KEGG   Myxocyprinus asiaticus (Chinese sucker): 127430854
Entry
127430854         CDS       T08782                                 
Name
(RefSeq) vimentin-like isoform X1
  KO
K07606  vimentin
Organism
masi  Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:masi00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127430854
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:masi03019]
    127430854
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:masi04812]
    127430854
   04147 Exosome [BR:masi04147]
    127430854
Messenger RNA biogenesis [BR:masi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     127430854
Cytoskeleton proteins [BR:masi04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     127430854
Exosome [BR:masi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127430854
  Exosomal proteins of other cancer cells
   127430854
SSDB
Motif
Pfam: Filament DUF3450 DivIC DUF7310 CENP-F_leu_zip DUF1664 FPP Crescentin Tropomyosin SidF Phage_GP20 Prefoldin Cep57_CLD_2 PUMA_CC CCDC113_CCDC96_CC DUF7491 DUF4407 FlgK_D1 BLOC1_2 DUF724 Prominin Laminin_II Sec10_N Vps52_CC ADIP ATG14 TPR_MLP1_2 bZIP_2 DUF4349 ZapB Fzo_mitofusin DUF2730
Other DBs
NCBI-GeneID: 127430854
NCBI-ProteinID: XP_051536938
LinkDB
Position
40:40640295..40645596
AA seq 417 aa
MRGSSYSQKSLTVSGSSRMRVQSPSPSRCRGSSYSRGRAGFQGQAMEVGTEIHQHHANEK
EEMQELNVRFAGYIEKVQALEQRNAALKAELESLQGRFKGGPAGLGEEYKLKFKEMRDLI
EALTAEKGAADIERGYIEEEVEVWRLKVEEELALKEEAEIILREFRQDVDNATLEKADLE
KRIEQLVAEIEFLKKLHDEEVADLLRQIEESKVTVELDSDRPDLAAYLRNMRVEIEAVAA
RNVQEAEKWYKGKFDTLKEQASKHEDQMKTMKEEITTFHNQISDLQNQIDSLRARNGAME
QQLEDMEVAHLEKVAGLEGIIAQLESQLCETKVEMGKYLADYQELLHIKLRLDAEIATYR
KLLEGEEKRLGISVTEGVAGSFMFAVSRINGQFRWDQNINGITFCALFRWSSFLQIP
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgagaggttcatcgtattcccagaagtccctgactgtcagcggctccagcaggatgagg
gttcagagcccgtcgccctcccgctgccgaggatcttcgtacagtcgtggtcgggctgga
ttccagggtcaggccatggaagtcggcaccgagatccatcagcaccatgccaatgagaaa
gaggagatgcaggagctgaacgtgcgttttgccggctacatcgagaaggtccaggcgctg
gaacagaggaacgccgcactgaaagccgagctagaatccctgcagggacgctttaaagga
ggtcccgccggactcggggaagaatacaaactgaagtttaaagagatgagggacctgatc
gaagctctgaccgctgagaagggtgcggctgatattgagagaggctacatcgaggaggaa
gtggaggtctggagactgaaggtggaggaagagctggctctcaaagaggaggcagaaata
atcctccgtgagttccgtcaagacgtcgacaacgcaacactcgagaaggccgacctggag
aaacgcatcgagcagctcgtggccgagatcgagttcctgaaaaagctccatgatgaagaa
gttgccgacctgctcagacaaatcgaggagtccaaggtaacggtggagctcgactccgac
agacccgacctggccgcgtacctgcgtaacatgcgggtggagatcgaggcggtggccgcc
cgcaacgtccaagaggcagaaaagtggtacaagggcaagtttgacaccctgaaagagcaa
gccagcaaacacgaggaccagatgaagaccatgaaagaggagatcaccaccttccacaac
cagatatcagacctgcagaaccagatcgacagtctgagagcacggaacggcgctatggaa
cagcagcttgaggacatggaagtggcacacctggagaaggtggcagggctggagggcatc
atcgctcagctcgagagccaactgtgtgagaccaaagtagaaatgggaaaatacttggcc
gactaccaagagctgctacacatcaagctgagactggatgctgagatcgccacctacagg
aagctgctggaaggagaggagaagcggctcggcatctctgttacagagggtgtggcaggt
agtttcatgtttgctgtttctagaataaatgggcagtttcgatgggatcagaacataaac
gggatcactttttgtgctctgtttagatggtctagttttttgcagatcccctaa

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