Myxocyprinus asiaticus (Chinese sucker): 127434769
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Entry
127434769 CDS
T08782
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127434769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127434769
03036 Chromosome and associated proteins [BR:
masi03036
]
127434769
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127434769
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
127434769
Chromatin remodeling factors
BAF complex
127434769
PBAF complex
127434769
GBAF(ncBAF) complex
127434769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
SnAC
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
127434769
NCBI-ProteinID:
XP_051543695
LinkDB
All DBs
Position
4:complement(27049602..27139573)
Genome browser
AA seq
1570 aa
AA seq
DB search
MSTPMEPPIGMSHAGPSPGVGLSPGPILVPSPGPGPSPGSVHSMMGPSPGPPSVPHVMLG
QGPGEYSQDSMHPMHKPMEGMHEKGMGEDMHYGQMKGVGMRSLHSGMGPPQSPMDQHNQG
YMSPHPSPMGQVPEHVPSPMSGGGPTPPQMPQGQSGPMIPMDPQGMGQQARGQSAFSPVQ
LQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQPNNSGLYNRPPGMPMPHGGP
ATGPRPTLAMQTHTHSSVPKPWPEGQGAETPSASQKLPIPTPSGRPSPAPPLVPAATQPV
PSTFLTPQPQPQSQSVPGQPSLIIQLQQKQNRITPIQKPQGLDPVELLQEREHRLQARIA
HRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRLDVVACMRRDTAVETALNSKAY
KRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSISGKIQK
LSKAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDE
YVANLTELVYEHKAAQAAKEKKRKRKKKKEAGDVEGMGAIGPDGEPIDESSQMSELPVKV
IQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGSEFEEEDEEEVVSRAESE
EKKVIDPNSDEVSETAAKHIIESAKQDVDDEYSVQAGQTSSQSYYGVAHAVIEKVEKQST
LLINGTLKQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIGLITYLMEHKRLNGPYL
IIVPLSTLSNWVYELDKWAPSIVKIAYKGTPSMRRSLVPQLRSGKFNVLLTTYEYIIKDK
HILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNF
LLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQ
LPEKVEYVIKCDMSAIQKVLYRHMQGKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICN
HPYMFPHIEESFAEHLEYPNGIISGADLYRASGKFELLDRILPKLKATNHRVLLFCQMTS
LMTIMEDYFAYRNFLYLRLDGSTKSEDRAMLLKKFNDEGSQYFIFLLSTRAGGLGLNLQA
ADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQK
VIQAGMFDQKSSSHERRAFLQAILEHEEQNEEEDEVPDDETLNQMIARNEDEFELFMRMD
LDRRREDARNPKRKPRLMEEDELPSWILKDDTEVERLTCEEEKIFGRGSRHRRDVDYGDT
LTEKQWLRAIEDGNLEEIEEEIRLKKRKRRRHVDKDRRREDVEKAKKRRGRPPAEKLSPN
PLKLTKQMNVIIDTVINYRDVSGRQLSEVFVQLPSRKELPEYYELIKKPVDFKKIKERVR
SHKYRSVSDLEKDVMLLCHNAQTYNLEGSQIYEDSIVLQSVFKSARQKIAKEESEDDSDE
DDDDEEESEAEFQAKSVRVKIRLSKREERRQDKGKKRRSRGKAKPMVSDDDSEEDQEENE
QSEGSHSDDE
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccccatggagccaccaattggaatgtcgcatgctggtccttcaccaggcgtt
ggcctgtcccctgggcccatccttgtgcccagccctggacccggcccctctcctggctct
gtacacagcatgatgggccccagcccagggcccccaagtgtcccacatgttatgctgggc
caaggacctggagaatattctcaggacagcatgcacccaatgcataagcctatggaagga
atgcacgagaaggggatgggtgaagatatgcactatgggcagatgaaaggggtggggatg
agatccctgcacagtggcatgggtcctccacagagccccatggatcaacacaatcaagga
tacatgtctcctcatccctcgccaatgggtcaggttcctgagcacgtgcctagccccatg
tcaggaggagggccaacaccaccgcaaatgcctcagggtcagtcgggccccatgataccc
atggatcctcaggggatgggacagcaggccaggggtcagtctgccttcagcccagtccag
ctgcagcaactcagggctcagattctggcttataagatcctagggcgtggtcagcccctt
cctgagaatcttcaattagctgtgcagggcaagaggagcctccccaccatgcagcagcag
cccaacaacagcggcctctacaacagacctccaggtatgccaatgcctcatggagggcct
gcaactggaccccgtcccactctagccatgcagactcacacacatagttctgtgccaaaa
ccgtggcctgagggtcaaggggcagagactcccagtgcctcacagaagctgccaattcca
actcccagcggcagaccatctccagctcccccactggtccccgctgccacccaacctgtc
cccagcaccttcctcaccccccaacctcaacctcagtcgcagtcagtaccaggccagccc
tcactcatcatacagctccagcagaaacagaaccgcatcacccctattcagaaacctcag
ggtctggaccctgtggaactcttacaagagagggagcaccggctccaggccaggattgct
cacagaattcaggagctggaaaatcttccagggtcattgccacctgatctacggacaaaa
gctaccgtggaactaaaggccttaagattactcaacttccagcggcagctaaggctggat
gttgtagcctgcatgcgcagggacacagctgtggagacggcactaaactccaaggcttac
aaacgtagcaagagacagacactgagagaagctcgcatgacagagaaattagagaagcaa
cagaagatcgaacaggagaggaagcgcagacagaaacaccaggagtatcttaacagcatc
ctgcagcatgcaaaggatttcaaagagtatcacaggtccatctctggaaaaatccagaag
ctgtccaaggccatcgccacctggcacaccaacacagaaagagagcagaagaaggagaca
gaacgcattgagaaagagaggatgaggagactgatggctgaggatgaagaaggttacagg
aagctgattgaccagaaaaaggacaagcgtttggcttacctccttcaacagacagacgaa
tacgtggccaacctgactgaacttgtctatgagcacaaggccgctcaggctgccaaggag
aagaagaggaagagaaaaaagaagaaggaagctggtgatgtcgaaggaatgggagctatc
gggcccgatggagagcccatagacgaaagcagccagatgagtgagctgccagtcaaagtt
attcagactgagactgggaaagtgctacaggggactgatgcccccaagtccagtcagtta
gaggcctggcttgagatgaaccctggctatgaagttgctccacggtcagacagcgaagag
agtggctcagaatttgaagaggaggatgaagaagaggtggtctcgagagctgaatcagaa
gaaaagaaagtcatcgaccccaacagtgatgaagtgtcggaaacagcagccaagcacatc
atagagtccgctaagcaggatgtggatgatgagtacagtgttcaggcaggccagaccagc
tcccagtcttactatggagtagcccatgcggtcatagagaaagtggagaaacagtccacc
ctcctgatcaatggaacactcaagcagtaccagatccaagggcttgaatggatggtgtct
ctatacaacaacaacctgaatggtattctggcagatgagatgggtctgggcaagaccatt
caaactatcggccttatcacatatctgatggaacacaagcggctcaatgggccatacctc
atcattgtaccactctcgactttgtccaactgggtttatgagctggacaagtgggcacca
agtattgtgaaaattgcctacaagggcacaccatcaatgcggaggtctttggtgccgcag
ctccgtagtgggaagttcaatgttcttcttaccacgtatgagtacatcatcaaagataag
cacattctcgccaagattcgctggaagtacatgattgtggatgaaggccaccgcatgaag
aaccatcactgcaagctcacgcaggtgttgaacactcactacgtcgctccaaggaggctg
ttgctcactgggaccccactgcagaataagctacctgagctctgggccctgctcaacttc
ctcttgcccaccatcttcaaaagctgcagcacctttgagcagtggtttaatgctcccttt
gctatgacaggagagagggtggatctaaatgaagaggagaccatccttatcattcgtcgt
ttgcataaggtattgcgtcccttcctgctgcgcagactgaaaaaagaggtagagtctcag
ttgcctgagaaggtggagtatgtcatcaaatgtgacatgtcagcaattcagaaggtgctt
tacaggcacatgcagggcaaaggcatcctgcttactgacggctcagagaaagacaagaag
ggtaaaggaggagccaagaccttaatgaacaccatcatgcagctgaagaagatctgtaat
catccctacatgtttccgcacatcgaggaatcctttgctgagcacttggagtatccaaat
ggcattatcagtggcgctgacctgtatcgtgcctcgggcaagtttgagttactggaccgg
atcctgcccaagctaaaggccaccaatcatcgagtgcttctcttctgtcagatgacctcc
ctcatgaccatcatggaggattattttgcctaccgtaacttcctctatctgcgtctggat
ggatccacaaagtctgaggaccgagcaatgcttttaaagaaattcaatgatgaaggctca
cagtatttcatcttcctactgagcaccagggcaggaggtcttggcctaaacttgcaggca
gcagacaccgttgtgatctttgacagcgactggaacccccaccaggacttgcaggcccag
gaccgagcccaccgtatcggccagcagaacgaagtacgtgtactgcggctttgtaccgtg
aacagcgtggaggagaagattctagcagcggccaagtataaactgaatgtggatcagaag
gtcattcaggcaggcatgtttgatcagaagtcctccagccatgagcgcagagccttcctg
caagctattctggagcatgaggaacagaatgaggaggaagatgaagttccagatgatgaa
actctcaatcaaatgattgcccgtaatgaggatgaatttgagctcttcatgcgcatggat
ttagaccgtcgtcgagaggacgcacgcaacccaaagcgtaaacctcggctaatggaagag
gatgagttgccatcatggatcctgaaagatgatacagaggtggagcgactcacctgtgag
gaagaaaaaatcttcggacgaggatctcgtcatcgcagagatgttgactacggcgacaca
ttgacagagaagcagtggctaagggccatagaagatggcaaccttgaggaaattgaggag
gagatacgcctgaagaagcgcaagcgtcggagacatgtggacaaagacagaagacgtgag
gatgtagagaaggccaagaaaaggagaggacgccctccagcagagaagctctccccaaac
ccactcaaactcacaaaacagatgaatgtcatcatcgatactgtgatcaattacagagac
gtatcaggccgtcagctcagtgaggtctttgtgcagctgccctccaggaaagagctccct
gaatactatgagctgataaagaagccagtggacttcaagaagattaaggagcgtgtgcgt
agccacaagtacagaagtgtgagcgatctggagaaagacgtcatgcttctttgtcacaat
gctcagacttacaatctggagggctctcagatctatgaggactccattgttctccagtca
gtattcaagagtgccagacaaaagattgctaaggaagaaagcgaagatgacagcgacgag
gatgacgatgacgaggaagaatcagaggcagagttccaagctaagtcagtgagggtgaaa
attaggctgagcaaacgggaggagagacgtcaggacaaaggcaagaagagacggagccgt
ggaaaggctaagcccatggtcagcgatgatgacagcgaggaagaccaggaggagaacgag
cagtcagaggggagccacagtgacgatgagtga
DBGET
integrated database retrieval system
