Myxocyprinus asiaticus (Chinese sucker): 127435828
Help
Entry
127435828 CDS
T08782
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04620
Toll-like receptor signaling pathway
masi04621
NOD-like receptor signaling pathway
masi04622
RIG-I-like receptor signaling pathway
masi04623
Cytosolic DNA-sensing pathway
masi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127435828
04621 NOD-like receptor signaling pathway
127435828
04622 RIG-I-like receptor signaling pathway
127435828
04623 Cytosolic DNA-sensing pathway
127435828
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127435828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
masi03000
]
127435828
Transcription factors [BR:
masi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
127435828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
DUF4194
Motif
Other DBs
NCBI-GeneID:
127435828
NCBI-ProteinID:
XP_051545529
LinkDB
All DBs
Position
46:complement(25747116..25766907)
Genome browser
AA seq
428 aa
AA seq
DB search
MSAMQRGAICKPQFGPWLIEQVESGLYEGLHMIAASNDTFRIPWKHNARRDLGDEDIKIF
KEWAVVSGKINEHPNDKAKWKTNFRCALHSLKNFQIVHDNSRDPDDPHKIYRIIRPQNHQ
ETQSVEPIQQQPIFIDEIYSAKNYMSQEMEQDLLNQMDTMDLNQHSETQQWETYSQQNIQ
TTPTNYFDTLYSGVHCMQNNTPPLLQQPYTTVHAENLPSIYDLEISISYRRTEVLKTRLS
SSLVQFYYQCDPSELRGAPIRFPNTDSLIDLKQVQYTKRILESIQRGLQLEICQYGIYGF
RQDKCNVFVSTSDPNKIQNPEPKKLHQNFREQLLSFEKYIKDLKDFKENKCGSPDYTIYL
CFGEKLPDGKPLEKKLIVVKVVPLICRELHERAQMEGASSLLNDNVSLQISHNSLFDLIN
SLGLPSMD
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaatgcagaggggcgcaatctgcaaacctcagtttggaccgtggctcatagag
caggtggaaagtgggctgtatgagggattgcacatgatcgcagcatccaatgacacattt
cggatcccttggaaacacaacgcacgcagagacctcggggacgaggatattaaaatattt
aaggaatgggctgtggttagtggaaagatcaacgaacaccctaatgataaagcgaaatgg
aagacaaatttccgctgtgcacttcacagtctgaaaaacttccagattgtgcatgacaac
tcaagagatccagatgatcctcacaaaatctatcgcattatccgccctcaaaatcaccaa
gagactcagagtgtagaaccaattcaacagcagcccatattcattgatgagatctacagt
gcaaaaaattacatgtctcaagaaatggagcaggacttgctcaaccagatggatactatg
gatctaaatcaacattcagagacccaacaatgggaaacctactcccaacaaaacatacag
accactccaaccaactactttgacaccctctactccggtgtgcattgcatgcagaataac
acacctcctctactccagcaaccctacactacagtgcacgcagagaacctcccttccatc
tacgaccttgagatctcaatcagctacagaagaacggaagttttgaaaacccgcctgagt
tcatcactagttcagttttactaccagtgtgacccatctgagctaagaggagcacccatt
cgcttcccgaacactgatagtctaattgacctcaaacaagtccaatacactaaacgcatt
ctagaaagtatccagagaggtctgcaactggaaatatgccagtatggcatatatggcttc
cgtcaggataagtgcaacgtgtttgtcagcaccagcgatcccaacaagatccagaaccca
gagcccaaaaaactgcatcagaacttcagggagcaactcctgagctttgaaaagtatata
aaagatctaaaggatttcaaagagaacaaatgtgggtctccagattataccatctatctg
tgctttggggagaaactccctgatggaaagcctttggagaaaaaacttattgttgtcaaa
gttgtacctctgatatgccgtgaacttcacgaaagagctcaaatggagggagcgtcttct
cttctaaatgacaacgttagcttgcaaatctcccacaacagcctttttgaccttataaat
tctttgggtctgccttcaatggactaa
DBGET
integrated database retrieval system
