Myxocyprinus asiaticus (Chinese sucker): 127432323
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Entry
127432323 CDS
T08782
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127432323
03036 Chromosome and associated proteins [BR:
masi03036
]
127432323
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
127432323
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
127432323
SLIK complex
127432323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
127432323
NCBI-ProteinID:
XP_051539180
LinkDB
All DBs
Position
42:34102712..34215662
Genome browser
AA seq
1781 aa
AA seq
DB search
MDGRSEDESVTNSTGESSNSDDESGSGSGSGSSSSSSSSSSSQSESSDSGSGSDSGSQSD
SDSEKSKEKNDQDNKIDGAAFWKSNPSILTVQRSAMLRKQLQQEQLQQQQSSSNSGSDED
SSSSDDSDDDSKSKSKESGSDSDSGSDSRSGSGSGSSGSSAEEGNSDESVSDYEPSQKVK
SRKPPNKASTRNGKKSKASKKKPSLSSDEEDDYKKALAGPRRQATVNVSYKEDEELKTDS
DDLVEVCGEDVPPPEEDEFDTLERVMEMRMGWKGATGAVTTVYAVEADGDPNANFDPNRQ
PGEVQYLIKWKNWSHIHNTWETEETLKQQNVKGMKKLDNFKKKEQEKKKWLKTASPEDVE
YLNCQQELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYFECSWEDGALIARK
FQKCIDEYMSRNQCKTTPSRDCKVLKQRPRFVPMKKQPHYIGADGLELRDYQLDSLNWMA
HSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQLWA
PQMNVVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGNVSWAFIGV
DEAHRLKNDDSLLYKTMMEFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFHSWELFEE
DHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQYYKWILTRN
YKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPEDNEFYNKQEGLQHLIRSSGKLILL
DKLLVRLKERGHRVLIFSQMVRMLDILAEYLKYRQFLFQRLDGSIKGEMRKQALDHFNAD
GSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLV
TKGSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSTPFNKEELSAILKFGA
EELFKEQEGEEQEPQEMDIDEILKRAETRENDPGPSNVGEELLSQFKVANFSMMDDEEIE
MDTDRNDKNWDDIIPEEQRRRLEEEERQKELAEIYLLPRMRKCAKQINFNGNEGRRSRNR
RYSGSDSDSVSDRKRPKKRGRPRTIPRENIKGFTDAEIRRFIKSYKKFGGPLERLDAIAR
DAELVDKSEHDLRRLAETVHNGCLKTLRENPCGPEKTSGGRRGKVKGPTFRISGVQVNAK
LVISHEEELAPLHKAIPADPEERKRYIIPCHSKAAHFDIEWGKEDDSSLLIGIYEYGYGS
WEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQKQAGMANSR
KRKPRGKKNKAVKPKVDEVTNSLSSVPPSDKSSEDEDEKEEEEKETPPVKPPNRKGRATE
RVVKEEEESEEEPPQVNELEEKEIKEKVVKKEIKKEKKEESRDSKEKEPKEKKEIKLEPV
HREEESPAEKAPEVKTEVWEKKADTPMHTQAGGESIPASEESEELDQKTFSVCKERMRPV
KAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLQEYTNPEQIKQWRKNLWIFVSK
FTEFDARKLHKLYKHAIKKRQEIAQAVEQNTCTVNTQSLKHTDIERMKESQQDDSSRDSY
SSDRHHPSSRYQEHSKDRHPGDSYRKSSDSRKRPYSSFSNGKEHRERERDHYRERGERQD
SRYFSDSKHRKLDHRSDSNSKDRMHSEHRSHSEHRLGSDYTHHKSSRDYRYHSDWQMEHR
VSGSGTRSPRDQRSPLGHRSPFEYSSDHKSTPEQVWSSRKT
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atggatggacgcagtgaggatgaaagtgtcaccaacagtaccggagagtccagtaactca
gatgatgagtctgggtcaggatcgggctctggctccagctcaagcagtagcagctccagc
agtagccagtcagagagcagtgactcaggaagtggctcagattccggaagccaatcagac
tctgactctgagaaatccaaggaaaaaaatgatcaggacaacaaaattgatggagcagcg
ttttggaagtccaaccccagtatcttgacagtgcaaaggtcagccatgctcaggaaacag
ctacaacaagagcaactccagcagcagcagagctcctcaaacagcggctcagatgaggac
tcttccagtagtgatgactcagatgatgactcaaaaagcaagagtaaagagtctggatca
gactctgattcgggttcggactctcgctctggttcgggaagtggctcgtcgggctcctca
gcagaggaggggaacagtgatgagtctgtgtcagactatgagcccagtcaaaaagtcaaa
agcagaaaacctccaaacaaggccagtactaggaatgggaagaagagcaaagcttcaaag
aagaagccctccctctcctcagatgaagaggatgattataagaaggccctagcaggacct
cggcggcaggccaccgtcaacgtgagctacaaagaagacgaggagctgaaaactgattct
gatgacttggtggaggtgtgtggagaggatgtgccgccaccagaggaagacgagtttgat
acactggagagagtgatggaaatgaggatgggatggaaaggagcaacgggggctgtgacc
acagtttatgccgtagaggcagacggagaccccaatgccaactttgacccaaacaggcag
ccaggagaggtgcaatacttgatcaaatggaagaattggtctcacattcacaacacctgg
gaaacagaggagactctcaaacaacaaaatgtgaagggcatgaagaaactggacaacttc
aagaagaaagagcaggagaagaagaaatggctcaaaactgcttcacctgaggatgtggaa
tacttaaactgtcagcaggaactcatggatgacctgcattcacagtatcaacttgtggaa
agaatcattggacattcaaatcagaagtcagctgcaggttatccagactacctgtgtaaa
tggcaggggctgccatactttgaatgcagctgggaagacggagctcttattgccagaaag
tttcagaagtgcattgatgaatacatgagccgaaatcagtgcaaaaccaccccctccaga
gattgcaaggttttaaaacagagaccacggtttgtgccaatgaagaaacagcctcactat
attggtgcagacggcctagaactgcgggactatcagttggacagtctgaactggatggcc
cattcttggtgcaaagggaacagttgtatcctagcagatgagatgggtctgggaaaaacc
atacagaccatcagcttcctcaattacctgttccatgaacaccaactgtatgggcccttc
ctgctggtggtgcctctgtccaccctcacatcttggcagagagaaatccaattgtgggct
cctcagatgaatgttgttgtctacctgggtgacatcaacagcagaaacatgatccggaca
catgaatggatgcatccgcaaaccaagcggctgaaattcaacatcctgcttactacatat
gaaattctcctgaaggataagtcatttttaggaaacgtaagctgggcattcattggtgtg
gatgaggcccatcggctcaagaatgatgactcactcctctataagaccatgatggagttc
aagtccaaccacaggctcctgatcactggcacacccctgcagaactccctcaaagagctc
tggtctttactgcatttcataatgcctgagaagtttcactcgtgggagctgtttgaagag
gatcatggaaaaggtagagactctggttacaccagccttcataaagagctggagcccttc
ttactgcgcagggtaaagaaggatgtggagaaatctctgcccgccaaggtggagcaaatc
ctcagggtggagatgagtgccattcagaagcaatactacaagtggatattgacaaggaac
tataaagcccttagtaaaggcactaaaggaagcacgtcgggcttcctcaacatcatgatg
gagctgaagaaatgctgtaatcactgctacctcattaaaccacccgaggacaacgagttc
tataacaaacaagaaggcctacagcatctgattcgcagcagtggaaagctgattcttctt
gacaaactgcttgtacggctgaaggaacgaggccaccgcgtgctcatattctcccagatg
gtccggatgctggacatcctggccgagtacctgaagtaccgtcagttcttattccagaga
ctggacggttccataaagggtgagatgaggaagcaagcgttagatcatttcaatgcagat
ggctcagaggacttctgcttcctgttgtccactcgagcaggtggtcttggcattaatttg
gcctctgcggatacagtggttatttttgactcggactggaaccctcagaatgacctgcag
gcgcaggccagagctcataggattggacagaaaaaacaggtgaatatataccgtctggtg
acaaagggctcagtagaggaggaaattattgaaagagccaaaaagaagatggtgttggac
cacctcgtgattcagaggatggacaccactgggaagacggtccttcatacgggtgctgcg
ccttccagttccactccgttcaacaaggaggagctgtcggccattctgaagtttggtgct
gaagaactctttaaagagcaggaaggagaagagcaggaacctcaggagatggatatagat
gaaatcctgaagagagcagagaccagggagaatgaccctggaccatcgaatgtgggagag
gagctcctctcacagttcaaggtggcgaacttctccatgatggatgacgaggagattgaa
atggacacggataggaatgataagaactgggatgatattattccagaggagcagcgaagg
agactcgaggaggaggaacgacagaaggagcttgcagagatttatttactgccccgcatg
aggaaatgtgctaaacagatcaactttaatggtaacgaaggcagacgcagccggaacagg
cgatactctggttcagacagcgattctgtctcagacagaaaacggcccaagaaacgggga
agacctcgaaccattccaagagagaacattaagggcttcaccgatgctgagatacgcaga
tttatcaagagttacaaaaaatttggtggcccattagaaaggcttgatgctatagcacga
gatgctgagcttgtggataaatcagaacatgatctgcgtcggctggctgagaccgtacac
aatggctgtctgaaaaccctgagggagaacccctgtggaccggagaaaacctcaggtggc
agacgaggaaaggtgaaaggacccaccttcaggatctcaggggtccaggttaacgctaaa
ctggtgatttctcatgaggaggagctggcaccattacacaaagctattcctgccgaccct
gaggagaggaagaggtatataatcccatgccactcaaaggcagctcattttgacattgag
tggggtaaagaggatgattccagcctgctcatcgggatctatgagtacggatacggcagc
tgggaaatgatcaagatggacccagacctcaacctcacacataagcttctaccagatgat
cctgacaagaagccacaggccaaacagcttcagacaagagccgactacctcatcaaatta
ctgagtaaagacctggccaagaaggaagcacagaaacaagctggcatggcaaattcacgg
aagaggaaaccacgaggcaagaagaataaagctgtgaaaccaaaggtggatgaggttacg
aacagtctgtcttcagtgcctccctcagataagagctctgaagatgaggatgagaaagag
gaagaagaaaaggaaacacctcctgtgaagccacccaatagaaagggacgggccacagag
cgggtggtaaaggaggaagaggagtctgaggaggagccacctcaggttaatgagttggaa
gagaaggaaataaaggaaaaggtggtgaaaaaagaaatcaagaaggagaaaaaagaggag
agccgtgacagcaaagagaaagaaccaaaagagaaaaaggaaatcaagctggagcctgtg
cacagagaggaagagtcccctgcagagaaggctccagaggtgaaaacagaagtgtgggaa
aagaaagctgatactcccatgcacacacaggcaggaggagagagtattccagcttctgag
gagtctgaagagctggaccagaagacttttagtgtgtgcaaggagcgcatgaggccagtg
aaggcggcgctgaagcagttggatcgtccagagaagggtctgtctgagcgagagcagctg
gaacacacacgccaatgcctgatcaaaataggagaccacatcacagagtgtctgcaggaa
tacaccaaccctgagcagatcaaacagtggaggaaaaatctttggatatttgtttccaaa
ttcactgaatttgatgcaagaaaactgcataaactgtataagcatgcaatcaagaaaaga
caagaaattgctcaggcagtggagcagaacacttgcactgtaaatacacaaagcttaaaa
cacacagatattgaacggatgaaggagtcacagcaggacgacagcagcagagacagctac
agctcagacagacaccacccatcatctcgctaccaagaacacagcaaagatcgccacccc
ggtgattcatacaggaagagctccgactccaggaagagaccctactcctccttcagcaat
ggcaaagaacacagagagcgagagagagatcactacagagagagaggagagcgacaggac
agcagatacttcagtgacagcaagcacaggaagctcgaccaccgatcagacagcaactcc
aaggacaggatgcactctgaacaccgctcccactctgagcaccgcctcggctctgactac
acgcaccacaaatcctccagggactaccgttaccattcagactggcagatggagcaccgg
gtgtcagggagcggcacccgctctccccgagaccagcgctcgccactcggacaccggtca
cccttcgagtactcctctgaccacaaaagcacacccgaacaggtctggagcagccgcaag
acataa
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integrated database retrieval system
