Myxocyprinus asiaticus (Chinese sucker): 127434671
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Entry
127434671 CDS
T08782
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
masi04040
]
127434671
Ion channels [BR:
masi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127434671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
127434671
NCBI-ProteinID:
XP_051543525
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Position
44:6869759..6929850
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AA seq
797 aa
AA seq
DB search
MHISALPYSLSVIMAALYQGTDASSPDKYLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEEKRHGELNINCVDVLGRDAVTISIENENLDILQLLLDHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSA
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSNEDHINKRGLME
ERMNLSRLKLAIRYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTGLKILSVLSVALLWP
LLSVCYLLGPRSRVGQVIHTPFVKFIIHSASYFTFLLLLNLYSLVYNGNKKNIMGPALEL
IDYLLILWIVGMVWSDVKRLWYEGLEDFLEESRNQMSFVMNSLYLATFALKVVAHSKFKD
NVKDRKDWDAFHPILIAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKFL
GLFMLVLISFTIGLTQLYGKDQKDPSRSKDESKDCEGIFCQQQSNDTFHTFMGTCYALFW
YIFSLAHVALFVTRISYTEELRSFVGALIVGTYNIVVVIVLTKLLVAMLHKSFRQIANHE
DKEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLVISLSKWVCSHTSTGKVKRQNS
LKEWRNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMR
DLLGFRTSKYAMFYPRS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgctttgccgtattctctctccgttataatggcggctctttatcagggc
acggacgcgtcctctccggataaatatctggcgttaaaagacgtcagagaggtgaaggag
gagacaactctggatgagaagctctttctgctggcatgcgagaagggggactactacatg
gtgaaaaagcttcttgaggagaaacgacatggtgaattaaacattaattgtgtggatgtg
ctgggaagagatgctgtcaccatttcaattgaaaatgagaatctagacatattgcagttg
ctgctggaccatggctgccaggccacagatgcattattagtggctattgattcagaagtt
gtaggagctgttgacatcctgctaaaccatcggcccagacgctcttccaagccttctatt
gcgaaattgatgcagcgcatccaaaacccagagtattccaccaccatggatgttgctcca
gttattcttgctgcccacaggaacaattatgagattttgacaatgctcttgaagcaggac
atctctctgccccgacctcatgctgtagggtgcgagtgcaccctctgtaatgccaagaac
aagaaggacagtcttcgtcactcaaggtttcgtctagatatctacaggtgcctcgccagc
ccatcgttgatcatgctgacagaggaagaccccattctgagagcatttgaactcagcgct
gacctgaaagagctgagtctggtggaagtggagtttcggaatgattatgaagaactcgcc
aagcagtgcaagatgttcgccaaggacctgctggctcaggcccgcaactctcgcgagctg
gaggtgatcctgaaccacacttccaatgaagaccatattaacaagagaggcctaatggag
gagcgcatgaacctcagtcgcctcaaactggcaatcagatacaaccagaaggagttcgtt
gcccagtccaactgccagcagtttctgaacacagtgtggtttggtgagatggcgagctac
cggcgcaagcacacaggcttaaagattctgtctgttttgagtgtggcgctgctgtggccc
ctgctgtctgtctgctacctgctggggcctcgttctcgtgtgggacaggtcatacacacg
ccatttgtcaagttcatcatacatagcgcctcctacttcacctttctgctgcttctgaac
ctctactcactggtctacaatgggaataaaaagaatataatgggccccgctctggaattg
atagactaccttctaattctctggattgtaggcatggtgtggtcggatgtgaagcgtctg
tggtatgagggattggaggatttcctggaagagtcacggaaccagatgagcttcgtcatg
aattcactttatctggccacctttgcccttaaagtggtggctcacagcaagttcaaggac
aatgtaaaggacaggaaggactgggatgcatttcaccccatactgatcgctgagggactc
tttgcttttgccaatgttctgagctacctgcgtctcttcttcatgtacaccaccagctcc
atcttggggcctttacagatctccatgggccagatgcttcaagagtttgggaagtttctt
ggcttgttcatgctggtgctcatatctttcaccattggactgacacagctgtatggaaaa
gaccagaaggatccatccagaagcaaagacgaaagcaaagactgcgagggcatcttctgt
caacagcagagcaatgacacctttcacacgtttatggggacatgttatgccctcttctgg
tatattttctccctggcacacgtggctctgttcgtcacgaggatcagctacacagaagaa
ctgcgttcgtttgtgggagctcttatcgtcggtacctacaacattgttgtagtcatcgtt
cttaccaagcttctggtggccatgctgcacaagagtttcagacaaatcgctaaccatgaa
gataaggagtggaaatttgcccgtgccaaactgtggctcagctacttcgatgacaagtgc
accctgcctccacccttcaacattctcccttcgcctaaaactgtgtgttacttggtgatc
agcttgagcaaatgggtctgttctcacacctccaccggcaaggtcaagcgacagaacagc
ctcaaggaatggaggaacctgaagcagaaaagagatgagaactaccagaagatcatgtgc
tgtctagtgcaccgctacctgacatccacacggcagaagatgcagagcacagaccaggcc
acggtggagaacctcaatgatctgcggcaagacctctctaagttccgcaatgaaatgagg
gatcttttgggcttccgtacctccaaatatgccatgttctaccccagaagctaa
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