Myxocyprinus asiaticus (Chinese sucker): 127430633
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Entry
127430633 CDS
T08782
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127430633
03036 Chromosome and associated proteins [BR:
masi03036
]
127430633
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
127430633
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
127430633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
S1
Spt6_S1
HHH_3
HHH_9
S1_RRP5
SH2
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
127430633
NCBI-ProteinID:
XP_051536487
LinkDB
All DBs
Position
40:18241804..18275146
Genome browser
AA seq
1721 aa
AA seq
DB search
MSDFIDSEAEESEEEFEEKDLKPKKTQRFMEDDEEEEEENTEDQDEHGNLRGLIDDGDVE
EEVGHVERSGGEDSDSGEEVRHRRRKRSYDDYLDDDDLDLIEENLGVKVKRRKKKYSRVK
TMDDEGEDDDKDQIAGEIFTGDGDGEVEEGEAVDTLHPGEEEEEEEDEESDIDDFIVDDD
GQPITSKKKGKKFSGYTDAALQEAQEIFGGDFDFAEFDTEVYDHAEEEEEDQDDESWDRP
KKQTKRRTGRRSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRAIPVKPAEDDELED
EAEWIYRNAFSTPTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQHFEVPFI
AFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQRMQSYQFEQISADPDKPL
ADSTRPLDTADMERLKDVQSLDELGDVYNHFLLYYGRDIPKMQNAAKATKKKLKKIKEVS
EEDGEEAEVEEEEEEEEQKGPDLKLASRRDMYSICQSAGLDGLAKKFGLTPEQFGENLRD
SYQRHETEQFPAEPLELAKDYVCSQFNSPEAVLEGARYMVAMQIAREPLVRHVLRQTFQE
RAKINIKPTKKGKKDIDEAHYAYSFKYLKNKPVKELSGDQFLKMCLAEEEGLLSIDICID
LVGVKGYGDQTYFDEIKQFYYRDEFSHQVQEWNKQRTLAIERALQHFLYPQMAKELKNKL
IAEAKENIVKSCCKKLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAFASGRDTP
VFCSLINGEGEVVDFLRLPYFLKRRNAWREDEREKKLQDIENLKKFLLSKKPHVVAVAGE
NRDAHMVMEDIKRTISELEQDSSLPVVGVELVDNELAVLYMNSKKSEADFRDYPPLLRQA
VSVARKIQDPLVEFSQVCSSDEDILCLKLHPLQEHVVKEELLGALYCEFINRVNEVGVDV
NRAIAHPYTQSLVQYICGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCAG
FIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEIL
ENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRAPYRPPNTEEVFNLL
TKETPETFYIGKLIICVVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVW
NHFDSGSCPGQAIGVRTRLDNAVMGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKIDIE
KFNVDLTCRTSDLSDKNNEWKLPKDTYYDFDTETDDIKQDEEHKKKQQRTTYIKRVIAHP
SFHNINFKQAEKMMESMDQGDVVIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENAFS
LGHTLWINNEEFEDLDEITARFIQPMAAFARDLLGHKYFHECNGGDRKKMEELLIRSKKE
KPTFIPYYVSACRDLPGKFLLGYQPRGKPRIEYVTITPDGFRYRSQIFPSVNGLFRWFKD
HYQDPVPGITPTSSRTRTPASVNATPANINIADLTRAVNALPRNMTSQMFNAIAAVTGQG
QNPNTTPAQWASSQYGYSGGSSAGGGGSSSAYHVFATPQQPMATPLMTPSYSYTTPGQQQ
AMTTPQYPSSTPQSSHGHHQHSSSTPSSSSSRVRTPQPKTSSHTAVDWGKMAEQWLQEKE
AERRKQKTPRMTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcatcgacagtgaggctgaggagtcagaggaggagtttgaggagaaggac
ctgaagcccaagaagacacagagatttatggaagatgatgaagaggaggaagaagagaat
actgaagatcaggatgagcacggtaacctgagaggacttatcgatgatggtgatgtggaa
gaggaagtaggccatgtagagcgaagcgggggagaggacagtgactctggtgaagaggtc
cgtcatcgccgcaggaagcgaagttatgatgactatctggatgacgatgatctggacctc
atcgaggagaatctgggagtgaaagtgaaaaggaggaaaaagaaatactcacgtgttaaa
accatggatgatgagggggaagatgatgacaaagatcagattgctggtgagatcttcact
ggggatggagatggagaggtggaggaaggagaggctgtggacacgcttcacccaggggag
gaggaagaggaggaagaagatgaggaatctgatatagatgatttcattgtggatgatgat
ggacagcccataacatcaaaaaagaagggaaagaaattctctggctacactgatgctgct
ctgcaagaagctcaagagattttcgggggtgattttgactttgctgagttcgacactgag
gtgtacgatcatgcagaagaggaagaggaggatcaagatgatgagtcatgggatcggccg
aaaaagcagacaaagaggagaactggccgtcgtagcatttttgagatctatgaacccagt
gagctggagagcagccacatgactgaccaggacaatgagatccgctctacagacatgcca
gaaagattccaattgagggccatccctgtgaaacctgctgaggatgatgagctggaggat
gaagctgaatggatctacaggaatgccttttccacaccaaccatctctatgcaggagagc
acagattacctggatcgtgggacaaccaccaattttagcaggaagggccctagtaccatt
gctaagatcaaagaggccctaaactttatgaggaaccagcactttgaggtccccttcatt
gctttctacaggaaggagtacgtggaaccagagctaaacattaatgatctatggaaggtg
tggcagtgggatgagaagtggacccagctgaagaccaggaagcagaatctgacacgtctt
ttccagagaatgcagtcttatcagttcgagcagatctcagctgacccagacaagccactg
gccgattcgactcgtcccctagacactgctgatatggagagactgaaagatgtccagtct
cttgatgagctgggggatgtttacaaccacttcctgctgtactatggcagagacattcct
aaaatgcaaaacgcagccaaggccaccaagaagaaactgaaaaagatcaaggaagtgtca
gaggaagatggtgaagaggcagaagtggaggaggaagaggaagaagaggagcaaaagggg
ccagatttgaaactagcctcccgcagagatatgtacagcatctgccagagcgctggcctt
gatggtcttgcaaagaagtttggtctcaccccagagcaatttggagagaacttgcgagac
agttatcagaggcacgaaactgagcagttccctgcagagcctttggagctggccaaggac
tatgtgtgcagccaattcaacagtcctgaggctgttctggaaggcgctcgctacatggtg
gccatgcagattgcccgtgaacctctggtcaggcacgtgctcagacagaccttccaggaa
agggccaagattaacatcaagccaactaagaagggcaagaaggacattgatgaggcacac
tatgcctattctttcaagtacctgaagaacaagcctgtgaaggagctcagtggagatcag
ttcttgaagatgtgcctggctgaggaggaaggcctgctttccatagacatctgcattgat
cttgtgggagtcaaagggtatggagatcagacctactttgatgagattaaacagttctac
tacagagatgagttcagtcaccaggtgcaggaatggaacaagcagagaacgctggccatt
gaacgagccctgcagcatttcctatatcctcagatggccaaagaactcaagaacaagctc
atcgcagaagccaaggagaatatcgtgaagtcatgctgcaagaagctgtataactggctg
aaggtggcaccatatcggcctgatcagcaggtggaggaggatgatgaccttatggatgag
tcacagggaaagggtatccgtgtgctcggggtggcctttgcttctggcagagacacacca
gtgttctgctctcttattaatggtgagggagaggttgtggatttcctcagacttccttat
ttcctgaagaggagaaatgcatggagagaagatgaaagggagaaaaagcttcaagacatt
gaaaacctcaagaaattcctccttagtaagaagccacatgttgttgctgttgccggggag
aatcgggatgctcatatggtgatggaggacattaaacgcaccatcagtgagctggagcag
gactcctctcttcctgtggtgggagtagaactggttgacaatgaactggctgtgctttat
atgaacagcaagaaatctgaggcggacttcagggactacccacctctgctgcgacaggct
gtgtctgtggctcgcaagattcaggaccccctggtggagttttcccaagtgtgcagcagc
gatgaggacatcctgtgtttaaaattgcatcccctgcaggagcatgtggtgaaagaagag
ctgttgggggctctgtactgtgagttcataaaccgtgtgaatgaggttggtgtggatgtg
aaccgagccattgctcacccctacacacagagcctggtccagtacatctgtggtctggga
cctagaaaaggctcgcacctgctcaagattctcaaacagaacaacactaggctagagaac
cggacccagttggtcaccatgtgccatatgggacccaaagtctttatcaactgtgctggc
ttcatcaagattgacactgcctctcttggagacagcactgactcctatatcgaggtcttg
gatggttcccgagtgcaccctgaaacatatgagtgggcacgtaaaatggcagtggatgct
ctggagtacgacgagtcggcagaagatgctaacccagctggagcgctagaggagatccta
gagaacccggagaggctgaaagacctggatctggatgcctttgccgaggagctggagaga
cagggttatggtaataaggggatcacactttatgacatccgtgcagagcttagctgtaga
tataaagatttgagagccccgtacaggcctcctaacactgaagaggtcttcaacctgctc
accaaggagacacctgagaccttctatattggtaaactgatcatctgtgtggtgactggc
attgctcacagacggccacagggtgagagttacgaccaggccatccgtaatgatgaaacc
ggactctggcaatgtcctttttgccagcaggacaacttccctgagctcagtgaggtgtgg
aatcactttgacagtggctcctgccctggtcaagccatcggtgtgagaaccagattagat
aatgccgtcatgggcttcattccaaccaagtttctcagtgacaaggtagtcaagcacccc
gaggagagggtcaaggttggcatgaccgtgcactgccgcatcatgaagatcgacattgag
aagttcaatgtggacctcacctgcaggacatccgatctgagcgacaagaacaatgagtgg
aagcttcccaaagacacctactatgactttgacactgagacagatgacattaaacaggat
gaggagcataagaagaaacaacagagaaccacttacattaagcgtgtgatcgctcacccg
tccttccataacatcaacttcaaacaagcggagaaaatgatggaatctatggaccagggt
gatgtggttattcgacccagcagtaaaggggagaaccacctgacggttacatggaaggtg
gctgatgggatctatcagcatgtggatgtgcgtgaggagggcaaagagaatgccttcagc
cttggacatactctctggatcaacaatgaggagtttgaggatctggatgaaatcacagcc
agatttattcagcccatggctgcgtttgcacgagatctgcttggtcacaagtacttccat
gagtgcaatggcggtgataggaagaaaatggaggagctcctcataaggagcaagaaggaa
aagccgacattcatcccctactatgtttcggcttgtagagacctgccaggaaaatttctg
ctgggttaccagcctagagggaagccaaggatagaatatgtaaccatcactcctgatggc
tttaggtatcgttctcagatattcccttcagtcaatggtctcttccgctggttcaaggac
cactatcaggatcctgtgccaggcatcacgccaaccagcagcagaacgcgaacacccgct
tcagtgaacgccacacctgccaacatcaacattgcggatctgactcgtgcagtcaacgct
ctcccacgaaacatgacgtcacagatgttcaacgctattgcagcagtgacggggcagggt
cagaaccctaatacaacaccagcccagtgggcctccagtcagtatggctacagtggaggc
agcagcgcaggaggaggcggcagcagcagtgcttatcatgtgtttgcaacgccccagcag
cctatggcgacacccttgatgacacccagctactcttacaccacgcctggccagcagcag
gccatgaccacgccccagtatcccagcagcaccccgcagtcctcgcacggacaccatcag
cattcttcctccactccgtcatcctcttcatccagggtccggacgccacagcccaagaca
agttcccacactgccgtggattggggtaagatggccgaacagtggctacaggagaaagaa
gcggaacggcggaagcaaaagacgccccgcatgacgccccgaccttcgcccagccccatg
atcgagagcacacccatgtctattgctggagatgccacccctctcttggacgagatggac
cgatag
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integrated database retrieval system
