Myxocyprinus asiaticus (Chinese sucker): 127433817
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Entry
127433817 CDS
T08782
Name
(RefSeq) PDZ and LIM domain protein 5b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127433817
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
masi04990
]
127433817
Domain-containing proteins not elsewhere classified [BR:
masi04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
127433817
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
127433817
NCBI-ProteinID:
XP_051542017
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Position
43:36388154..36497344
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AA seq
616 aa
AA seq
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MSNNYSVSLIGPSPWGFRLQGGKDFSMPLTISRLTDGGKAAKAKINIGDVVLSIDGIATD
TMTHLEAQNKIKACTGNLNLSLQRSFAKMETTKNEALEIIKPVPISQSAAPATSSPANLV
PGNSAYNKTARPFGGTVNTVRSVSPSPAQTAPKAAIPSASSAFTPAAPSGQPPQPPFPLG
SSTNRPLSSPSSTPKPASGRSPFANSSSASSSGSSSPARVTAPPSVPTPPQPSVYNTPIN
LYSNQNACEVAMGQRRGLLESKSTGEQQNGTARKPVIEMEVNHVLSDASKKRLIEDTEDW
HPRTGTSQSRSFRILAQITGTENDQAQENRSGKKEVDEDVQPSSHATSSVKTMTKTPAGA
PRQGNGVTPTTTKNWQSGNTAGFPKAGAPVPQMGPSFGRVSNSVPKGPHRPAPQAHPKDQ
DDLLVQRAEHIPAGTRTPMCAQCNMVIRGPYLVAMGKSWHKEEFNCAHCHNSLADVGFVE
ERGSVYCEHCYEQFFAPECCRCQQKILGEVINALKQTWHVYCFLCVSCQQPIRNNTFHLE
DGQPYCDTDYYTLFGTSCHGCDFPIEAGDKFLEALGFTWHDTCFVCAVCTTSLEGQTFFS
KKDKPLCKKHAHTVQF
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaactacagcgtgtccttgatcggaccttctccctggggtttcagacttcag
ggtggtaaggacttcagcatgcccctcaccatctccagactgacagatggagggaaagca
gctaaagctaagatcaacattggagacgttgtgttgtctatcgatggcatcgccacagac
accatgacacacctggaggcccagaacaaaatcaaagcttgtacgggaaacttgaaccta
tcactgcagagatcttttgctaaaatggagacaacaaagaatgaagcactggagatcata
aagcctgtgcccatcagccaatcagctgcgcccgccaccagctcccccgccaacctcgtc
ccgggcaacagtgcctacaacaagaccgcacggccttttggcgggaccgttaatacagtt
cgatcagtcagtccatccccggcccagacagcgcccaaagccgccatcccctctgcctca
tctgcgttcactccagctgcaccttccgggcagccccctcaaccccccttcccgctgggc
agcagcaccaaccgcccgctgtcctcgcctagctccacccctaagcccgcctctggccgc
tccccctttgccaattcctcctcagcgtcctcttctggctcctcctccccggcgagagtg
acagcccccccatctgtccccacccccccgcagccctctgtctataacacgcccatcaac
ctctactccaatcagaatgcctgtgaggtggcgatgggtcagaggcggggtctgctggaa
agcaaatctacaggagagcaacaaaatgggaccgctcggaaacccgtcatagagatggag
gtgaatcatgtgctcagtgatgccagtaaaaagcgtctgattgaggacacggaggattgg
cacccgcgcacgggcacgtcacagtcacgatccttccgtatcctggcacagatcacaggc
acggagaacgatcaagcccaggagaatcggtccggaaagaaggaggtggatgaggatgtt
cagcccagttctcatgcaacatcttcagtcaaaactatgaccaaaacccccgctggagcc
cctcgacagggcaacggcgtcacaccaactacaaccaaaaactggcagtctgggaacact
gcaggatttcccaaagcaggtgcacctgtgccgcagatgggcccctcgttcggacgggtg
agtaacagcgttccgaagggtccgcatcgccccgcgcctcaagctcaccccaaagaccaa
gatgatttgctggtacaaagggccgaacatatccccgcgggcacacgcacacccatgtgt
gcccaatgcaacatggtcatcaggggtccgtatctggtggccatgggcaaatcgtggcac
aaggaggagtttaactgtgctcactgtcacaactcactggcagatgtggggtttgtggag
gagcgaggatccgtgtactgcgaacactgttacgaacagttctttgctcctgaatgctgc
cgctgtcaacagaagattctaggggaagtcatcaacgccctgaagcaaacctggcatgtg
tactgcttcctgtgtgtgtcctgccagcagccaatcagaaacaacacgtttcacctggag
gacggtcagccgtactgcgatacagattactacaccctctttggtaccagctgtcatggt
tgtgacttccctattgaagctggtgataagtttctagaggcgctgggcttcacttggcat
gatacctgtttcgtgtgtgcggtgtgcaccacgagtctagaaggtcagactttcttctcc
aagaaagacaagccgttatgcaagaaacacgctcacactgtccagttctga
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