Myxocyprinus asiaticus (Chinese sucker): 127434877
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Entry
127434877 CDS
T08782
Name
(RefSeq) laminin subunit beta-1-like isoform X1
KO
K05636
laminin, beta 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04510
Focal adhesion
masi04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127434877
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127434877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
127434877
NCBI-ProteinID:
XP_051543873
LinkDB
All DBs
Position
45:complement(6690204..6793180)
Genome browser
AA seq
1767 aa
AA seq
DB search
MWIFRIAALTIFTGLRVLAQYPDHNDMCTKGSCYPATGDLLIGRAHRLIASSTCGLDGLE
TFCIGEKECFKCDSRKMYNEFTNPISHTIENVVTNFAPNRLKTWWQSQNGVENVTIQLDL
EAEFHFTHLIMTFKTFRPAAMVIERSSDFGQSWQVYRYYAFNCANSYPHVPQGPIKKVDD
VICDSRYSVIDPSTEGEVIFRALDPAFVIPDPYSPFIQNLLKITNLRIRMEKLHTLGDDL
FDDREEVRQKYYYSLYDMVVRGNCFCYGHASKCAPVCSDSGVEGMVHGHCMCNHHTTGLN
CEECEEFYQDLPWRPAEGRNTNACKKCECNHHSHSCHFDMAVYLSSGNVSGGVCEDCQHN
TQGQWCESCKPFYYQHPERDIRDPNICQPCDCDPQGSLNEGLCDSATNVLRDMIAGQCRC
KANVEGERCDHCKKGHYGLSDDPLGCQSCSCYALGTLLAGRPCDIQTGSCFCKRLVTGQN
CDQCLPQHWGLSTDMDGCRPCDCDIGGALNNDCSPETGQCVCKEHMFGRRCDQVQSGFYF
ADLDHYTYEAEKASFGLAVKVVQRPLPLDRKSTWTGTGFVKVPEGETLRFNIHNFPRSME
YNFMIRYEPLLPDEWEQVVVTVERPRTGYPSAHCTSTYNDEQTVSLHPGSRYVVLPGPVC
LEKGQNYTVKISFPLYSSYSYHSSPHTLIDSIVLMPELQDLDLFSGGPQQYEDWEMFQKY
RCMERSQNVIKIPMTDICRDYIFSVSALMHNGALECRCDLHGSLSSVCDSSGGRCQCRPN
VSGRNCDTCAPATYLFGSSGCRPCECHPLGSQNAFCHHSTGQCLCVPGAYGRQCANCRPS
HWGFPQCQPCFCNGHSDQCHQRTGKCLDCRGHTIGHHCERCASGYHGNPLLGSSEQCRPC
MCPDGPGSGRQFAENCYQNQYSLQTVCFCSRGYKGSRCEECAPGYYGNPQVPGGRCHPCQ
CNGNINMQDPESCDARTGVCLKCLFHTDGNACQFCIYGYYGDAHTQNCRRCMCHPVGSVR
QSCTDGLCDCDRISGQCPCLPGVEGQQCDLCVPDTWNINSGKGCQPCQCHPEHSYSSSCD
LLSGQCSCKPGFGGRTCEECRELFWGDPEVKCHACDCDPRGAATQQCNKMSGECLCVEGV
AGRRCDSCGRGYVGTFPDCELCHQCFHKWDVNVGELTNHTQRLVDTVEELKESGVRTPFK
DIVSSLEDDMRQLRQILKDEKVHQTLTHTETVMRQANEMASVLRQSIERSKMDLEQISSD
RQKATENLNSLTEEAQNLQKTSMDKQRQVLNIKHSDLRGALDGIREYYKESAEAEFRTSQ
AVTDPDNTVKQSARTRQAAEAKLDTTKNEFNLKHQLHGQRLDKITYELNSKDLSELSHQV
CGGSSGLDGCSACGGLGCVNEDGVSQCGGDGCETIVTRSQDALNKAENFDQEILQALREV
DKLQKMVSDARGRTDEAKLNTQDVLLRANQSKARVEQTNEELRDLIQQIRHFLTNATDPK
RIEEVADEVLKLSLPVSSGVLKNVTTEIRHHVARLTSVDNIITQTEEQAHSAERLLQRAQ
AASERTTALKQATDEIRETLDDTERAQSAASEKLKEAESDTDLSRQQITVVQSKTEATEF
KLSSGTGRFLDLENEVDKLRRKTLEVSSSAEHIHRRSEYITTETEQTERDFDSVVQPKYQ
LVSGLIDQKAAAVFDAREKAEQLRQEAKDLLIDSTNKLQRLRELERSFSVNQHTLVAKAQ
ELDALENEARDVLQELIQKITVYSTCS
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atgtggatatttaggattgcagctcttactatattcactggtttgcgcgtcctggcacaa
tatcccgatcacaatgacatgtgtacaaaagggagctgttaccccgctactggcgatcta
ctgattggaagagcacatcggcttattgcctcctccacctgtggactggatggactagag
acattctgtattggtgagaaggaatgttttaaatgcgattcccgaaagatgtacaatgag
ttcaccaatcccattagccataccattgagaatgtggtgacaaacttcgctcccaaccgt
ctcaaaacctggtggcagtcccagaacggagttgaaaatgtgaccattcagctggacttg
gaagccgaattccacttcacacacctcatcatgacctttaagacctttcgtcctgctgcc
atggtgatcgagcgttcttcagattttgggcaaagctggcaggtgtaccgttactacgct
ttcaactgcgcaaactcctatccacatgtccctcaagggccaatcaaaaaagtggatgat
gtcatttgtgacagtcgctattctgtcattgatccgtcaacagagggagaagtgattttc
agggcacttgatcctgcatttgttattcctgacccttacagtccatttattcagaactta
ctaaagatcacaaacctgcgcattcggatggagaagttacacactctaggtgatgatctg
tttgatgatcgagaggaagtgagacagaaatattattattctctttatgacatggttgtc
cgaggcaactgtttctgctatggccacgcctccaagtgtgcaccagtctgcagtgattct
ggagtcgagggcatggttcatggtcattgtatgtgtaatcaccacactactggactgaac
tgtgaggagtgtgaggaattttaccaagatctgccctggagaccagcagagggccgcaac
acaaacgcatgcaagaaatgtgagtgtaaccaccactcgcattcctgtcactttgacatg
gcggtgtatctttcatctggaaacgtgagtggaggagtgtgtgaggattgtcaacacaac
acacagggccagtggtgtgagagctgcaaacccttctactatcagcacccggagagagac
atcagagaccccaacatctgtcagccctgtgactgtgacccacaggggtctctcaacgaa
ggcttatgtgatagtgctacgaatgtgctcagagatatgattgctggacagtgtcgctgc
aaagctaatgtggagggagaacgctgtgaccactgtaagaaaggacactatggcctcagc
gatgatccattgggatgtcagtcatgcagctgttatgctctcggcacactcctggcagga
cgtccctgtgatatacagacaggaagctgcttctgcaaacgtcttgtcactggacaaaac
tgtgaccagtgtctgcctcagcactggggtctcagtacagatatggacggctgcagacca
tgtgactgtgacataggcggagctttgaataatgattgttctccagagacaggacagtgt
gtatgcaaggagcacatgtttggcagacgttgtgaccaggtgcagtccgggttctacttt
gcagatctggaccactatacctatgaagctgagaaagcttcctttggactggcagtgaaa
gtggttcaaagaccattgcctctggatcgtaaatccacctggacaggtactggctttgtg
aaagttccagagggggaaacattgagattcaacattcacaatttccctcggtctatggaa
tacaatttcatgatccgctatgaaccactgttgccagatgaatgggagcaggttgtggtg
actgtagagcggcccaggactggttacccatcagctcactgtacgtctacatacaatgat
gaacagactgtttcactgcaccctggatccagatatgtggttcttcctggtccagtgtgt
ttggagaagggtcagaactacacagtgaaaataagcttcccgctgtattcatcatacagc
tatcactcctctccacacacactcatcgattcaatcgtgctgatgcccgagttgcaggat
ctggacctgttttcaggaggaccacagcagtatgaggactgggagatgttccagaagtat
cgatgtatggagcgcagccagaatgtcattaaaatccccatgacagatatttgcagagat
tacatcttcagtgtgtctgcactaatgcacaatggagctctggagtgcaggtgcgacctg
catggctctctgagctcagtctgtgactctagcggtggacggtgccagtgtcgacccaac
gtttcaggcagaaattgtgacacctgtgcccctgcaacctacctgttcggatcctcagga
tgtagaccatgtgaatgtcacccactgggctctcagaacgctttctgccaccacagcacg
ggacagtgtttgtgtgtaccaggggcatatgggcgccagtgtgcaaattgtagacccagc
cactggggcttccctcagtgccagccatgcttctgtaatggacatagtgaccagtgccat
caacgtacgggcaagtgtttggactgcaggggccacaccatcgggcatcactgtgagagg
tgtgcgagtggttatcatggcaatccattgctgggctccagtgagcaatgtcgcccctgt
atgtgtcctgatggcccaggaagtggcaggcagtttgctgagaactgttaccaaaatcaa
tactcccttcaaacggtctgcttttgcagccgaggttataaaggatccaggtgtgaggaa
tgtgcccccggttactacggtaaccctcaggtgccaggtgggcgatgccatccatgccaa
tgtaatggcaacattaacatgcaagacccggagtcctgtgatgcccgcactggcgtctgt
ctcaaatgcctgtttcacacagatggcaatgcatgccagttttgtatttatggttattat
ggagatgcccatacacagaactgcagaaggtgtatgtgccatccagtgggcagtgttagg
caaagctgtactgatggtctatgtgactgtgaccggattagtgggcaatgcccatgtctg
cctggcgttgagggtcaacagtgtgacctctgcgtccctgacacatggaacatcaatagt
ggaaaaggatgccaaccctgtcagtgccaccctgaacactcctatagttcttcctgtgac
ctgctgtcaggtcagtgttcctgtaaacctggttttggaggcaggacatgtgaggagtgc
agagagctgttctggggtgatcctgaggtcaaatgtcacgcatgtgactgtgacccgcgc
ggcgctgctactcaacagtgcaataagatgtctggagagtgtttgtgtgtagaaggcgtg
gctgggcgtcggtgtgactcctgtgggcgtggctatgtggggaccttccctgactgtgag
ctgtgtcatcaatgcttccacaagtgggatgttaatgttggagaactgaccaatcacacg
cagaggctggtggacacagtggaggagttgaaagaatcgggcgtgaggacgccctttaaa
gacatcgtatccagtctagaggacgatatgagacagctcagacaaatattgaaagatgaa
aaagttcatcaaactttgacacacacagagacggtgatgcggcaggccaatgagatggca
tcagttctgcgacagtctatcgagcgatctaaaatggatctggagcagatatcaagtgac
cgtcagaaagccacagagaacttgaacagtctgacagaggaggcccagaacttacagaag
acctccatggataaacaacgacaggttctgaacatcaaacactcagacctcagaggtgca
ttggacggcatcagagaatattacaaggagtctgcagaggctgagtttcgtaccagtcaa
gccgtcactgatccagacaatacggtgaaacagtctgccaggacacgccaagccgcagaa
gccaaactagacacaacaaagaatgaattcaacctgaaacatcagctacatggacagaga
ctggacaagattacatatgaactgaactccaaagacctctcagaactaagccatcaggtg
tgcggagggtcgtcaggtctagatggttgcagtgcttgtggtggtttgggctgtgtgaac
gaggatggcgtgtctcaatgtgggggtgatggatgtgagacaatagtgactcgatctcaa
gacgccttgaacaaagctgaaaactttgaccaagagatcttacaagctttaagggaagta
gacaagcttcaaaagatggtgtcagatgctcgaggacgtacggatgaagccaaactcaac
actcaggatgtgttgctgagagccaatcagagcaaagcacgagtggaacagaccaatgag
gagctcagagatctcattcagcaaatacgacactttctcacaaatgccacagatcccaag
cgtatagaggaagtagctgatgaggtgttgaaactgagtttgccagtgtcgtccggggtg
ttaaagaacgtcactacagagattcgccatcatgtggcccgactgaccagtgtggataat
attatcacccagacagaagagcaagcccactctgcagagagactcctgcaacgagcacaa
gctgccagtgagagaactacagcacttaaacaggccactgatgagataagagaaactcta
gatgatactgagcgtgctcagtctgctgccagtgaaaaactgaaagaggctgagagtgac
acggacctctcaagacaacaaatcactgttgtccaatctaagacagaagcaactgagttt
aaactgagtagcggcacaggaagatttttagatcttgagaacgaggtggacaaactccga
cggaaaactctagaagtgtccagtagtgcagagcacattcacagacggtctgagtacatc
acaactgaaactgagcaaaccgaacgggattttgactcagttgtgcagcctaagtaccaa
ctggtcagcggtctgattgatcaaaaggcagcagccgtgtttgatgcacgtgagaaggca
gagcaactacgacaggaggcaaaagacctattaatagattccacaaacaaactacagaga
ctaagagagctagaaagatctttttcagtaaatcagcacaccctggtggcaaaagctcag
gagttggatgcacttgagaatgaagccagagatgtactgcaagaactgattcagaaaatc
acagtctacagcacctgctcttaa
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