
tgtggctcatgggtgctaggtggcaagataaggccacggctacaggaagtaatccagtcg
aacgaccgttactcctgcatcactgtcagtccacatgttccagatgagcttgttgtggcc
actgagtatggagctgcctatctctggactgtgaaaaaaggattgcagaagttcagagaa
gaggattctaatctgtatttcaatgccaagtccccatggcgatggtgtgagttcacatgc
cacccgagagtaatggtgtatgctgacagaacaggggcggagattacagacgcaaggaac
cgtgattgttatcaaacactattccggattggaaagacggcagcttgtgtgaggggagag
agagtgttactagccaagtacctgagtgaaagccacgcccatcaccacctcatcacttcc
cagtggtctgcttacatcatggacgagcgcgttccttgtgtgcccgtgctgaaatgggat
catatgatggaatcagagccagtgtttgcctgcagtctgccggcactgtcccaaagcaaa
aactgcaaagtgcttcttggttctcagaggtcacaggacatcatgttactgcagtacaca
ggtgggaggatgcgtgcctgtcaggctcgtggtcccattcagaagctctttagtcctaga
gagagtctgagtcacctaaatcttctgctaccccacaagagacaccttgctgaggagaga
ctgaacgtacctgctgcaggtctcacagctgtacagaataaggactacctatctgttttc
cagctcactgagactggagacctctttttccaaacactgaaactacacacagatgaaacc
actactaacaacaacctcccagaaccagcttcatcctctgtcagtgtagaacatacaaaa
gaacctggattgagtgagaacttgcagtccaacacagacaatgacaaccagggttactct
gagagtgagatacgccaaagagcgcttagtcaactggaagtaatagacaatgttgaaaat
ggtcactcacctgcttctgatacaaatgaagacattagcaaggaacccaatggtacctgc
tccaaaagacaacccatccaaaggaaagatcatgatcttcaggttgcttggaacaagtgg
cttaagccaatttttacaaaggttgcaggcaaaaaacgacacctccatcatcatcaaatc
aaaaccagaggtttaataaaattgaaaatgaccaagacagataaactaaataaagatcgc
ccgcagagtttaaggagagaccttcaagaggtcatgaagaaaaagcagttgctccttcac
ggggccacgcacctgcctctcctgaatgtgacccctgttccttaccctgtagatcccaat
gagtggccagatgatctgagccaacggttgacagcatcgtgggatggcgagtggaagagc
tggtgggaggagaaactgggactgaatcgggagaagaaaatggaggctcttcgtagaaag
cgtagaagagaaaaaaaagccagagcttggagtcgcacctcgctttctggaagctttacc
tcatcggttagctaccaggatgatctctctggatactcatctgcacctagtcagggtttc
gattcggatggagaatcgttggggaactcgcaagcaatggaagtgatagatggtacattg
gaaactgagatgcacagaaagagccccgttattatgagacagtttctcaaagatcagacc
cttgagcaagaaccggtcgaatctgcctcaagaagtccttggagaagatctgggcctgaa
caagactcttcatcaaaacaaccaaccctaggcagctctagttctttggacgttggtctt
tgtcctgcatcggccaccttgacacagagaccaaagagccaatcaaaactgcacaatgag
gattatcttaattctttatttggttcccaagagcctactcaagagcacgccgaacaggag
ggtggattttctttctcccaggcacaatggcaccttgctgtagaacttcgaggaggtttt
cagccaggagaggactataatgacatcataatggaagatcaaggaagccaacattctgaa
gcttccgcagttgctatggttactcccctttag
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