Myxocyprinus asiaticus (Chinese sucker): 127437578
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Entry
127437578 CDS
T08782
Name
(RefSeq) interferon regulatory factor 3-like isoform X1
KO
K09447
interferon regulatory factor 7
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04620
Toll-like receptor signaling pathway
masi04621
NOD-like receptor signaling pathway
masi04622
RIG-I-like receptor signaling pathway
masi04623
Cytosolic DNA-sensing pathway
masi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127437578
04621 NOD-like receptor signaling pathway
127437578
04622 RIG-I-like receptor signaling pathway
127437578
04623 Cytosolic DNA-sensing pathway
127437578
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127437578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
masi03000
]
127437578
Transcription factors [BR:
masi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
127437578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
127437578
NCBI-ProteinID:
XP_051548548
LinkDB
All DBs
Position
48:5709600..5722032
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AA seq
423 aa
AA seq
DB search
MSAMQSSSFCKPQFGLWLIEQVESGLYEGLRMIPGSTDTFRIPWKHNACRNLGEEDIKIF
KEWAVVSGKINEHPNDKAKWKTNFRCALYSLKNFQMLHDNSKDKDDPHKIYRIIRPQNHQ
ETQHQPTFIAEIYKPANNYTSPELEQDLLNQMDTVDLNQLSETQQWETCSHQNIQTTPSN
YFDISDSGVHCMQNSTPPPVQQPYTTVHAENPLSIHDLEISISYRKTEVLKTRLCSPLVQ
FYYQCDPSELRGATIRFPNTEGLIDYKQVQYTKCILDSIQRGLQLEICQNGIYGFRQDNC
NVFVSTCGPSEIQNPEPRKLRQNFKEELLSFEKYIKDLKDFQENKRGSPDYTIYLCFGQK
LPDGKPLEKKLIVVKVVPLICRELHERAQMEGASSLLNDNVSLQISHNSLFDLINSLGLP
SMD
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaatgcagagcagctcattctgcaaacctcaatttggcctgtggctcatagag
caggtggaaagtgggctatatgagggattgcgcatgatccccggatccactgacacattt
cggatcccttggaaacacaacgcctgcagaaacctcggggaagaggatattaaaatattt
aaggaatgggctgtggttagtggaaagatcaatgaacaccctaacgacaaagcaaaatgg
aagacaaattttcgttgtgcactttacagtctgaaaaactttcagatgttgcatgataac
tcaaaagataaggatgatcctcacaaaatctatcgcattatccgtcctcagaatcaccaa
gagactcaacatcaacccacattcattgctgagatctacaaacctgcaaataattacaca
tctccagaattggagcaggacttgctcaaccagatggatactgtcgatctaaatcaactt
tcagagacccaacaatgggagacctgttcccatcaaaacatacagaccactccatccaac
tactttgacatctctgactccggtgtgcattgcatgcagaatagcacaccgcctccagtc
cagcagccctacactacagtgcacgcagagaaccccctttccatccatgaccttgagatc
tcaatcagctacagaaaaacagaagttctgaaaacccgcctgtgttcaccactggttcag
ttttactaccagtgtgacccatctgagcttagaggggcaaccatacgctttccgaacact
gagggtctaatcgactacaaacaagtccagtacactaaatgcatcctagatagtatccaa
agaggtctgcagctggaaatatgccaaaatggcatatacggcttccggcaggacaattgt
aacgtgtttgtcagcacctgcggcccctctgagatccagaacccagagcccagaaaactg
cgtcagaacttcaaggaggaactgctgagctttgaaaagtacataaaagatctaaaggat
ttccaagagaacaaacgtgggtctccagattataccatctacctgtgctttggacagaaa
ctcccagatggaaagcctttggagaaaaaactcatagttgtcaaagttgtacctctgata
tgccgtgaacttcatgaaagagctcaaatggagggagcgtcctctcttctaaatgacaac
gttagcttgcagatctcccacaacagcctttttgaccttataaactctttgggtctgcct
tcaatggattaa
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