Myxocyprinus asiaticus (Chinese sucker): 127436912
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Entry
127436912 CDS
T08782
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
masi04121
]
127436912
Enzymes [BR:
masi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127436912
Ubiquitin system [BR:
masi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
127436912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
127436912
NCBI-ProteinID:
XP_051547392
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All DBs
Position
47:12976442..13036006
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AA seq
796 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGRDFSKSGHEGTEAMRKDPIVVQVLRRGPSSQNQS
NLQEVCLVDVCTQTDITFEHIMALAKMRPTTPPVPDICPFLLSDSCHSIQTMEHEYFDCP
EYVSSTQAEVDKADEFECEEVELCRMNTQEKLGLTLCYRTDDKEDAAIFIGQVEPNSIAA
RDGRIREGDRILQINGHDVQDREEAVALLSNENSRSIVFLVTRSEGQMDGIWLDEDHHDF
LEELKMEILEEQKKDGLLQTAGCIKRSKRREESSTTTDTTTCSSSVLGKDSGVKCSFEES
SEHEPLHHTQTRTQKHLRDRWEVSSHLVPMDTISLARQELGQDSRVSENGLDSFQQLLEL
KCQIRNGGECGLVYRRSSTIECSLTEQGGGGVARELHMLNEELRSIERECQSIMQAHQLR
RSKHDSPRTDIESRLHRGKLADINEHPERLQSEKMKDKDSSSAYNTAESSRSTPLGTEGS
PDHSLQRRIHLTNQRNLQSIQHTQSLYSSPILSLPSHSSPTCSRAHTYTSSTPPLQTPIT
SPGSQGPSQAFSSSLEQSPSNPSESDPALPADDERCERERNRSKFETTCHHPSPYHNNTT
ATQPPSTRHYQSYLQLLQQHSSSSLEYSQSQLSLLSLRGRPGPSQPGRLEWKVKVRADGT
RYIARRPARDRILRERALRICEERSGGMTTDDDAVSELKMGRYWSKEERKQQLARAREQR
RRREFMQKSRLECLRETMGTASGEVSILELSHKKMLKKRNKKILDNWMTIQELMSHGARE
PEGTKVHNAFLSVTTV
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgggctgtaacctgtgcacgctgcagaagagagaggaacattataagctgctgtacgag
attgcacaggtgaatgggcgtgacttttcaaagtctggacatgaggggacggaagcaatg
cggaaagatcccattgtggtgcaggtgttgaggcggggcccctcatcccaaaaccagagc
aacttacaggaagtgtgtttggtggacgtgtgtactcaaacggacataacttttgaacac
atcatggctctggctaagatgagacccactaccccacctgtgccagacatatgccccttc
ctactgtcagacagctgtcattccattcagacaatggagcatgaatattttgattgtcca
gagtatgtatccagcactcaggcagaggtggacaaggctgatgaattcgagtgtgaggag
gttgagctctgtcgaatgaacactcaggaaaagctgggtctgactctctgttaccgcact
gatgataaggaggatgcagccatttttattggccaggtcgagcccaacagcatagctgca
agggacggacggatcagagagggagatcgaattttacagataaatggtcatgatgtgcag
gacagggaagaggctgtcgctctcctttcaaatgaaaattccagatccattgtgtttctc
gtcaccagatctgaaggacagatggatggaatctggcttgatgaagaccatcatgatttc
ctagaggagctgaagatggagattttagaggaacagaaaaaagatggccttcttcaaaca
gcaggttgcataaagcggtccaaaagacgtgaggaaagctcaacaaccacagatacaaca
acatgttcatctagcgttctagggaaggacagtggagtgaaatgcagctttgaagaaagc
tctgaacatgaaccactccatcacacccaaacacggactcaaaaacatcttcgggacagg
tgggaggtgagctcacatttggttcctatggacaccatcagcttagccaggcaggaactg
ggtcaagacagcagagtgtctgagaatgggttagacagcttccagcaactcctagagctc
aagtgccaaatccgtaatggcggagagtgcggattggtgtacaggcgaagcagcactatc
gaatgtagcctgacggagcagggcggaggcggtgtagcacgggaactgcacatgctcaat
gaggaactacgtagcatcgaacgcgagtgccagagcatcatgcaggcacaccagctgcgc
agaagcaagcatgactcacctcgaacagatatagaaagtcgattgcaccgtggtaagctt
gcggatattaacgaacatcctgaaagactacaaagtgagaaaatgaaagataaagacagc
tctagtgcctataacacggccgaaagctcccgctcaacaccactgggaacagaaggatcg
cctgaccactcgctacagcgtcgcatccacctgaccaatcagaggaaccttcaaagcatc
caacatacacagagtctgtacagtagtcccatcttgtcattacccagccatagtagccca
acttgcagtcgtgcccatacctacaccagctccacaccccccttgcagactcccattacc
agtcctggttcacaaggccccagccaagccttttccagcagcctcgagcaaagccctagc
aacccttcagagtctgacccagcccttcctgcggatgatgagcgctgtgaaagagaaagg
aaccgtagcaaatttgaaaccacttgccaccacccttcaccctaccacaacaacaccaca
gcgacccaacctcccagcacacgccactatcagagctacctacaacttctacaacaacat
tcctcttcttctctggaatactcccagagccagctcagcctccttagtctccgtggccgg
cccggtccttcgcaacctggacgacttgaatggaaggttaaagtacgggcagacggaacc
aggtacatagcacggcgtcctgcacgagaccgtatcctacgggaacgagccctacggatc
tgtgaggaacgtagtggtggcatgaccacagatgacgacgcagttagtgagctgaagatg
ggccggtactggagtaaagaagagcggaagcagcagctagcaagggcaagagagcagcgg
cgcaggagggagttcatgcaaaagagcagactggagtgcctcagggagacgatggggaca
gcgagtggggaggtaagcatcctggagctcagccataagaagatgctgaaaaaacgaaac
aagaagatcctggacaattggatgactattcaagagctaatgagccacggtgctcgagaa
ccagagggcactaaagtccacaatgccttcctctcagtcacaaccgtttag
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