Myxocyprinus asiaticus (Chinese sucker): 127433174
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Entry
127433174 CDS
T08782
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
masi03009
]
127433174
Enzymes [BR:
masi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127433174
Ribosome biogenesis [BR:
masi03009
]
Eukaryotic type
Pre-60S particles
Helicases
127433174
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
SBF_like
Helicase_C_2
Cas3-like_C_2
YbjM
Motif
Other DBs
NCBI-GeneID:
127433174
NCBI-ProteinID:
XP_051540842
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All DBs
Position
43:34566941..34574328
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AA seq
602 aa
AA seq
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MENITDGKWDSLPVKLNDNISQTLKELKFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKT
LAFVIPVLEILLKREEKLKKMQVGALIITPTRELALQISEVMGCFLQGFPQFRQILLIGG
SNPIEDVEKFKDQGANIVIATPGRLEDMFRRKADGLDLPTAVKSLDVLVLDEADRLLDMG
FEASLNTILGYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAATSVQKTPA
RLSNYYTICRVEDKFNTLVAFLRQHKHEKQLVFFSTCACVEYFGKALEVLIKNVTVHCLH
GKMKDKRNKIFADFRALKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVHRCGRTA
RIGNHGSALVFLLPMEESYVNFLSINQKCPLQLFRPVKDVVDVLPKLKTMALRDRAVFEK
GMKAFVSCVQAYAKHECSLIFRIKDLDLAALARGFALLRLPKMPELRGKTFPDFKEEIAD
TDAIRFKDKNREKQRQKMLAQQREKYKDMPPRKNYVKNKAWSKQKTRKDRKKKVAAKRKL
NEGSDGDDEDLNELLNDTRVLKKLKKGKISEEDFEKHISSAGSSKHKQATTSHEDSSDGD
GE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacatcaccgatggaaaatgggacagtcttcctgtgaaacttaatgacaacata
tcacagactcttaaagagctgaaatttacatacatgacaccggttcagtctgcctgcatc
cctctttttatgagtaataaagacgtagctgcggaggcggtgactggcagtggaaaaact
ctcgcctttgtgattcctgtcttagaaattctcctaaagcgagaagaaaagttgaaaaag
atgcaggttggcgcattgatcataactcccacccgtgagctggcgctgcagatcagtgaa
gttatgggctgttttctacagggatttcctcagttcaggcagattctgttaattggaggc
agcaaccccattgaagatgttgagaagtttaaggatcagggagccaatattgtgattgcg
acgcccggtcgattggaggatatgttcaggaggaaggcagatggtcttgatctgcccacc
gctgtgaagtctctggatgttctagtcttggatgaagcagaccgattgctggatatgggc
tttgaggcgagtttaaacactattctggggtatttaccgaagcagcgacgcacaggactt
ttctctgccacacaaacacaagagctggagaagctggtgagagcgggtctgaggaaccct
gttcgtatcacagtgaaggagaaaggtgtggcggccacaagcgtacagaaaacccctgcg
agactcagtaactactacacaatttgtcgagtcgaggataagttcaacactttggtggcg
tttctcagacaacacaaacatgagaagcagctggtgttcttcagcacctgtgcgtgtgtg
gagtatttcggtaaagccctggaggtgttaatcaagaacgtcaccgtccactgcctccat
ggcaagatgaaagacaaacgaaacaagatcttcgcagatttccgagctctgaagagtggg
attcttgtgtgcacagacgtcatggcaagaggtattgacataccggaagtgaactgggtt
cttcagtacgacccaccaagcagtgcaagttcctttgtacatcggtgtgggcgaactgca
cgcatcgggaaccacggcagtgcactagtctttctgctaccaatggaagagtcgtatgta
aatttcctttccattaatcaaaagtgtcccctacagttgtttcgtccagtgaaagatgtg
gttgatgttcttcctaaactgaagacaatggctctaagagatagagcagtatttgagaaa
ggcatgaaagcctttgtctcgtgtgtccaggcgtatgccaaacacgagtgtagcctgatc
tttcgcattaaagatctggatcttgccgctttggctcgtggtttcgccctcctccgtttg
cccaaaatgcctgaactgagaggaaagactttccctgacttcaaagaggagatcgcggac
acagacgccattcgttttaaagataaaaaccgtgagaaacagagacagaaaatgctagca
cagcagagagagaaatacaaagatatgccaccgaggaaaaactatgtcaagaacaaagcc
tggtctaagcagaagaccagaaaggacagaaagaaaaaagtagcagccaaaagaaaactg
aatgagggttcagatggtgacgatgaagacctcaatgagcttttaaatgacacgcgtgtg
ctgaagaaactcaagaagggaaaaatcagcgaagaggactttgaaaaacacataagttca
gcagggagctcaaagcacaaacaagccaccacgtctcatgaggacagttctgatggagac
ggagaatga
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