Myxocyprinus asiaticus (Chinese sucker): 127435160
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Entry
127435160 CDS
T08782
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03018
RNA degradation
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127435160
09123 Folding, sorting and degradation
03018 RNA degradation
127435160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127435160
03041 Spliceosome [BR:
masi03041
]
127435160
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127435160
mRNA degradation factors
5'-3' decay
Lsm complex
127435160
Spliceosome [BR:
masi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127435160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
127435160
NCBI-ProteinID:
XP_051544351
LinkDB
All DBs
Position
45:complement(23958283..23963500)
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AA seq
96 aa
AA seq
DB search
MSTALESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccgccctggagagttacattaaccggactgttgccatagtcacttccgatggt
agaatgattgtgggaacgctaaagggcttcgatcaaacaatcaatctcatcctggacgag
agccatgagcgtgtgtttagctcttcccagggtgttgaacaggtggttttgggactgtac
attgtcagaggcgataatgtggctgtaatcggcgaaatcgatgaagagacagattctgcg
ctagatctcggcaacataagggcagaaccactcaattctgtggtgcactga
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