Myxocyprinus asiaticus (Chinese sucker): 127436064
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Entry
127436064 CDS
T08782
Name
(RefSeq) Bardet-Biedl syndrome 4 protein isoform X1
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
masi03036
]
127436064
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
masi03037
]
127436064
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
127436064
Cilium and associated proteins [BR:
masi03037
]
Primary cilia and associated proteins
BBSome
127436064
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_11
TPR_19
CFAP70_TPR_C
TPR_16
TPR_12
ANAPC3
TPR_14
TPR_17
TPR_CcmH_CycH
TPR_9
TPR_6
RMD1-3
TPR_Psidin_N
TPR_7
TPR_15
ARM_TT21_2nd
CFAP70_mid_TPR
TPR_INTS8_3
IFT56
ARM_TT21_4th
TPR_10
Wzy_C_2
NatA_aux_su
TPR_YpiA_C
ARM_TT21_N
ARM_TT21_C
TPR_20
HrpB1_HrpK
PknG_TPR
TTC22_C
TPR_MalT
SUCH1_C
CadC_C
CABIN1_N
TPR_FimV
Clathrin
Motif
Other DBs
NCBI-GeneID:
127436064
NCBI-ProteinID:
XP_051545950
LinkDB
All DBs
Position
46:3187875..3205830
Genome browser
AA seq
527 aa
AA seq
DB search
MADETIKTHVQLSVSTDLKKPRPKKAPELPILERRNWLIHLHYIHKDYETCKAIIKEQLH
ETQGMCEYAIYVQALIMRLEGKIQQSLELFQSCAIINPKSSDNLKQVARSLFLLGKHKAA
IEVYNEAARLNQKDWEISHNLGVCYIYTKDFKSAEDQLNLALKLNKHDLTFMMLGKMHLL
QGDTEKAIDVYKSAVEFSPENTELLTTLGLLYMQLGKYQKAFEHLGNALTYDPNNFKAIL
AAGSMMQTHGDYDVAMNKYRVAAYAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLS
PFDWKILYNLGLVHLTMQQYASAFHFLSAAINLRPRMSELYMLLAVALTNLDDADNACRS
YEQAVQLDELNPLVNLNFAVFLYNQGDKKAALLQYQEMERKVNAQVDNNSNTEFDPELIE
MAQKMGAALQAGENLYWSKPGRDGKSSQRSSSSKPSSSQQPLGTNQALGQAMSSAAGYGK
SMQITARPEADSTLSAPTDAPGDEDEVEEVAKPAKLEEKSKAKAAVE
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaaacgataaaaacgcatgtgcagctgtctgtgtccacagacctcaagaaa
ccccgtccaaagaaagctcctgaacttcccattttggagagaagaaactggcttatacat
ctgcattacatccacaaagattatgagacctgcaaggcgatcattaaagagcaactgcat
gaaactcaaggcatgtgtgaatatgccatttatgtgcaagctctgatcatgaggttagaa
gggaagatccagcagtctctggagttgtttcagagttgtgcgattatcaatcccaagagc
tcagacaacctcaagcaagtggcgcggtccctttttcttctagggaaacataaagctgct
atcgaggtttataatgaagccgcacgtctcaatcagaaggactgggaaatcagccataat
ctcggcgtttgctacatctacaccaaagacttcaagagtgcagaagaccagttgaatttg
gcactaaagctgaataaacatgatttgaccttcatgatgctgggaaaaatgcacttactg
cagggcgacacagagaaagccatcgacgtctacaagagtgctgtcgaattttcccctgag
aacacagagctgttgactacactcggcctgctctatatgcagctcggcaaatatcaaaaa
gcctttgaacacctcggaaacgctctgacatatgaccctaataactttaaggctatcctc
gcggccggcagcatgatgcagactcacggagattatgacgtggccatgaataaatatcgt
gtggcggcgtacgccgtccctgaaagccccccgctctggaataacatcggaatgtgcttc
ttcggcaaaaagaaatacgtggctgccatcagctgtcttaagcgtgcaaactatctctct
ccgttcgactggaagattctttataatctgggtttggttcatctgaccatgcagcagtat
gcatcggcttttcacttcctgagcgctgccatcaatctgcggccacgcatgagcgagctg
tacatgctactggcagttgccctgactaacctggatgacgcagataatgcctgcaggtct
tacgagcaggcggtacagctagacgagttaaacccgctagtgaatctgaactttgccgtg
ttcctatataatcagggtgataaaaaagccgcccttctccagtaccaggaaatggagagg
aaagtcaacgcccaggtggacaacaacagcaacactgagtttgacccagagctgattgaa
atggcgcagaagatgggtgccgctttgcaggcaggtgagaatctgtactggagtaaacca
ggcagagatggcaagagcagccagcggtcatcctccagcaaacccagtagctctcagcag
cctctgggcaccaatcaggccctgggtcaggccatgtcttcagctgcaggatacggcaag
agcatgcagataaccgcaagacccgaggcagacagcaccctctctgcccccacagatgct
cctggagatgaggacgaggtagaggaggtggccaaaccggccaaactcgaagagaagagc
aaagcaaaagcagcggttgaatag
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