Myxocyprinus asiaticus (Chinese sucker): 127437916
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Entry
127437916 CDS
T08782
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03030
DNA replication
masi03410
Base excision repair
masi03420
Nucleotide excision repair
masi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127437916
03410 Base excision repair
127437916
03420 Nucleotide excision repair
127437916
03430 Mismatch repair
127437916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
masi03032
]
127437916
03036 Chromosome and associated proteins [BR:
masi03036
]
127437916
03400 DNA repair and recombination proteins [BR:
masi03400
]
127437916
DNA replication proteins [BR:
masi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127437916
DNA Replication Termination Factors
ELG1-RFC complex
127437916
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
127437916
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127437916
Check point factors
HRAD17(Rad24)-RFC complex
127437916
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_22
AAA_14
AAA_lid_RFC1
RuvB_N
AAA_24
AAA_assoc_2
ResIII
DEAD
ATPase_2
nSTAND_NTPase5
DUF815
AAA_16
AAA_7
PhoH
AAA_5
AAA_30
AAA_19
TIP49
Thioredoxin_6
AAA_2
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
127437916
NCBI-ProteinID:
XP_051549043
LinkDB
All DBs
Position
4:complement(55031245..55046932)
Genome browser
AA seq
334 aa
AA seq
DB search
MASTSKTQLQTRNLPWVEKYRPQTLDDLISHQDILSTIQKFINEDRLPHLLFYGPPGTGK
TSTILASAKQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSQSQMIPRL
EHVIQQESIDITPDGMKAIVSLSMGDMRRSLNILQSTHMAYGKVTEETVYTCTGHPLRSD
IANILDWALNKDFTTAYNQILQLKTLKGLALHDILTEVHLVIHRVDFPPSIRMGLLIKLA
DIEYRLSSGTNEKIQLSSMVAAFQAVRDIVVSDG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacaagtaaaacacaacttcagacaagaaatttaccatgggttgagaagtac
aggccacagacattagatgatctcatctctcatcaagacatcctgagcacaatccaaaag
ttcattaatgaagacaggttgcctcatctgctcttctatggacctccagggacagggaag
acctctactatactagcaagtgctaaacagctctacaaagataaagagttcaactccatg
gtcctggagttgaacgcttcagatgaccgtggtatagatgtggtgaggggacccatcctc
agctttgccagtacacgaaccatcttcaagaagggctttaagttggtaatcctggatgag
gcggacgctatgacccaggatgctcaaaatgctttaaggagagttattgagaagttcaca
gaaaacacccgattctgtctgatctgtaactacctctctaagattattcctgcgctgcag
tcccgatgcacacggtttcgttttgggcctctctctcagagccaaatgattcccagacta
gagcacgtcatacagcaggagagcattgacatcactccagatggcatgaaggccattgtg
tccctctcaatgggagacatgagacgatcactgaacattttacagagcacccatatggcc
tatgggaaggtgacagaggagaccgtctacacctgtactggacatcctctcagatcagac
atcgccaacatattggactgggctctcaataaagacttcaccactgcatataaccaaatt
ctgcagctcaaaactctgaaaggtctggcacttcatgacattttaacagaagtccatctt
gtcatacaccgcgtggactttccaccctccatacgtatgggcttgcttataaaacttgca
gatattgagtatcgtctgtcctctggaacaaatgagaagatccagctgagctcaatggtt
gctgcttttcaggcagttagagacatagtagtcagtgatgggtag
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