Myxocyprinus asiaticus (Chinese sucker): 127431658
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Entry
127431658 CDS
T08782
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit pan3-like isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127431658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127431658
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127431658
mRNA degradation factors
3'-5' decay
Pan complex
127431658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf-CCCH_4
zf_CCCH_4
Torus
Pkinase
Motif
Other DBs
NCBI-GeneID:
127431658
NCBI-ProteinID:
XP_051538147
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Position
41:complement(15839552..15863035)
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AA seq
858 aa
AA seq
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MLANKRVDFAEETDFIAQRTVRCSLILKCFKNILLLSSRLENLYVRASSGGSSSSSGAMN
SGLPASAVPLGGVGIPGVKVKFCRYYAKDKTCFYGDECQFLHEDPSMASLSLHGGGAGAG
GGGSPVSLSLVGGAVTAAGYALGGNAASGSPANVPKKSDSLGPAGTALDGQLLSITGMEG
GALNDASLTNSYFSSTFIGVNGFGGPAESKYSMMQRMTSSSSSPSLLNDGAKSYSHSAHD
PINSPTSSLFSDFGALSLSQRRKAPNPTASEFVPKGAPRIASMSQTTVPAFASPIFSHPG
LSSSTAAALAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPIPANYMVPTTTSDQGG
GAHIIQKETVGGTTYFYTDNTPAPLAGMVFPTYHMYPQTAPHVAYMQPKANAPSFFMADE
LRQELINRHLITMAQIDQSENPGVPSEVDSYHSLFPLEPLPPPNCLQKTSNFSYITSCYK
AVNSKDDLPYCLRRIHGFRLVNTKCMMLVDMWKKIQHSNTVTLREVFTTKAFGDHSLVFS
YDFHAGAETMFSRHFNDPAADSFFTKRKWGQHELPPPRQHAGLLPESLIWAYIVQLSSAL
RTIHTAGLACRVMDPSKILITGKTRLRVNCVGMFDVLTFDNSQTNHLALMPQYQQADLIS
LGKVVLALACNSLAGIQRENLQKAMELVSINYSSDLKNLILYLLSEQSRLRSVNDIMPMI
GARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRY
LLKLFRDHLFHQVTEASTPWIDLSHIVSCLNKLDAGVPEKISLVSRDEKSVLVVTYSDLK
RCFESTFQELLVTANGPL
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccaacaaacgcgtggattttgctgaagagactgattttattgcacaacgtaca
gtaaggtgctcattgattctcaagtgttttaaaaatatactactgctgagttctcgactc
gagaatctctatgtgcgagcgtcttccggcgggagcagcagtagcagcggtgccatgaac
agtggactcccagcttcagctgttccgctcgggggtgtcggtatacccggtgtgaaggtg
aaattctgccgctactatgcgaaagacaagacttgtttttacggagatgaatgccagttt
ttgcacgaggacccgtccatggcgagcctttctctgcacggtggtggagctggtgctgga
ggaggaggaagccccgtctctttatctctggttggaggagcagtgacggcggcgggttac
gcactcggaggcaacgcggccagcggctcaccggcgaacgttcccaaaaagagcgattct
ctcggtcccgcgggaacggctttagatggtcagctgttgtccatcactggaatggaggga
ggtgctctgaatgatgccagtctgaccaactcgtatttcagcagcacctttattggggtc
aatgggtttggaggccctgcagagtccaagtattcaatgatgcagaggatgacgagcagc
agcagctctccaagtctgcttaacgatggtgccaagagctacagccacagtgctcatgat
ccaatcaattccccgacatcatctctcttcagtgattttggtgctttgagcctatcacaa
aggagaaaggctcctaaccccacagccagtgagtttgtccctaaaggggccccacgaata
gcctccatgtctcagacgactgtgccagcgttcgcctcccccatcttctctcatcctggc
ctgagcagctccactgcggctgctcttgcacctggtatgtccctttcggctgggtcatct
cctctccattcccccaagatcacgcctcacacttccccagccccacgacgacgcagccac
acacccaaccctataccagccaattacatggtgcctaccactacgtctgaccaggggggt
ggagcacacataattcagaaggagactgtgggcgggaccacctacttctatactgataac
acccctgctcccttggccggaatggtgttcccgacgtatcacatgtatccacaaacggca
cctcatgtggcgtacatgcagccgaaagccaatgcgccatctttctttatggctgatgaa
ctccgacaggagctgattaacaggcatttgataacaatggcacagatagatcagtcagag
aaccctggagtgccatctgaggtagacagttaccacagcctctttcccctggaacccctt
cccccacccaactgccttcagaaaaccagcaacttcagctacatcacttcctgttacaag
gcagtcaacagcaaagatgacctgccttactgcctcaggaggatacatggattcaggttg
gtaaacaccaagtgcatgatgctggtagacatgtggaagaaaattcagcactccaatact
gtgacccttcgagaggtcttcaccaccaaagcttttggagaccactcactggtattctcc
tatgacttccacgcgggggctgaaacaatgttcagcaggcacttcaacgatccggcagcg
gattctttcttcactaaaagaaagtggggccagcatgagctccctcctccacggcaacac
gcgggcctcttaccagagtctctgatctgggcctacatcgtccagctgagctcagcactg
cgcaccattcacacagctgggctggcctgcagggtcatggaccccagcaagatcctcatc
actggaaagacacggttacgagtcaactgtgtaggaatgtttgatgtcttaacatttgac
aatagtcagaccaaccacctggcacttatgccccagtaccagcaagcagatctcatctcc
ctggggaaggtggtgttggcactggcgtgtaactctttagctggcattcagagagagaat
ctgcagaaggccatggagcttgtgtccatcaactactcctctgacctcaaaaacctcata
ctgtacctactgtcagaacagagccgtctacgcagcgtcaatgacattatgcccatgatt
ggagcgcgattttacactcaacttgatgcctcgcaaatgaggaatgatgtcattgaggag
gacttggccaaggaggttcaaaatgggcgattgtttcgcctactggcaaaactgggaact
atcaatgagagaccagaatttcagaaggacccaacatggtctgagactggtgatcgttat
ctgctgaagctcttcagagatcacctgttccaccaggtaactgaggcaagcacaccctgg
atcgacctcagccatattgtatcctgtctcaataagctggatgctggagtaccagagaag
atcagcctggtatcgcgggatgagaagagcgttcttgtggtgacgtactcagacctaaag
cgatgctttgagagcaccttccaggaacttctggtcaccgctaatggcccgctgtag
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