Myxocyprinus asiaticus (Chinese sucker): 127436229
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Entry
127436229 CDS
T08782
Name
(RefSeq) contactin-1a-like isoform X1
KO
K06759
contactin 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127436229
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
masi04515
]
127436229
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
masi00537
]
127436229
Cell adhesion molecules [BR:
masi04515
]
Immunoglobulin superfamily
Contactins
127436229
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
masi00537
]
Others
127436229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_5
Ig_4
V-set_CD47
C2-set_2
DUF6262
Motif
Other DBs
NCBI-GeneID:
127436229
NCBI-ProteinID:
XP_051546220
LinkDB
All DBs
Position
46:432606..501923
Genome browser
AA seq
1041 aa
AA seq
DB search
MMTAALQHRVMRPVTSLLLAVSITLSSNVWSVCGEFQGVFGDESAGYGPVFEDQPVDTIY
PEESPEEKITMSCRARANPPATYRWKLNSTDILIRDGSDDHYRLMGGNLVISDPDRSKHS
GNYTCEATNEFGTVISQRASVQFGYLDMFSTDEREAVYVKEGQGAVLLCAPPPHFPEDLS
FRWMLNEFPEFIPMDKRRFVSQATGNLYISTVRASDSGNYSCFVSSPSIAKSVFSKFIPL
VPITERSLRKYPADIKVKSPDTHTLIGQNITLECFALGNPIPQIRWRKVDGELPVNRHDI
SMAGSLLHLYDVQYEDEGLYECEADNSKGKDWHKLHLIVEGAPEWIEKITSSERDINSDY
IMSCLASGKPKPHVHFLKNGRTFSMNHEIRLNQLSFDDSGMYQCFAENRHGVIYTSAELR
VFAGAPSFEFNPVKPKILVAKNGRVVMECKPRAAPRPNISWSKGTELLHNSSRMFIWPDG
SLEIVNVTKSDEGKYTCFAENDRGRANGTGSLSVTDATKITLAPSNRDVSVGESTTMECA
ASHDPTLDLTFIWSLNAHVLDLDRDREYYEHKMDINQDGQMGTSSCELLIRNTQLKHAGR
YTCTAQTPVDNITTSAELVVRGPPGPPGGVRVDDVLNSSVRVTWSHGTDNLSPISTYTIQ
YRDTRTQDDWRDAKTSPVIVEGNSEMATVVNLTPWTEYEFRVIATNTLGTGPPSDPSPKT
TTKQAKPVVAPSDISGGGGTSRELTITWTPVQPQYYYGSNFGYIIAFRPHNEHEWLKVTV
ADPQAQKYVHKDSNIPPATKFEVKMKAFNSQGEGPYSVSAFIYSAQDVLSDAPTIVEART
LSATEAIVWWIPVQSQTVEGYQVRYWCSSTENEASAQRVLVSGRENHTRLENMKPDSHYL
IEVRAYNGAGYGPAGQRHEIYTKKPPPNRPPKIIGTKMHSSGTSINIAWEHVRSMSNESA
VVGYKVLYRREGQSNAVLYTTVKQSIDVPIKKGEYLVEVRAHSEGGDGAVAQVRITGGGV
LMVQSLSIVSLLITLMFSFIL
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgatgacagcggcgcttcaacacagagttatgcggcccgtcacatcactgctgctcgcc
gtctcaatcacgctctcatctaacgtgtggtcagtgtgtggtgaatttcaaggagttttt
ggagatgagtctgcaggttacgggcctgtgtttgaagatcagcctgttgacaccatctat
cctgaagaatcacctgaggagaaaatcaccatgagctgcagagcacgagcaaatccaccc
gccacatacagatggaaattaaacagcacagatattttgattcgtgacggcagtgacgat
cattatagactgatggggggaaacctcgtcatcagtgaccccgacaggagcaagcattct
gggaattatacctgcgaggcgaccaatgagttcggcacggtgatcagtcagagagcttca
gttcagttcggatatttggacatgttctccacagatgagcgagaggcggtgtatgtgaag
gaggggcagggggcggtgctactgtgtgctccgcccccacacttcccagaagatctgtcc
ttccgttggatgctcaatgagtttccagaattcattcctatggataaacggcgtttcgtg
tctcaggccaccggaaacctctacatctccaccgtcagagcgtcagacagcggaaactac
tcgtgtttcgtgtcgagtccgtccatcgccaagagcgtcttcagtaaattcatcccgctg
gtgcccatcactgaacgttctctgcgcaaatatcccgctgatattaaagtgaaatctcca
gacacacacacactcatcggacagaacatcacgctcgagtgtttcgctctgggaaatccg
atccctcagatccgctggaggaaggtggatggtgaacttcctgttaatcgtcatgacatc
agtatggcaggaagtctccttcatctgtatgacgttcagtatgaagacgagggtttgtac
gagtgtgaagctgataactccaaaggaaaagactggcacaaacttcatctcatcgtagag
ggagctcctgaatggattgagaagatcacgagttcagagagagatatcaatagtgattac
atcatgtcctgtctcgccagcggcaaacccaaaccacacgttcacttcctgaagaacgga
cgaacgttctccatgaatcatgagattcgtttgaatcagctgtcgtttgatgattcaggg
atgtatcagtgtttcgctgagaaccgtcatggggtgatttacaccagcgctgaactccga
gtgttcgctggtgctccttcatttgagttcaaccccgtgaagcccaaaatactagttgct
aaaaacgggcgagtggtgatggagtgtaaaccccgagcggcgccgcgtccgaacatctcc
tggagtaaaggaactgaactgctgcataactccagcaggatgttcatttggccggatggg
agtttagagattgtaaacgtcactaaatcagatgaaggcaaatacacgtgtttcgctgag
aacgacagaggacgagcaaacggcaccggatcactgtcagtcacagatgccacaaagatc
actctcgctccatctaaccgtgatgtcagtgtcggggagagtaccacaatggagtgtgct
gcatcacatgacccgacccttgacctcaccttcatctggtcactcaacgctcacgtcctc
gacctcgacagagacagagaatattacgaacacaaaatggatataaatcaggacggtcag
atggggacgtcaagctgtgagctgttgatcagaaacacacagttgaagcatgcgggtcga
tacacctgtacagcacagacacctgtagacaacatcaccacatctgctgaactggtggtc
agaggacccccaggtcctcccggaggagtgcgtgtggatgacgtgttgaacagcagtgtg
agagtcacatggagtcacgggacagataatcttagtccgatctcaacatacactatacag
tacagagacaccagaacacaagatgactggagagacgccaaaacctctccagtgattgtg
gagggaaattcagaaatggcgacggtggtgaatctcacaccgtggactgaatatgagttt
cgggtcattgccacaaacactcttgggacaggaccgcccagtgacccgtcacccaaaacc
accacaaaacaagccaagcctgtggtggccccgtcagacatcagtggaggaggaggaacc
agcagagaactcaccatcacatggacgcccgtccagccgcagtattattacggcagtaac
ttcggttacatcatcgcgttcagacctcataatgagcacgagtggctgaaggtgacggtc
gctgatcctcaggcacagaaatacgtccacaaagactcaaacatcccaccggccactaag
tttgaggtgaagatgaaagcgtttaatagtcagggtgaaggaccgtacagcgtcagcgcc
tttatttactctgcacaggacgttctgtcagacgcgcccacaatcgtggaggcgagaaca
ctgtcagcgactgaagcaatcgtgtggtggatccctgttcagtcacagactgttgaagga
tatcaggtgcgttactggtgtagttccacagagaacgaggcgtctgctcagcgtgttctt
gtgtccggtcgagagaatcacacgcgtctggagaacatgaaacctgattcacattatctc
atcgaggtgcgtgcgtacaatggtgctggatacggtcccgccggccaacgacacgaaatc
tacaccaagaaacctcctcctaaccgaccgcccaaaataatcggcacgaagatgcactcg
agtgggacgtcaatcaatatcgcgtgggagcacgtcagatcgatgtccaatgagtctgct
gttgtgggttacaaggtgctgtacagacgtgaaggtcaaagtaatgctgtactgtacacc
acagtgaaacagtccatcgatgtgcccataaagaagggggaatatctggtggaggtgcgt
gctcacagtgagggaggagacggagccgtcgcacaagtgcgcatcacaggtggtggcgtg
ctgatggttcagtctctcagtatcgtctcgctgctcatcacgctgatgttcagtttcatt
ctctga
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integrated database retrieval system
