Myxocyprinus asiaticus (Chinese sucker): 127436459
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Entry
127436459 CDS
T08782
Name
(RefSeq) DNA mismatch repair protein Msh3-like isoform X1
KO
K08736
DNA mismatch repair protein MSH3
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
127436459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masi03400
]
127436459
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
127436459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Mo-nitro_C
Motif
Other DBs
NCBI-GeneID:
127436459
NCBI-ProteinID:
XP_051546592
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All DBs
Position
4:complement(22295444..22390814)
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AA seq
1100 aa
AA seq
DB search
MYANARNVSTSKSSKKSSSQTTISRFFSSARDKSQPTDQPRINCQDRRHKGRGKKRLSDG
GVSSEKRPKLSHDVEDERVEECTVTPNTLGKMVSNRASVSHATLSRLKNFSCPAVPESRV
SDRGTKTEVEPSDLGKADSSVIEHHNTIMKNTLSESVEEVKEEPVQIKQEFSFSQFTKNT
AITKSSPESAVPSRRRKTIYTPLEEQYMEIKKRHMDTVLCVECGYKYRFFGEDAEIAAKE
LNITCHMDHNFMTASIPTHRLFVHVRRLVSQGYKVGVVKQTETSAIKASSTNKSSLFTRQ
LSALYTKSTLVGEDVNPLLKLGDLEQAEDVVQDSGNNNYLMCVSKSFDKQSKEMTIGMVV
VQPSIGDIMVDCFKDNMSHSELESRVLRIQPVEILVSSDLSETTERLLRNIALSSVQADD
RIRIEKRESALFEYPTAMRIIKDFYKDTTHSTLGNHEKGSYSLCMDLESPIICCLGPVIE
YLTEFKLEKILLCSSSFRRLSSDADHMMLNATTMKNLEILCNQTTGSVKGSLLWVLDHTQ
TPFGKRLLRKWVCQPLKSVTEIWARQEAVAEILLSESSVLPSLQSLLTRLPDLERGLCSI
YHKKCSTQEFYLIACTLSRLSAELQALMPAIQSQLSSALLKNILLDTPRLLSPAHNFLNV
LDENAAKTGNKTELFVDLTDFPVIRRRKDEIQSVLLDIMEHLRDVRLILKKPSLDYTTVS
GQQFLIEVKNSMSSIVPADWVTINSTKVVGRYHTPFIVEKHQHLQQLQEQLVIDCSHEWI
NFLQLFGDHYYILKKAVCHLATMDCLFSLAQVAKENNYCRPKVLEEQCQILITGGKHPVI
TSLMGDQDQYVPNDTHLQGDGKRAMIITGPNMGGKSSYIRQVALVTIMAQLGSFVPAREV
SVGIVDGIYIRMGASDNISRGRSTFMEELVEASDILARATSRSLVILDELGRGTSTHDGI
AIAYATLESFIRDVKCLTLFVTHYPPLCELEQLYPQHVRNYHMAFLLNEPESTSDEEEVH
PEFITFLYQLTEGAAARSYGLNVARLAEIPESILRTAALKSKELEALVNSRREMVRVLSD
AWNITNKETLLDWRQCSPQI
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaaatgccagaaatgtatccacatccaaatcctccaagaagtccagcagtcag
acaaccatcagccgattcttctcaagtgcacgcgataaatctcaaccaactgatcagccc
aggattaactgccaggaccgacgccataagggcagaggaaagaagaggttgtctgatgga
ggagtgtcctctgaaaagagacccaaactgtcacacgatgtggaggacgagagagttgaa
gaatgcactgtgactccaaacaccttaggtaagatggtatctaatagagccagtgtcagc
catgccaccctgtcgaggcttaaaaatttcagctgcccagcggtcccggagagcagagtt
tcagatcggggtacaaagacagaggtcgagccatcagacttgggaaaagctgacagttct
gtcatagaacaccacaacacaataatgaagaacaccctgtctgaatcagtggaagaggtc
aaagaagagcctgttcagattaaacaggagttttccttcagtcagtttactaagaatact
gcgatcacaaagagttccccagagtctgctgttcccagcaggagaaggaagaccatatac
actcccctagaggaacagtacatggaaatcaaaaagcgacatatggacacagtgctttgc
gttgagtgtggctacaagtacaggttctttggtgaggatgcagagattgcagcaaaggaa
ctcaatatcacttgtcatatggaccataacttcatgactgccagcatccccactcatcgc
ttgtttgtgcatgttcggcgactggtttctcagggatataaggtaggtgttgtgaagcag
acagagacttcagccatcaaggcctccagcactaacaagagttctcttttcacacggcaa
ctaagtgcactttacaccaaatccacacttgtaggcgaagatgtgaatcctcttctgaag
ttgggagatttggagcaggctgaagatgtggtgcaagacagtggcaacaacaactatcta
atgtgtgtgagcaagagttttgataaacagagcaaggagatgaccataggcatggtggtg
gtccagccaagcataggagacataatggtggactgttttaaagataatatgtcccattca
gagttggagtccagggtgctgagaatccaacctgtagagatcctggtgtcttcagacctc
tccgagacgactgagaggttgttacgcaatattgctctgtccagtgtccaagcagatgac
cgaattcgcattgagaaacgtgaaagtgctctctttgaatacccgactgcaatgagaatt
atcaaagacttctacaaagacactactcattcaacactgggaaaccatgaaaagggttcc
tactccctctgtatggacctggagagcccgattatctgctgtcttggtcccgtgattgag
tatctgactgagtttaagttggagaagattttgctgtgttccagctcattcagaagactt
tcgagtgatgcagaccatatgatgctcaatgctactaccatgaagaacctggagatcctg
tgtaaccagacgacaggttctgtgaagggaagtttgctctgggttctggaccacactcag
actccatttgggaagagactgttaagaaaatgggtgtgccagcccctgaagtctgtcact
gagatctgggctcgtcaggaggcagtggctgaaattttgctttccgagtccagcgttctt
ccctctctccagtctttgttaactcggttgccagatctcgagagaggactttgcagtatc
taccataaaaagtgttctactcaggaattttacctcattgcctgcacactctctcgcctg
agtgctgagcttcaagccctcatgcctgccatccagtcacagctcagctctgcccttcta
aagaacatcctgctcgacacaccccggcttttaagccccgcccacaactttctgaatgtt
cttgatgagaacgctgcaaagaccggtaataagacagagttgtttgtggatctaactgac
ttcccagtgattcggaggagaaaagatgagatccagagtgttctattggacataatggag
catctgcgagatgtacgcctgatcttaaaaaaaccatcgttggactacacaactgtgtct
ggccaacagtttctcattgaagtgaagaacagcatgtcatccattgtcccggcagactgg
gtcacaatcaacagcactaaggttgtgggacgctatcacactccattcattgtggagaaa
catcagcacttgcagcagcttcaagagcagcttgttattgactgcagtcacgagtggatc
aacttccttcagctatttggggaccattactacatcctgaagaaagcagtgtgtcaccta
gcaaccatggactgcctcttctcattggcccaggttgctaaagaaaataattactgcaga
cccaaggttctggaggagcagtgtcagatattgattacgggaggcaagcatccagtcatc
acctcactgatgggagatcaggaccagtacgtgcccaatgacactcacttacagggagat
gggaagcgagccatgatcatcactgggccaaacatgggcggcaagagctcttacattcga
caagttgccctggtgaccatcatggcacagctgggatcctttgttcctgccagagaggtg
tcagtgggcattgtagacggtatatacatcaggatgggagcatctgacaacatctcaagg
ggcaggagcacctttatggaggagcttgtggaagcgtcagatattctggcacgtgccacc
tcccgttcactggtcatcctggatgaactgggtcgaggcaccagcacacatgacggcatt
gccattgcctatgctaccctggagtccttcatcagagacgtgaagtgtctgacattgttt
gtgacccactaccctccgttatgtgagctggagcagctgtacccgcagcatgtgaggaac
tatcacatggctttcctgctcaatgagccagagagcacttctgatgaggaggaggtgcac
ccagagttcatcacatttctctatcagctgactgaaggcgcagcggccaggagttacggg
ctaaatgtagcacgtctggcggaaatcccggagtcaatactcaggaccgctgctctcaaa
tccaaagagttggaagctctcgtgaacagccggagggaaatggtgagagtgttatctgat
gcctggaatatcaccaacaaggaaacattactggattggagacagtgtagtccccagata
tag
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