Myxocyprinus asiaticus (Chinese sucker): 127434296
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Entry
127434296 CDS
T08782
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
masi04040
]
127434296
Ion channels [BR:
masi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127434296
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
DUF3447
DUF4349
Motif
Other DBs
NCBI-GeneID:
127434296
NCBI-ProteinID:
XP_051542893
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All DBs
Position
44:16535604..16590049
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AA seq
1108 aa
AA seq
DB search
MQFGKEFVRQSSFYKCVINEEESGLDSADVFELAFKGNASAIDRLNRKSPEDLSSRDENG
ANPLHYASAGGNLDIIRLIVSIVGPEELNVQDEQGRTTLHWAVEQNQGQSCALLLELGAN
PNLLNSALMAPLHLAITKGHNHLVELLLSCGKTDANLEGDLGNTPAMLACTNNNYQALHV
LFKHGAEMCRQNKLGHYAIHTVAFAGAKESMELVLKIGEEMGISSVVHINYLDKTRSSPL
HLAVRGGNTEVIKLCIIKGAKVDQQQCDRSTALHFACTQGAIEAVKIMLSSYNSVEDIIN
IRDGAYQTPLHRATLFDHVELAEYLVSKGAEVDCIDCKGLSPLLLGSSCGAWRTVVFLLS
KGADFKIKDKAGRNFLHFVTLQTKGLKNLPDTILQSTAVKQMLSDEDVEGCTPLHYACKL
GIHDSVKNMLGLNICVGQKSREKKSALHFAAEYGRINTCHRLLETLTDSKMLNEGDEKGL
TPLHLASRGGHTQVVDLLLRRGALFQSDYKGWSCLHHAAAEGYTQTMKILLAANVQLLDG
TNEDGNTALHIAAKAGHVGAVLLLLERGADITLNNAENSFLHEAVRNEKKDVVNATIESE
RCAEAMRSFKASSTSCCVVMDIIEFLPESFKHLLDQCMQESDLDANSPEYHIKYDFQWLQ
APIQLKKYAKTDKNMNFQPLAALNGMVQYNRLDLLTHPVSQKYLEMKWKAYGSKVHLLNL
AVYLLGLLPLTYLILNLRPSQDISTNGTSVIMVPVSFREQKYLISVCIIMVLVMNVYAIC
KELVQFSQQRIMYFTDYSNPADWTSAIGSLVFVIPMCFSVDNTWQWEAGAVAILTSWISF
LLYFQRFERVGIYVVMFGGIIRTLVCTLVLFVFLLLAFGLSFYALMLHRSEFSSISLSLA
QTFVMTVGELNYQSTFLDAYENGQMAFPGITYFVFVLFVLLMPILLMNLMIGLAVGDIAE
VQKNAELKRIAMQIDLHTTLEEKLPYWFLKRVDKPTITVYPNKCKKALMQVFIDGEIQNT
VRTRFNLCSRQGGPLERELRKQKKRLKEMSSVLDKQHNLLKLIIQKMEITSEADECDGPQ
NPRALRHITSSGQKSKWAPLMQALASRK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttggaaaagagtttgtgaggcaaagcagcttctacaaatgtgtgataaatgag
gaagagtcaggtctggattctgcagatgtgtttgagttggctttcaaagggaatgcttca
gccatcgatcgtttaaacagaaaaagtccagaagacctaagctccagggatgagaatgga
gcaaaccctttgcattatgcttcagctggtggaaacctggacataattcgactcattgtg
tctattgtaggccctgaggagctgaatgtacaggatgagcagggcagaactactctacac
tgggccgtggagcagaatcaagggcagagctgtgcattactgctggagctgggtgctaac
cccaacctcctcaacagcgccctgatggcccctttgcacctggctattacaaaaggacac
aaccatctagtagagctccttctgtcttgtggcaagacagatgccaatctggagggggat
ctgggaaacactcccgcgatgttggcctgcaccaacaataactaccaagctctccacgtt
cttttcaaacatggtgccgaaatgtgtcgtcagaacaaacttggccactacgccatccat
acggttgcttttgcaggtgccaaggagtctatggagctggttttgaaaattggagaggag
atgggtatttcctccgtagtgcacattaattatttggataagaccagaagcagtcccctc
catctggctgtacgtggggggaatacagaggtgatcaaactttgcatcattaaaggagca
aaagtggatcagcaacagtgtgacagatccacagccctccactttgcctgcactcagggc
gccattgaggctgtcaaaatcatgctttcctcttataacagtgtggaggacatcatcaac
attagggatggagcctatcagacccccttacatagagccacattgtttgatcatgtcgag
ctggctgaatatcttgtttcaaagggagcagaagttgactgcattgactgtaaaggtctg
tcccctctgctgctaggctcaagctgcggtgcatggagaacagtggtatttttactgtca
aaaggtgccgatttcaaaatcaaagacaaagcagggcgcaacttcctccactttgtgact
ctgcaaacaaaagggctgaaaaatctgcctgacacaatcttacagagtactgccgtgaag
cagatgttgtctgatgaggatgtagaaggctgcactcctctgcactatgcctgcaaactt
ggcatccatgactcagtaaaaaacatgctgggtctcaatatctgtgtgggtcagaagtcg
agagagaagaaatcagcccttcactttgctgcagaatatgggcgtataaacacatgccac
aggctgctggagaccctaacagactccaagatgttgaacgagggggatgaaaaaggtctg
acgcccctccatcttgcttcaagaggaggacacactcaagtcgtggatctgctgctcagg
aggggagccctctttcaaagtgattacaaaggctggtcctgtttacatcacgctgcggct
gagggatacacacagacaatgaaaatcctgctggcagccaatgttcaactgctggacgga
acaaatgaggatgggaacacagctcttcacatagctgcaaaggcgggccatgtaggtgct
gttctcctgttattggaaagaggagctgatataactcttaacaacgctgaaaactctttc
ctgcatgaggctgtgcgcaatgagaaaaaagatgtagtgaatgccaccatcgaaagcgag
aggtgtgctgaggcaatgaggtcatttaaagctagttcaacttcctgctgtgttgtgatg
gacatcatagagttcctcccggagtctttcaagcatcttctggaccagtgtatgcaagag
tcagaccttgatgccaacagtccagagtaccatatcaagtatgatttccagtggcttcag
gctcccatacagttgaagaagtatgctaaaacagacaaaaacatgaacttccaaccactg
gcagctctgaatgggatggtgcagtacaaccgactggatcttctcactcaccccgtgagc
caaaaatacctggagatgaagtggaaggcatatggaagcaaggttcatttgctcaacctg
gctgtctacctgcttggcttgctgcccctcacgtacctcatcctcaatctgagaccgagc
caggacatttccaccaatggcacatctgtcatcatggtgcctgtatctttcagagagcaa
aaatacttaatctcagtctgtataatcatggtgctagtcatgaatgtgtatgccatttgc
aaagagctggtacagttttctcagcagcgaataatgtacttcactgactactctaaccct
gctgactggacttcagccattggctctttggtctttgtaattcccatgtgcttcagtgta
gacaatacatggcaatgggaggccggagctgtggccattctgacatcatggatcagcttc
ctgctttacttccagaggtttgagcgagttggaatttacgtggtaatgtttggcggaatc
attaggaccctggtgtgcaccttggttctctttgtcttcctcttgctggcattcggcttg
tccttctatgctttgatgcttcaccgaagtgagttcagctcaatcagtctttccctggcc
cagacttttgtgatgacagtgggagagctgaactaccagagcacatttctggatgcttat
gagaatggccagatggcgtttcctgggatcacctattttgtgtttgtgctttttgttctc
ctcatgcccatccttctaatgaacctaatgattggtttagcggtaggagacattgcagag
gtacagaagaatgccgagctgaagaggatagccatgcagatagatcttcacactaccctt
gaggaaaagctgccatactggttcctaaaacgagtggacaaaccaactatcactgtctat
cccaataaatgcaagaaggcactgatgcaggtctttattgatggtgagatccaaaataca
gttcgcacccgttttaacctctgctcacgtcagggtggacctctggagagggaactgcgc
aaacagaagaaaaggttgaaagaaatgtccagtgtgcttgataagcaacataacttgctg
aagttgatcatccagaagatggaaatcacgtctgaggctgatgaatgtgacggcccacag
aatcctagagccctaagacatattacctcctcaggccaaaagtcaaagtgggcccccctc
atgcaagctcttgcatcaaggaaataa
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