Myxocyprinus asiaticus (Chinese sucker): 127432495
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Entry
127432495 CDS
T08782
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1-like isoform X1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
masi04990
]
127432495
Domain-containing proteins not elsewhere classified [BR:
masi04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
127432495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THSD1_D3
THSD1_N
TSP_1
THSD1_D2
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
127432495
NCBI-ProteinID:
XP_051539587
LinkDB
All DBs
Position
42:complement(17408532..17424264)
Genome browser
AA seq
945 aa
AA seq
DB search
MKVSDYHFQVHCGELDSVGEENVGRGKGGSLTFPALSSPGCICFFCRKRHIQISVCRSQC
LPSYCTIVQLQTTAQYSSRFFLKLEYSMAGIHLWPSMHIALSNASVFVDYSTVSNLTDHR
LTVSLIDIDRNITVLTRPLPFNQSEGSLEFNCSCFLYAGNFRYKLEQIHKVDVSNQTAIW
WYSPVLHVHWPNFHLAVDRGSNDQSSNDLRIGVYTSDHFHPCPSSKASSLYLDVSYLEQM
HIGRNTIDKLQSRKRHIVKVVRSQHVELTCASPLTEHGFIQISIKSPHIQQDIKSSGPLY
LSSIFPYKLLVDNIYKSGCEGAVSVHRIAPPCTVTNGKVLLYKEESKEKAAPSHLAFNFL
TQGENETEFNCSIFDPGRNKYCFHFTLVYSQASLTHTCVIVQRNSRMWGPWQPWSGCSVT
CGEGVRERERECLLPSGGGIQCTGMVREQSHCSLEDCTGELPPLSVTPPPAVSSPLAGNL
VVVAGISLCLAVILATILITVWRKLCHAPNCSPMRHSSVHSPSGRKNSDEASICGHSTQR
PSFSESLQAAPLQKGLTVPAKQEPSDRGVLARQQSMSLLLPLPQDPERMSPSGQKIVPPI
FGYRLAQQQLKEMKKKGLKEATQVYHVSQSPVDDTLLEATASNPAGLTPVPQEVDSPEEA
NSSQFRTKSPFLEPTWPPKILDTLSDRHKVDMLLGPQKSVFSANAPHLERTADWVEMIER
NRGTYSKNPNFRRTSSFHENNQQQLPALRLFRERSMTRVTPRQLPEGSCRNRTWEQTLPK
LEVWSCFEPRITDSSGDHRRRPWVDTPPSQSNSKDNTLAVLNSASVTPTKDPLVDRQRLA
RSPSSAMDRAERAEQNWSRRGPSPIQRNILARKLREANSSTCQRQRSSTFSTSEQYRGRC
RSLPLSADYSSYPCSLTESEQHMMDISGYLGEEDGVEVLNIHRLT
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcagtgattatcattttcaagtgcactgcggtgaattggactcagttggagag
gaaaatgtagggagggggaagggagggtcgctgacttttcctgcactctcttctcctgga
tgcatttgttttttctgcaggaagagacacatacagataagcgtttgcagatcacaatgc
ctcccaagttattgtactattgtacagttacagacaacagcacagtacagcagtagattc
tttcttaaacttgagtactctatggctggtatccatctgtggccttcaatgcacattgcc
ttgagcaatgctagtgtatttgtggattacagcactgtcagcaacctcactgaccacaga
ctgactgtatcattgattgacattgacaggaacattacagtacttaccaggccacttccc
tttaaccaatcagaagggtcactggagttcaactgctcctgcttcctgtatgcaggtaac
ttcagatacaaactggagcagatacacaaggttgacgtgtctaaccagactgccatctgg
tggtatagcccggttttgcatgtgcactggcccaactttcacttggctgtggatcgtggc
agcaacgaccagagctctaatgacttaaggattggtgtgtacactagtgatcacttccat
ccttgtcctagtagcaaagcttcatctctataccttgatgtcagctacctggaacaaatg
catattgggaggaacaccattgacaagttgcagagccggaaaagacacattgttaaagta
gttaggtcacagcatgtggagttgacttgtgcgtcccctctaacagagcatggattcatc
cagatttctataaaatcgccccacatccagcaagacatcaaatcttctggtcctctctac
ctgtccagcatctttccctacaaacttcttgtagataacatctacaaaagtggctgtgag
ggagccgtgtcagtccatcgaatcgctcctccctgtacagttacaaatggaaaagttctg
ctttataaggaggagagtaaggagaaggctgctccctctcatctggcctttaacttcctc
actcaaggggagaatgagactgagtttaattgctccatctttgaccctggcaggaataag
tactgctttcatttcacactcgtctacagtcaggccagtttaacacacacctgtgttatt
gtgcaaaggaattcaagaatgtggggtccatggcagccatggagtggttgcagtgtgaca
tgtggtgaaggggttagagagcgtgaacgtgagtgtctactgccctctggtggtgggatt
cagtgcactggcatggttagggagcaatcccactgttcgctggaagactgcactggggag
ctcccccccctatcggtcacccctcccccagctgtaagctctcccctagctgggaatcta
gtagtagtggcagggatctccctgtgcctggctgtgatcctggccaccatcttaataact
gtgtggagaaaactctgccatgctccgaactgcagccccatgcgacatagctcagttcac
tctcccagtggccggaaaaactctgatgaggcttctatttgtggtcacagcacacagaga
cccagtttctccgagagtttgcaagcagctcccctacaaaaagggctcaccgtgcctgcc
aagcaagagccgtctgacagaggtgtgcttgctcgacagcagagcatgtctctccttctc
ccccttcctcaagacccggagagaatgtctccttctgggcaaaagatcgttccgcctatt
tttggctatcgcttggctcaacagcagctcaaggagatgaagaagaaggggttgaaagaa
gccactcaagtctatcatgtgtcccagagtccagttgatgacaccttgctggaagccaca
gcttcaaaccctgcaggtctaactccagtgcctcaggaagttgacagcccagaagaagct
aacagcagccaatttcgcacgaagtctcctttcctcgaacctacgtggcctccaaaaatc
ttggacactttatcagataggcacaaggtggacatgttgctgggtccccaaaagtctgtg
ttcagtgccaatgccccccatcttgagcgcacagcagattgggtggagatgatagagcgc
aatagagggacctactcgaagaatccaaatttcaggaggacatcaagcttccatgagaac
aaccagcaacagttgcctgcattgcgactcttccgagagaggagcatgactagagtgact
cctcggcagcttcctgaggggagctgtagaaaccgaacctgggagcagacacttcccaaa
cttgaggtctggtcctgcttcgaacctagaataactgatagctcaggtgaccataggagg
aggccatgggtggacactcccccatctcagtcaaactcaaaagataatactttagcagtt
cttaattcagcttcagtgacacccactaaagatcccctagtggatcgtcaaaggttggct
cggagcccttcttccgcaatggacagagcagaaagggctgaacagaactggagcagaaga
ggcccctctcctatccagaggaacatacttgccagaaagctacgagaggctaactcatct
acctgccaaaggcaacgcagttccacattctctacctcagaacagtacagggggcgctgt
cgcagccttcctctctccgcagactacagcagctacccctgtagtctcactgagtcagag
cagcacatgatggacatttctggatacttgggcgaggaagatggagtagaggttctaaat
attcacagactcacctga
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