Myxocyprinus asiaticus (Chinese sucker): 127433271
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Entry
127433271 CDS
T08782
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127433271
03036 Chromosome and associated proteins [BR:
masi03036
]
127433271
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
127433271
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
127433271
SLIK complex
127433271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
127433271
NCBI-ProteinID:
XP_051540952
LinkDB
All DBs
Position
43:2587195..2881423
Genome browser
AA seq
1784 aa
AA seq
DB search
MDGRSEDESVSNSSGKSSNSDDESDSGSGSGSSSSSSSSSSSQSESSDSGSGSDSCSQSD
SDSEKSKKKDDQDNRIDGAAFWKSNPSILTVQRSAMLRKQLQQQQLQQQSSSSSDLDEDS
SSSDDSDDDSKSKSKGSGSDSNSGSDSGSGFGSGSSGSPAEEENRDESVSDYEPSHKVKS
RKPPNKASARNGKKSKAPKKKPFLSSADEEDDYKKVQAGPRRQATVNVSYKEDEELKTDS
DDLVEVCGEDVPPLEDDEFETLERVTEVRMGRKGATGAVTTVYAVEADGDPNANFDPNRQ
PGEVQYLIKWKNWSHIHNTWETEETLKQQNVKGMKKLDNFMKKEQEKKKWLKTASPEDVE
YLNCQQELMDDLHSQYQIVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSWEDGALIARK
FQKCIDEYMSRNQCKTIPSRDCKVLKQRPRFVPMKKQPHYIGADGLELRDYQLDSLNWMA
HSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQLWA
PLMNVVVYLGDINSRNMIRTHEWMHLQTKRLKFNILLTTYEILLKDKSFLGNVSWAIIGV
DEAHRLKNDDSLLYKTMIEFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFHSWELFEE
EHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQYYKWILTRN
YKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPEENEFYNKQEGLQHLIRSSGKLILL
DKLLVRLKERGHRVLIFSQMVRMLDILAEYLKYRQFLFQRLDGSIKGEMRKQALDHFNAD
GSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLV
TKGSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFGA
EELFKEQEGEEQEPQEMDIDEILKRAETRENDPAPSTVGEELLSQFKVANFSMMDDEEID
MDTDRSDKNWDDIIPEEQRRRLEEEERQKELAEIYLLPRMRKCAKQINFNGNEGRRSRNR
RYSGSDSDSVSDRKRPKKRGRPRTIPRENIKGFTDAEIRRFIKSYKKFGGPLERLDAIAR
DAELVDKSEHDLRRLAETVHNGCLKTLRENPCGPEKTSGGRRGKVKGPTFRISGVQVNAK
LVISHEEELASLHKAIPADPEERKRYIIPCHSKAAHFDIEWGKEDDSSLLIGIYEYGYGS
WEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQKQAGTVNSW
KRKPRGKKNKAVKPKVDEMTNSLSSLPPSDKSSEDEDEKEEEEKETPPVKPPNRKERATE
RVVEEEEESEEVPPVVKELEEEEIMEKMVKKDIKKEKNEESHDSKDREPKEKKEIKLEPV
HRGEESPAEKAVEVKTEAWEKNADTPVHTLAGGECIPASEETEELDQKTFSVCKERMRPV
KAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLREYTNPEQIKQWRKNLWIFVSK
FTEFDARKLHKLYKHAIKKRQENAQAVEQNISTVYTQSLKHTDIERMKELQQDDSSRDSY
SSDRHHSSSRYHEHSKERHPSDSYRKSSDSRKRPYPSFSNGKDHRQRERDHYRERGERQD
SRYFSDNKHRKLDHQSDSNSKDRMHSEHRSHSEHHPGSDYTHHKSSRDYRYHSDWQMEHR
VSGSGPRDQQSPYDSRSPLGHRSPFEYSSDHKSTPEQVWSSRKT
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atggatggacgcagtgaagatgaaagtgtcagcaacagcagtggaaagtccagtaactca
gatgatgagtctgattcaggatcgggctctggctccagctcaagcagtagcagctccagc
agtagccaatcagagagcagtgactcaggaagtggctcagattcctgtagccaatcagat
tctgactctgagaagtccaagaaaaaggatgatcaggacaacagaattgatggagcagcg
ttttggaagtccaaccccagtatcttgacagtgcaaaggtcagccatgctcaggaaacag
ctacaacaacagcagctccagcagcagagctcctcaagcagcgacttagatgaggactct
tccagtagtgatgactcggacgatgactccaaaagcaagagtaaaggatctggatccgac
tccaattcaggttcggactctggctctggtttcggaagtggctcctcaggctcccctgca
gaggaagagaacagggacgagtccgtgtcagactatgagcctagtcacaaagtcaagagc
agaaaacctccaaacaaggccagtgctaggaatgggaagaagagcaaagctccaaagaag
aagcccttcctatcctccgcagatgaagaggatgattataagaaggttcaagcaggacct
cggcggcaggccaccgtcaatgtgagctacaaagaagatgaggagctgaagactgattca
gatgatctggtggaggtctgtggagaggatgtcccgccactagaggacgacgagtttgag
accctggaaagagtgacggaagtgagaatgggacggaaaggagcaacaggggctgtgacc
acagtttatgctgtagaggcagatggagaccccaacgccaactttgaccctaacaggcag
ccaggagaggtgcaatacttgatcaaatggaagaattggtcccacattcacaacacctgg
gaaacagaggagactctcaaacaacagaatgtgaagggcatgaagaaactggacaacttc
atgaagaaagagcaggagaagaagaaatggctcaaaactgcttcacctgaggatgtggaa
tacttaaactgtcagcaggagctcatggatgatctgcattcacagtatcaaattgtggaa
cgaatcattggacattcaaatcagaagtcggctgcaggttatccagactacctgtgtaaa
tggcaggggctgccatactctgaatgcagctgggaagacggagctctcattgccagaaag
tttcagaagtgcattgatgaatacatgagccggaaccagtgcaaaaccatcccctccagg
gactgcaaggttttaaaacagagaccacggtttgtgcccatgaagaagcagcctcactat
attggtgcagacggcctagaactgcgggattatcagttggacagtctgaactggatggcc
cattcttggtgcaaagggaacagttgtatcctagcagatgagatgggtctaggcaaaact
atccagactatcagcttcctcaattacctgttccatgagcaccagctgtatgggcccttc
ctgctggtggtgcctctgtccaccctcacatcatggcagagggagatccagttgtgggcc
cctctgatgaacgttgttgtctacctgggtgacatcaacagcagaaacatgatccggaca
catgaatggatgcatctgcaaaccaagcggcttaaattcaacatcctgcttactacatat
gaaattctgctgaaggataagtcatttttaggaaacgtaagctgggcaatcattggtgtg
gatgaagcccatcggctcaagaacgacgactcactcctctataagaccatgatagagttc
aagtctaaccacagactcctgatcactggcacacccctgcagaactcactcaaagagctc
tggtctttactgcatttcatcatgcctgagaagtttcattcgtgggagctatttgaagag
gaacatgggaaaggaagagactctggttacaccagccttcacaaagagctagagcccttc
ctgctgcgcagggtaaagaaggatgtggagaaatctctgcctgccaaggtggagcagatc
ctcagggtggagatgagcgccattcagaaacaatactacaagtggatattgacaaggaac
tataaagccctgagtaaaggaactaaaggaagcacgtcgggctttctcaacatcatgatg
gagctgaagaaatgctgtaaccactgctacctcattaaaccacccgaggaaaatgagttc
tacaacaaacaagaaggcctacagcatttgattcgcagcagtggaaagctgattctcctc
gataagctgctcgtgcggctgaaggaacgaggccaccgcgtgctcatcttctcccagatg
gtcaggatgctggacatcctggccgagtacctgaagtaccgtcagttcttattccagaga
ctggacggttccataaagggtgagatgaggaagcaagcattagatcacttcaatgcagat
ggctcagaggatttttgcttcctgttgtccactcgagcaggtggtcttggcattaatttg
gcctctgcagatacagtggtcatttttgactcagactggaacccacagaatgacctgcag
gcacaggccagagctcataggattggacagaaaaaacaggtgaatatatatcgtctggtg
acaaagggatcagtagaggaggaaattattgaaagagccaaaaagaagatggtgttggac
caccttgtgattcagaggatggacaccactgggaagacggtccttcatacgggttcagcg
ccttccagttccactccattcaacaaggaggagctgtcggccattttaaagtttggtgct
gaagaactgttcaaagagcaggaaggagaagagcaagaacctcaggagatggatattgat
gaaatcctgaagagagcggagaccagggagaatgaccctgcaccatcaactgtgggagag
gaactcctgtcacagttcaaggtggcaaacttctccatgatggatgacgaggagattgat
atggacacggatagaagtgataagaactgggatgatattatcccagaggagcagcgaagg
agacttgaggaagaggagcgacagaaggaactagcagagatttatttacttccccgcatg
aggaaatgtgctaaacagatcaactttaatggaaacgagggcagacgcagccggaacagg
cgatactctggttcagacagcgattctgtctcggacaggaaacggcctaagaaacgagga
agacctcgaaccattccaagagagaacattaagggcttcactgatgctgagatacgaaga
tttattaagagttacaaaaaatttggtggtcctttagaaaggcttgatgctatcgcgcga
gatgctgagctggtggataaatcggaacatgatttgcggcggctggctgagacagtacac
aatggttgtctgaagaccctgagggagaacccatgcggacctgagaaaacctcaggaggc
agacgagggaaggtaaaaggacccaccttcaggatctcaggggtccaggtcaatgctaaa
ctggtgatttctcatgaggaggagcttgcatcattacacaaggccattcctgcagaccct
gaggagaggaagaggtatataatcccatgccactcaaaggcagctcattttgacattgag
tggggtaaagaggacgattccagcctgctcatcggtatctatgagtatggatacggtagt
tgggaaatgatcaagatggacccagacctcaacctcacacataagctcctaccagatgat
cctgacaagaagccacaagctaaacagctgcagactagagctgactacctcataaaatta
ctgagcaaagacctggccaagaaggaagcacagaaacaagccggcacagtaaattcatgg
aagaggaaaccgcgaggcaagaagaataaagctgtgaaaccaaaggtggatgagatgacg
aacagtctgtcctcattgcctccatcagataagagctctgaagatgaagatgagaaagag
gaagaagaaaaggaaacacctcctgtgaagccgcccaacagaaaggagcgggccacagaa
cgggtagtagaggaggaagaggagtctgaggaggtgccgcctgtggtaaaagagctggaa
gaggaggagataatggagaagatggtgaaaaaagatatcaaaaaggagaaaaatgaggag
agccatgacagcaaagacagagaaccaaaagagaaaaaggaaatcaagctggagcctgtg
cacagaggggaagagtctcctgcagagaaggctgtggaggtgaaaacagaagcgtgggaa
aagaacgctgatactcctgtgcacacactggcaggaggagagtgtataccagcttctgag
gagactgaagaactggatcagaagaccttcagtgtgtgtaaggagcgcatgaggcctgtg
aaggcagcgctgaagcagttggatcgtccagagaagggtctgtccgagcgagagcagctg
gaacacacacgtcaatgcctgatcaaaataggcgaccacatcacagagtgtctccgagaa
tacaccaaccctgagcagatcaaacagtggaggaagaatctttggatatttgtttccaaa
ttcactgaatttgatgcaaggaaactgcataaactgtataaacatgcaatcaagaaaaga
caagaaaatgctcaggcagtggagcagaacattagcactgtatatacacaaagcttaaaa
cacacagatatcgagcggatgaaggaattgcagcaggacgacagcagcagagacagctac
agctcagacagacaccactcatcatctcgctaccacgaacacagcaaagaacgccacccc
agtgattcgtacaggaagagctcagactccaggaagagaccctacccctccttcagcaat
ggcaaagaccacagacagcgagagagagatcactacagagagagaggagagcgacaggac
agcagatactttagcgacaacaagcacaggaagcttgaccaccaatcagacagcaactcc
aaggacaggatgcactccgaacaccgctcccactctgagcaccaccctggctctgactac
acacaccacaaatcttcccgagactatcgttaccattcagactggcagatggagcaccgg
gtgtcagggagcggcccccgagaccagcaatcgccatacgactctcgctcgccacttgga
caccggtcaccctttgagtactcatccgaccacaaaagcacacccgaacaggtctggagc
agccgcaagacataa
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integrated database retrieval system
