Myxocyprinus asiaticus (Chinese sucker): 127435057
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Entry
127435057 CDS
T08782
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
masi03009
]
127435057
Ribosome biogenesis [BR:
masi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127435057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
127435057
NCBI-ProteinID:
XP_051544163
LinkDB
All DBs
Position
45:complement(27029674..27058093)
Genome browser
AA seq
2806 aa
AA seq
DB search
MKLKNKPSSHKSENTFRFRTFSERLANVNIDVIHRIDRTGSYAEEVETYFFEGLSKWRDL
NLTEHFTTFLREVSNKSQSFNMLVFHQNAIVESLKTHMLVKNSMAYQPLLDLVVQLARDL
QMDFYPHFTDFFVIITSLLDTQDTEVLEWAFTCLSYLYKYLWRLMVKDMDKIYSLYSKLL
SHKKDHIRNFAAESFSFLMRKVPDYDALFTLMFMDLTNHPQKAKGVGQLIFEMCRGVCNM
FHSCATKALPVVLRKLGPAVGQDVVLSWDTIKEALDHMVESSANYVDREHLLLLWDSLED
SLKEVLGKLETSDTNQANEHMERVLYVYHTLVEHRKGAKITKPLSVYETLLQLVQASGLS
YSCCRLLLQIFTSLLMGENISLPASSIQELVKKVFQSRMDRDLILSFAKEVFDMKQFEQL
FLPSMLQYLEQLFLSEDSVNRQLVLELLVGLILSKAPPPTDGSMAFEKYPLVFTGHTVRS
TGPEREQAISVPQQILSLIDIPVDQTLSDLSHPWAALVLLPHVRPLEAASVIPTVTALLN
RLLREVCSETLGRGGLFVARQALSTLHSFKETAAVLSLLPVELIRNTLEKFPTDLSALLL
GDLYYTRLSLIGCTAQLSQDSLLELYHILQSNFSSNISKIRLLTLRMMSNFEANLRKPAE
GEESSNSQTVFAICLQAEQIPATVQDYREKLLHLRKLRHDLVQPCLPQGPFHEVPLRYLI
AMLFINFRPLWDAVIDLIVTHAKDMDSKSFWKVYYEHLVMVAGLAEEELQAEDEDDEEDG
GGKGQSSGQNRGPGTDVIDSGDVGVLFLEQLDLAADPSERTDFTNFRGLLWQAMAMFPER
VEPRSRELSPLLLRFISNEFYPADLLVAPTQDLTKKSSSSSEQEMGEEADADMEEDKEED
SKQSKRKMPRRAAAKQLFAHLKVFSKFTNPKALYLEPSLNELYTQLLCHKDQLIQKIALD
CLMAYKDPNILPYKENLENLLDDKHFKDEIVHFNISEEGAVVLPSHRPKLIPILMRILYG
RMRTRVGNKFQGKASSASRSSIVLRFLAGCQPEEMGMFIDLLLEPICHHNEGACLAAVER
AVAETNPCAVLPMGRQQSLLNIIDVIIHKLGHHIYIYLPKLLQILLCITASVSVILDHRE
QLKSGCISALKNLRRLGILHIQEFFDGFDSYSFTSDELDAVFKAVVWPQVCRLSTESPYA
PTPLLKLIRLWSQNAKFFPLLAKQRPGHPECDVLLNVFALLSAKHLSSNTTTMVMDIAES
LLNTPDFIPTEKESELCVNDCVIPEHEQSSDITEPLMVGCRLLLPHIPALLQYLSGVVQN
SERFKKKQFRTQVSKELSILSKISRFVTDKGQSSALISLLLPYLNNSKTAQETEMDILAT
MQNLLKQCSEPSTFLKPLSKLFSVIHNRLPRQALCEVFQTLSDIDSELKYITDVAVQLSA
FDSRHLDEIHFDVRLVAFQKINKHIKEMSTLDMRYLTVVMHNCFHSFTIGDMSLADIATM
CLSTIITRLSELGCPEADYKEIVQYTILDALRKGLKSKIESVRNDYTTVLACLVKTFPNR
SEFRELVQLTNYTDPESDFFEHMKHIQIHRRGRALRKFAKQLTEGTIVMSSRSMQNYIMP
YAMIALFDEKLLKYEAMTAAAVELIGAVCKRLTWSKYLFYLKHFVHVLQTGLAEQKLAVS
LLVTVLEAFHFDHETLSKEIKAAKPRKTEETSNVEEDAEKEPAETIDMDRSDAEAAMETD
DAGAAVSTATEAMDTEIQDSAKPKVPTESQAKKAPPVVSSGLPKSKEDLEALISSIHHTV
TQSVLPKLQKCLIAKVKRDDEHKMVKSKEVKDEEVLRVPIAFAMVQLMKSLPQEVMEANL
PGILLKVCVHLRSRFQEIRDVARTTLVKIIETLGHKYLHYLLKEMQGVLVKGYQVHVLTF
TVYHLLSVLKPSLTGGDLDPCMDMLIAIFNNELFGAVAEEKVIKGIVSKVMEARHSKSSD
SYELLAQFCSQERVVHLILPFKEILENTASLKVSRRVHAVFRRIVAGLLLNKSMTPQSIL
LLSHGLISQSLQLITSKSIEKPLPPPDPRLPPPSCLLLPPIPKRGGVKAAISSRTNMHIL
VETGLSLLHGSLRSSKVNSSVASIQEMLDPFVSLLLDCLNSMHVKVITEALQAFIWILKF
PLPAVEQNFEQLTKQLFVLLKDYAKAGAGRGENFHLVQNCFKAITVLVKSVTKHISETQL
QVLLGYAEEDIHDNSRQATAFGLLRAILSRKLVVPEMEDVMTKVAKLAISGTNEQVRVRC
RQIYLKYLMDYPLGKKMRKHFDFIVAQLGYEYDTGRQSCLEMMAFIFQTFPQKLLHEHCG
LFFVPLSLDMLNDDSASCKKMAALAIKSLLNRIDLQHQNSMFILVNNWLTGEKTSLRRLG
AQVCGLFAEVEGEKFSRRIEALIPFIETEINVSNFEDIEEEEDEKAADRLLFCYLTLIVK
LVKDCRFLELQKPKDLLNNIWGHIDSHLRYPHSWVWLTASQIFGLLFSAHKPEDLVTLWN
SQENTQKTTQRVATDFLSQNLDKKMRELVLSFCYQLQSKYLDIAAGEQVIKNLLYVAKVI
YHISPESETANPTEEQEEVTGLEEETTDNMEENEGEVEDKELQEEKELEEQENENRPPTL
LWVMKKLLLLAKREAAVTPKVPLKRTCVFKFLGAIAVDLGKDRLGPYLTTIIAPLYRELD
STYADQDPTLKNLAQELIELLKKLVGLERFSLAFATVQKEAVQRRTSRKKQKAMQAVVNP
DIAARKKVKKQLKKTEAKKRKFESVRSGHKAKKSKRSSLRDLAMIK
NT seq
8421 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaaaaacaagccctcatctcataagtcagaaaacactttccggtttcgcacg
ttttctgagaggctcgcaaatgtaaacattgatgtcatccatcgaattgatcggacggga
agttatgcagaggaagtagaaacctatttttttgagggcctatcaaaatggagagacctg
aatttaacagaacacttcacgacatttctacgagaggtgtcaaacaagagccagtccttc
aatatgctggtcttccatcaaaatgccattgtggaaagtctgaagactcacatgttagtg
aagaacagcatggcttaccaacctttactggatcttgtagttcagcttgcacgagacctc
cagatggacttttacccccacttcactgatttctttgtcatcatcacatctttactggac
acacaagacactgaggtgttggaatgggccttcacatgcttgtcttacctgtacaaatac
ctctggagactgatggttaaggatatggacaagatatacagtctttacagtaaacttctg
tctcacaagaaggatcacattcgtaactttgctgctgagagcttctcttttttgatgaga
aaggttccagattatgatgctctcttcacactcatgttcatggatctaactaatcaccct
cagaaggcaaaaggagtaggtcagctgatctttgagatgtgtcgaggagtctgcaacatg
ttccactcctgtgccactaaggctcttccagtggtgctgcggaagcttggcccagcagtc
gggcaagatgttgttctgtcttgggacaccattaaagaagctctggatcatatggttgag
tcttcagccaactatgttgacagagagcacctgctgctgctgtgggactctttagaggac
tctctaaaagaagttcttggaaagctagagacgagtgataccaaccaagctaatgaacat
atggagagggtcctgtatgtctaccacaccctggtggagcatcgcaaaggagccaagatc
acaaaaccactgtctgtctatgagacacttcttcagctagttcaggcatcaggactttca
tactcctgctgcaggctgcttttacaaatattcacatccctattgatgggggagaatata
tcattacctgcaagcagtatccaggaactggtgaaaaaggtcttccaaagcaggatggac
agagatctcatattgtcatttgcgaaagaggtgtttgacatgaaacagtttgagcagttg
ttcttgccaagtatgctacagtatcttgagcagctgttcttaagtgaggactctgtgaac
agacagctggttctggagctgctggttggtctgattctgtccaaagctccgccccccact
gacggctccatggcttttgagaagtaccctttggtcttcaccggacatactgtcaggtcg
actggtcctgaaagagaacaggcaatctctgttccccagcagatcctgtctcttatagac
atccccgttgaccagacactctctgacctttcccatccttgggctgcattggtgcttctc
ccacatgttaggccgttagaagcagcgagtgttataccaaccgtcactgcactgctgaac
agattactgcgtgaagtgtgcagtgaaacactgggaagagggggactctttgtagcccga
caggctctaagcacactgcacagcttcaaggagacagcggcagtattgtcactgctgcca
gtagagctgatcagaaacactttagagaaattccccactgatctttcagcattgttgctg
ggagatctgtactacaccagactctcactcatcggctgcacagctcagctatcccaagat
tccctgctggaattgtaccacattctacaatccaacttttcttcaaacatttccaagatt
cgcctgctgactctcagaatgatgtccaactttgaggctaatcttcgtaaaccagcagag
ggagaggagagctccaattcgcagacagtgttcgccatctgtctgcaggcagagcagata
ccagccacagtgcaagactacagggaaaagctgctacacctgcgtaaactgcgccatgac
ctcgtgcagccctgtctgccccagggacctttccatgaggttccacttcgttatcttatc
gcaatgctgttcatcaatttcagacctctgtgggatgctgtcattgatctgatagtgacc
catgcaaaagacatggacagcaagtcattctggaaggtctactatgaacatctggtgatg
gtcgcaggtttagctgaggaagagcttcaggcagaagatgaagacgacgaggaggatggc
ggtggtaaaggtcaatcctcagggcagaacagagggccggggacagatgtgattgacagc
ggagatgtgggagtactgtttctggagcagctggacctggcagcagaccccagcgaacgt
acggacttcaccaacttccgcggcctgctgtggcaagccatggcaatgtttccagaaaga
gtggagccacgaagccgagagctcagcccgttactgctgcgattcattagtaatgagttc
tacccagccgacctgctggtggctcccacccaagacctcacgaagaagagcagctcttca
tcagagcaagagatgggtgaagaagcagatgctgacatggaagaagataaggaggaagat
tccaaacaatccaaaaggaagatgccgagaagagcagcggccaagcagctttttgctcac
ttgaaggtcttctccaaattcaccaaccccaaagctttatatctggagccaagcttgaat
gaactatatacacagcttctgtgccataaagaccagctaatacagaaaatagccctggac
tgtttgatggcatacaaagacccaaacattctaccttacaaagagaacttggagaatctt
ctggacgataagcatttcaaagatgaaattgtccattttaacatctcagaggaaggagca
gtggtgctgccatcacaccgacccaaactcatccccattctaatgaggattctgtacggg
cggatgcgcactagggttggtaataagtttcagggtaaggcgagctcagcctcacgctcc
tcgatagtgctgcgcttcctggccggctgccagccggaggagatgggcatgttcatagat
cttctgctggagcccatctgtcatcataatgaaggagcatgtctggctgcagtggagcga
gcagttgctgaaacaaacccatgtgctgttctccctatgggtcggcaacagagtctactc
aacatcatagatgttatcatccataaactgggtcaccacatctacatctacctgcccaaa
cttctgcagattctgctgtgcatcacggcctctgtgtcagttatactggatcacagggag
cagctaaagtctggttgcatcagtgccctgaagaacttgcggcgtctggggattctgcac
attcaagaattctttgatggctttgactcgtacagctttacttcagatgagctagatgct
gtgttcaaagccgtagtgtggcctcaggtgtgtcgtctgtccactgaaagcccatatgca
ccaacacccctcctgaagctcatccgtttgtggagccaaaatgccaaatttttccccttg
ctcgctaagcagagaccaggccaccccgagtgtgatgtcctgctcaatgtttttgctctg
ctatccgccaaacacttgtcttccaacacgacaaccatggtgatggacatagcagagagt
ttgctgaacactccagacttcatacccacagaaaaggagtcagagctgtgtgtgaacgac
tgtgtgatcccagagcatgaacagagctctgacatcacagagcctttgatggtcggctgt
cgtctgctacttcctcatataccagcactgctgcagtacctcagcggagttgtgcagaac
tctgaacgcttcaagaagaagcaatttagaactcaagttagcaaagagctcagcatcctc
tccaagatcagcagatttgtgactgacaagggacagagttccgcactgatcagtttgctt
ttaccgtatcttaacaattcaaaaactgctcaggaaacagagatggatattctggctaca
atgcagaacttgctgaaacagtgttcggagcccagcacattcctcaagccactcagtaaa
cttttctctgtcatccacaacagactccctcgtcaggctctgtgtgaggtgttccagact
ctgtcagacatcgacagtgagctgaagtacatcacagatgttgccgttcagctcagtgcg
tttgacagtcgacatctggacgagattcactttgacgtgcgtctggtggcgttccagaag
atcaacaagcacattaaggagatgagcacgctggatatgagatacctgactgttgtcatg
cataactgctttcattcttttacaattggggacatgtctttggctgacattgccacaatg
tgtctgtcaacgataataacacggctctctgaattgggatgcccagaggcggattacaaa
gagattgtgcagtacacaatattggatgcactgcgcaagggcttgaagagcaagattgag
agtgtacgaaatgattacactacagttctggcctgcctggtgaagaccttcccaaaccga
tctgagttccgtgaactggtgcagctgacaaactacactgatcccgagtctgatttcttt
gaacacatgaagcacatccagattcacagaaggggacgagctctcaggaagtttgccaaa
cagctgaccgagggcacgattgtgatgtcttcacgctcaatgcaaaattacatcatgccc
tacgccatgattgctctgtttgacgaaaaactgctgaagtatgaagccatgacagcggca
gcagttgagcttattggtgctgtgtgcaaacgcctcacctggtccaagtatttgttctac
ctcaaacatttcgtccatgttctacagaccggcttagcagagcagaaattggctgtcagc
ttgttggtgactgttcttgaggcattccattttgaccatgagactctaagcaaagaaatc
aaggcagctaagcccaggaagacagaagagaccagtaatgtggaggaagatgctgagaag
gagccagcagaaaccattgacatggacagaagtgatgctgaggctgccatggaaaccgat
gatgcaggagcagccgtttccacagcaacagaagcaatggacactgaaatacaagactct
gccaaaccaaaagtccccacagagagccaggcaaagaaagcaccccctgttgtcagcagt
gggcttccaaagagtaaagaggatttagaagctcttatctcatccattcatcatacggtc
acccaaagtgtcctgcccaaactccaaaagtgtctcattgcaaaggttaaaagagatgat
gagcacaagatggtgaagtctaaggaggtgaaagatgaagaggtgctcagagtgcctatt
gcctttgccatggttcaactcatgaagtctctcccacaggaagtcatggaagccaattta
cctggtatccttctgaaagtgtgtgtccacctgaggagccgtttccaagagatccgtgat
gtcgctcgaaccactttggtgaagatcatagagacgcttggacataaatacctccattat
ctgcttaaagagatgcagggtgtcctagtgaagggttatcaggtccatgtgctgaccttc
actgtgtaccatttactctctgttctgaaaccatcattgaccggaggagatcttgacccc
tgcatggatatgcttatagcgatcttcaacaatgagctgtttggagctgttgctgaggag
aaggtgatcaaaggcatagtttctaaagtgatggaggcccgtcacagcaagagctcagac
tcgtacgagcttctagcccagttctgcagtcaggagcgagtggttcacctcatcctgcca
ttcaaagagatacttgagaacacagccagtttgaaggtctctaggcgagtgcatgctgtg
tttaggagaattgtggctggtcttctgctcaataagagcatgacccctcagtcaatcttg
ctgcttagccacggactcatcagtcaaagtctgcagctcattaccagcaagagcatagag
aagcctcttcctcctccagaccctcgactgcctcctccgagctgcttacttctgccgccc
attcctaagagaggcggagtgaaagctgccatcagcagcagaaccaatatgcacatccta
gtggaaacgggtcttagtttgcttcacggcagtctgaggagttcaaaggtcaactcatct
gtcgcatcaatacaggagatgttggatccattcgtatctctcctgctggactgtcttaac
tccatgcatgtgaaggtcattactgaagccttgcaggccttcatctggatcctgaagttc
ccactgcctgcagtggaacagaattttgagcagctgaccaaacaactctttgtcctgctg
aaggactacgccaaagcgggtgctgggcgcggcgaaaacttccacctcgttcagaactgc
ttcaaggccataactgttttggtgaagagtgtgacaaaacatatatcagaaacacagctg
caggtgctgctgggatatgcagaagaggacattcatgataactctcggcaagccactgcg
tttggccttcttagggcaattctctccagaaaactggtggtgccagaaatggaggatgtg
atgacaaaagtggctaagctcgccatcagcgggacaaacgaacaggttcgagtacgctgc
agacagatttacctgaagtacctgatggactatccactggggaagaaaatgaggaaacat
tttgactttatagtggctcagcttggttatgaatatgacactggcagacagtcttgtctt
gaaatgatggctttcattttccagacgttccctcagaaactcttgcatgaacactgcggt
ctgttctttgtgcctctgtcgctggacatgttgaacgatgattctgcatcttgtaagaaa
atggcagctctggccatcaagtctctgttgaatcggattgatttgcagcatcagaactcc
atgttcatcctcgtcaacaactggctgactggagagaagacgtctctgcggcgactggga
gctcaggtttgtgggctgtttgcggaggtagaaggggaaaagttcagccgacgaattgaa
gccctgatacctttcatagagaccgagatcaacgtttccaactttgaggatattgaggaa
gaggaggatgagaaggctgctgacagactgctgttctgttacctcacactcatcgtcaaa
ctcgtcaaagactgcagatttttagagctccaaaaacctaaagatctgctcaacaatatc
tggggccatatcgattcacatctgcggtaccctcactcatgggtgtggctgaccgcctct
cagatcttcggcctgctgttttctgctcataaaccagaggatctggtgaccttatggaat
tctcaggagaacacacagaaaaccacacagcgtgtggccactgatttcctctctcaaaac
cttgataagaagatgagagagctggttttatccttctgttaccaactacagtctaaatac
ctggatattgctgctggggagcaggtgataaagaacttgctctatgtagccaaggtgatc
taccacatctcgccagagtctgaaacagcaaacccaactgaagaacaggaagaggtgacg
ggtttggaggaagaaacgactgataacatggaagagaatgaaggggaagtggaagataag
gagcttcaagaggagaaagagcttgaagagcaagagaatgagaacaggcctccaactctc
ctctgggtgatgaagaagcttttattgctggctaaaagagaggcagctgtgacacctaaa
gtgcctttgaagagaacctgtgtttttaaattcttgggagccatagctgtggatcttggc
aaagatcgacttggaccttacctgaccaccattattgctcctctctacagagagctggac
agcacatatgcagaccaagaccccacattaaagaacctggctcaggagttgattgagttg
ttgaagaagctggtcggcttggaacgattctctctggcttttgccacagtgcagaaagaa
gccgtccagagacgaacctctcgcaagaaacaaaaggccatgcaggctgttgtcaatcct
gacattgctgctagaaagaaagtcaagaaacaactaaagaaaactgaagccaaaaagagg
aaatttgaatctgtgcgttcaggacataaagcaaagaaatcaaaacgcagctcactaagg
gatttggccatgatcaagtga
DBGET
integrated database retrieval system
