Myxocyprinus asiaticus (Chinese sucker): 127436907
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Entry
127436907 CDS
T08782
Name
(RefSeq) contactin 1b
KO
K06759
contactin 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127436907
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
masi04515
]
127436907
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
masi00537
]
127436907
Cell adhesion molecules [BR:
masi04515
]
Immunoglobulin superfamily
Contactins
127436907
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
masi00537
]
Others
127436907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3-III_PB4
Motif
Other DBs
NCBI-GeneID:
127436907
NCBI-ProteinID:
XP_051547380
LinkDB
All DBs
Position
47:12897241..12922108
Genome browser
AA seq
1029 aa
AA seq
DB search
MATPAMFLYILSSLFLSAAAIKPRIFEPRIFDKEATGFGPIFEEEPLDTVYAEDSPENKI
SMNCRVRANPPAIIKWWLNNWEIKLMEQPDEHFSLVGGNLVITNPDKDKHAGKYVCVAKN
VYGTVISKEATVKFGYLNQFPTDEREPVNVKEGQGVVLLCSPPSRYPSEVMFRWIYNDFP
NFIIPDQRRFVSQSTGNLYIAKVEASDVGNYSCFVSSSTIGKSVFSMPIPLIPQIEKEVK
RYPADIRVKFPKTYALVAQNITLECFALGNPLPHIRWRKLDADLPPSYEVSMNGALLHLI
NVQYEDEGSYECETLNVKGMDWYRQWLYVEGAPEWAEHINDTEKDVGSELTLRCVAVGKP
LPWIRWLKDGYSYGKGELKFSSLTFEDSGMYQCVAENEWGTIYASAELRVVSCAPTFIYN
PVKKVLLGAENGRVVIECQPRAAPKPKFIWKRGTELLTNSSRIFIWDDGSLEILNATKSD
EGSYTCYAENDRGKANSTGTLTITEATKITVAPSDTQVVVGDRTVLQCSASHDPSLDITF
IWTVDSYVINFYTDWEHYEQLMGHENSGDLLIKNIQIRHGGRYTCTAQTIVDNATAEADV
FVKGLPGPPGGVRVEEIGDTTVKVRWSLGSDHGSPLIQHVIQTRDFYALDPEDWKTASTS
PVFLDGSTESATVLDLFPWMQYEFRVYAINDFGAGESSRPSIKIKTWDARPTVAPSDVIG
QVGISGELIVTWSPVKPQYFFGKKFGYVVAFKQHEDYEWKWVTVEDPETRRYVYKESMNP
DTEIQVKVSTYNNKGEGPSSLITVVYSPRLAPTEAPLDVYARQVTSTEALVWWLPVYQAP
PNWVDGYQIRYWRKYDDNEAAACRVLVHRTVNQTRLENMRPDSHYLIEVRAFNGAGLGPP
SEHCEMFTRRPPPSRHLRVYKYVSFTRKWLYLYWDHIYNYWNESYVEGYKILFRKEGERY
GKLYTTGRHYIDFPMPETGDYIIEVRARCEGGDGPISQIRVQGKAAVYARSLSLASLLLL
TLGWMNLGL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccccagccatgtttctttatatcctctcctccctctttttatcagctgctgca
attaagcctaggatcttcgaaccaagaatctttgacaaggaggccacaggttttgggccc
atatttgaagaggagcctctggacacagtttacgcagaagattctccagagaacaaaatc
tccatgaactgcagggtgcgggccaacccaccggccattatcaaatggtggttgaacaat
tgggaaattaaactgatggagcagcctgacgagcactttagcctggtcggtggaaacctg
gtcattaccaacccagacaaggacaagcatgctgggaaatatgtgtgtgtggccaagaat
gtgtatggcactgtcattagcaaggaagccaccgtcaagttcggatacctgaatcagttc
cccacagatgagagagagccagtgaacgtgaaggaggggcagggggtggtgctgctgtgt
tctcctccatctcgctatcctagtgaggtgatgttccgctggatctacaatgatttcccc
aacttcatcatccccgaccagaggcgtttcgtgtcccagtccactgggaatctgtacatc
gctaaagtcgaggcctctgatgttgggaattactcttgttttgtgtcaagctccaccatc
ggcaagagcgtttttagcatgccgatacctctgattccacaaatagagaaggaggtaaag
agatatcctgccgatatccgtgttaaatttcccaagacctatgctttggtggcacagaac
atcactctggaatgctttgcccttggaaatccactaccacatatccgctggaggaagtta
gatgctgatcttccacccagctatgaggtcagcatgaatggagctttgctgcacctgatt
aatgtgcaatatgaggacgagggcagctacgaatgtgagacgctcaacgttaagggaatg
gactggtatcggcagtggctctatgtagaaggtgctccagaatgggcagagcacattaat
gacacagagaaagatgttggcagtgagctaacgctgagatgcgttgctgtggggaagccg
ttaccatggatacgctggctgaaggatggctactcatatggtaaaggggagctgaagttc
tccagtctcacatttgaggattctggcatgtatcagtgtgttgcggagaacgaatggggc
accatctatgccagcgcagagctacgggttgtctcctgtgcgccaacattcatttataat
ccagtgaagaaggttctgctaggggctgaaaatggacgtgtggtgatagaatgccaacct
cgtgctgctcctaaacccaagtttatctggaaacgaggcactgaactgctgaccaactct
tcacgaatattcatctgggatgatggtagtctggaaattctaaatgcaacaaaaagtgac
gagggctcgtacacctgctatgctgagaatgaccgtggcaaagccaacagcacgggcacc
ctcactatcactgaggccaccaagatcacagtagcaccatcagacactcaggtggttgta
ggtgacaggacagttctccagtgctctgcgtcccatgaccccagtctggacatcaccttc
atctggactgttgactcctacgtgatcaacttctacacagactgggagcactacgagcag
ctcatgggtcatgagaacagtggagacctgcttatcaagaatattcagatcagacatggg
ggacgctatacctgcacagcacagaccatagtggacaacgccaccgcagaagctgatgtt
tttgtcaaaggtttgcctggtcctcctggtggcgtccgcgtggaagagattggagacaca
acggtaaaggtgcgctggagtctgggatcagatcatggaagtccccttattcaacacgtc
atacagacacgagacttctacgccctggacccagaggactggaaaactgcatccacctct
cctgtgtttttggatgggtcaacagagtctgccactgtgcttgacctcttcccctggatg
caatatgaattccgagtgtatgctatcaatgactttggagctggggaaagcagccgtccc
tccattaaaatcaagacatgggatgccaggcctacagtagctccttctgatgtcattgga
caagtaggaataagtggagagctaatcgttacctggagtcctgtgaaacctcagtacttc
tttggtaaaaaatttggctatgttgtggcgtttaagcagcatgaggattatgagtggaaa
tgggtgactgtggaagatcctgagactagacggtatgtctacaaagagagtatgaaccca
gacactgagattcaggtgaaagtgagcacctacaacaacaaaggagaaggaccttccagt
cttatcacagtggtctactccccaagacttgcacccactgaagctcctttagatgtgtat
gccaggcaagtcacctcgacagaagctttggtctggtggctaccagtctaccaggcacct
ccaaactgggtcgatggataccagattcgttactggaggaagtacgatgataatgaggct
gctgcctgccgagtcctggtgcatagaacggttaaccaaacccgtctggagaatatgcgg
cctgactctcactacctcatagaggtacgagcattcaacggtgccggactcggaccgccc
agcgagcactgtgagatgttcaccaggagaccacccccaagtcgtcatttgagagtatac
aaatacgtcagttttacgcgcaaatggctgtatttgtactgggatcacatttataactac
tggaatgagtcctatgtggagggatataagattttgttccggaaggaaggagagcgttat
gggaagctttacaccacaggtagacactacatagacttccccatgccagagaccggagat
tacatcattgaggtccgagcacgttgtgagggaggcgatggacccatatcacagatcaga
gttcaaggtaaagcagctgtttatgccagatctctcagcttggcctctctccttctgctg
actctgggctggatgaatctaggcctgtag
DBGET
integrated database retrieval system