Myxocyprinus asiaticus (Chinese sucker): 127437063
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Entry
127437063 CDS
T08782
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127437063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
masi03041
]
127437063
Spliceosome [BR:
masi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
127437063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
PRP4
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
WD40_like
Ge1_WD40
Beta-prop_SCAP
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
127437063
NCBI-ProteinID:
XP_051547680
LinkDB
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Position
4:14162598..14170338
Genome browser
AA seq
253 aa
AA seq
DB search
MEMEERVSERQAEVLAEFECRKRTRQITVSTDDAEVKACLRALGEPTTLFGEGPAERREC
KWEESDGNMASCAADGSVKLWSLDSDEPVADIEGHSMRVAQVTWHPSGRFLGTTCHDNSW
RLWDLEVQEEILHQEGHSKGAHDLHFHPDGSLAGTGGLDAFAHVWDLRMGCCVMFLEGHL
KEIYSINFSPNGFHVATSSGDNTCKVWDLRQRCINTIPTHQNLVSSVKFQRRCSSLEEFE
ANLTMFVIGQPSK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggagatggaggagcgtgtgagtgagcgacaggctgaagttttggcagagtttgagtgc
agaaagagaaccagacaaatcaccgtctccactgatgatgctgaggtgaaggcctgcctc
cgagctcttggagagccaaccacgctgtttggggaggggcctgctgagagacgggagtgc
aaatgggaagagtcagatggcaatatggcctcctgtgctgcagatggatctgttaagctg
tggagtttagacagtgatgagccagtagcagacattgaagggcactccatgagggtggct
caggtcacctggcacccatcgggccggtttttgggcacaacttgccatgataattcatgg
cgactttgggatcttgaggtccaagaagagattctgcatcaggagggtcacagtaaaggc
gcacatgacctgcacttccatccagatggctcgcttgcaggaactggtggtctggatgcg
tttgctcatgtctgggacctgcggatgggttgttgtgtcatgttcctggagggccatctg
aaagagatttacagcattaacttctcaccaaacggctttcatgtggcaacaagcagtgga
gataacacttgtaaagtgtgggacctgcggcagaggtgtataaacacaatccccacccat
cagaacctggtgtcttctgttaagtttcagcgtaggtgttcaagtctagaggagtttgag
gctaatttaacaatgtttgttataggtcaaccgtccaagtga
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