Myxocyprinus asiaticus (Chinese sucker): 127438124
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Entry
127438124 CDS
T08782
Name
(RefSeq) rootletin-like isoform X1
KO
K16469
rootletin
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
masi03037
]
127438124
Cilium and associated proteins [BR:
masi03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
127438124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
MscS_porin
EzrA
CENP-F_leu_zip
TPR_MLP1_2
APG6_N
Motif
Other DBs
NCBI-GeneID:
127438124
NCBI-ProteinID:
XP_051549375
LinkDB
All DBs
Position
49:247480..277110
Genome browser
AA seq
2002 aa
AA seq
DB search
MSGSENPNESKLEAVIQRLEESVLSEEKRLTVRGSSDESATCLPARVREIVSRNLRDTTA
GMSSVLSVQEENRVLQSELSRLEDLLAHSRAERDELAIKYSAISERLEQALRLDTGDGGR
DSPESRSLAQQNVDLRRRLDEEQAAYKRKLTAYQEGQQRQAQLVQKLQAKVLQYKKKCGD
LEHTLLEKSTELEKHKLTGRCDVSSNGDGRHEEECSSDLESALIRLEEEQQRSSGLSAVN
AMLREQLEQAGLANEALSQDIRRLTADWTKAREELEQRESDWRREEESFHSYFSSEHSRL
LALWRQVVAFRRYVCELKSATERDLSEMRNELVCGAQSVQLQCVSVCATLRTREDGSALI
LERETSQRLQLEQQLRETVTDMMTLQSNRDQLNSRLSEVVRETERLRARVDDKEQEIDTL
NKRLQDESSHEECELKSLRTHTAALHNTLREIAQLLLTDTECVDGNTEEFLMPLLTSSSS
SSSHIIPDTCLSALHSTLANRQLQLQELRERLQSAQSSVQQLRKQLGEVESCRREAELRV
QTLQGERDECRRERETAERERDRLRQERDKLSSKKDGVDKAAQAAQTQVQLLQLECERLQ
LAVTSAQRERDHEREERDAATLERDRARAQTDRIDQLREECESRASALRSELAAVKESLQ
QAAIERQLMETENKQLTDALNRCECSQADLSLLVSKLHSEESTLRDSLAKMSSMNESLAQ
DKSELNSLIIQLEEERSVLLSQRREAEQEKLTIRDELVRSEQDRLELDSARLSLHQSLQE
SELLRVGLEAELQTLRADRAKLQDKLTQLIGEVNVLEAELGSVRGEGDRQSAALEEAGRG
RAELARERAGLLVQLTASERENATLTEELAAFRSEREALESSLFEVQQQMNQTESRREQL
ESENQNLRLRNDNMTVELKRLRADRETVQSQSERERDALRDALTAAQQEAQRSLRTALSD
HQEELERLINEKEMLRRSLEAEQERALRRVREQLEEQMNKLERERDEFQEALCSQQRDRD
QRLLQAETDKQQALSMKEAEKAVLSEKVCSLQAELSTATLELERLNRETVILKDQERAAV
AALNAELQELRSQLQDTVTSHSRELRKLQENCADQQTRADTALQELEECRSLLLASEESS
NTARRDLLEMDKHLCQIRDAGEGHRRDGVELRRSLSDIAKERDALSQSNGQLREALRAAE
SERISVKRVCEEREQKLTLLEENLASAQKEVSDLRSCLREVERSRLEARRELQELRRQVK
VLDSDREQKGKQVAELQMRLSTEEQRDEERSRELISLKQRLTDTETNRNSLHKELCSLQR
RLSESELCWRSRERELTSQLQEARGCEKKLQDEARNLYVRAQTATDASAQMQLQLSEAQG
RLAATEAELSRAEAGRRDLEFRLCSLQSALTRTLGISSGGRSSSRGRSPAGSSPSSVTSG
MMSRHRSVSPLQCSLSPPKDVAGDVSPDNTVVLRPLSPEKTDAPLPVALPELDPESLRSS
LRDFLQELREAQRERDEARGQLGSLQRELQEVTGERDSTHQRLIQLHNTLQECQEDKRTV
DVKLSSAQALLQQQEDSLRKGERDRRALNDRIKELERTLLNTDTERKHVEEQCSKLRAGE
VRLEAERRRLREALEAAEGRGTRVELGRRSLEGELQRLRLSLKERETEKQTAHERHDSAI
KQVAECESRVSSLQREVDRLTVLLSKAQDGESVQRERALALSQSLQETTAAHSATQGRLA
ALQKTLGQAENERRQMQERVDGLRASVSDGKRNVATLTERVQTLQSELTQSQLRRSELET
EMHNMQEALRQRSDSLAEVQRSLQSAQTDKVSAEERLRSLQRAVALLETEKRDAERQAVR
LEKDKTALRNTLDKVERQKLKTEESSMRLCAEKGRLDRSLNSTEQELQDAQRQIVLLQTQ
LAELEQNHSMSEQSARLCEDAQREAERLRLSQREVERTLAARERAHRQRVKGLEEQLSTL
KEQLQQEIRRRTPIMTSASPVN
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttctgaaaacccgaacgagtccaaactggaggcggtgattcagaggttggag
gagagtgttctgtctgaggagaaacggcttacggttcgaggatcttcagatgaatctgcc
acctgtttaccagcacgagtgcgagagatcgtctccagaaacctccgtgacactactgca
gggatgtcatcggttctgtcggttcaggaggagaatcgtgttcttcagtcagaattgagt
cgtttggaggatcttctggctcacagtcgagctgaacgagatgaactggccattaaatac
agcgctatcagcgagagattggagcaggcactgcggttggatacgggtgacgggggtcga
gattcaccagagtctcgcagtcttgcgcagcagaatgtagatctgcgcagacgtttagat
gaagagcaggcggcgtataaacgcaaactcacggcgtatcaggaggggcaacagagacaa
gcgcaacttgtacagaaactacaggcgaaggttctgcagtataagaagaagtgtggagat
cttgaacacacgctgctggagaaatcaacagaactggagaaacacaaactcacaggtcgg
tgtgatgtgagcagtaatggtgatggcagacatgaagaagagtgcagcagtgatctggag
agcgccctcattcgtctggaggaggaacagcagaggagcagcggtctgtctgcagtgaac
gcaatgctgcgagagcagctagaacaggccggactggccaatgaggcgctcagtcaggac
atccgcagactcaccgctgattggaccaaagccagggaggagctcgagcagagggagtct
gattggaggagagaggaggagtctttccacagttacttcagcagtgaacacagtcgtctg
ctggcgttgtggaggcaggtggtcgcgttccgcagatacgtgtgtgaactcaagagcgcc
actgagagagacctgtcagagatgcgtaatgagctggtgtgtggcgctcagagtgtgcag
ctgcagtgtgtgagtgtgtgtgcgacactgaggactcgtgaggacggatcggctctgatt
ctggagcgagagacgagtcaacgactgcaactggaacaacagctgagagagacggtgact
gacatgatgacactgcagagcaacagagaccagctcaactcacggctgtcagaggtggtg
agagagacggagcgtctgagagctcgtgttgatgacaaagagcaggagatcgacacactc
aacaaaagactacaggatgagagcagtcatgaggagtgtgagctgaagtctcttaggaca
cacactgcagcactgcacaacacactgagagagatcgcacagctgctgttgactgacact
gagtgtgtggacggaaacactgaagagtttctgatgcctctgctgacatcatcatcatca
tcatcatcacacatcatacctgacacctgtctgtctgcactgcactccacactcgccaac
agacaactacagcttcaggagctgcgagagcgtctgcagtcggcgcagtcatcagtgcag
cagttgcgcaagcagctgggagaggtggagtcatgcagacgggaggcggagctccgtgtg
cagacgttgcagggagagagagacgagtgtcggagagagagagagacagcagagagagag
agagacaggctgagacaggagagagacaagctgagcagtaagaaagatggtgtggataaa
gcagcgcaggcggcacagacgcaggtgcagctgctgcaattggagtgtgagaggctgcag
ctggccgtgacatctgcgcagagagagagagaccacgagagagaagagagagatgccgcc
acactggagagagacagagccagagcgcagacagacagaattgatcagttgagggaggag
tgtgagtctcgcgcctcggctctgcgttctgaactggctgcagtgaaagagtctctccag
caggcggcgatagagagacaactgatggagacggagaataaacaactgaccgacgcactg
aacaggtgtgagtgcagtcaggcagatctctctctgttggtcagtaagctccattctgaa
gaatcgactctcagagattcactcgctaaaatgagcagcatgaacgaaagtctcgcacag
gacaaatcggaactcaacagcctcattatacagctggaggaggagaggagtgtgttgttg
tctcagcgcagagaagcagaacaagagaaactgaccattagagacgagcttgtgcgctcc
gagcaggacagactggagctggattctgcccgtctgtctctccaccaatcactgcaggag
tctgagctgctgagagtggggctggaggcggagcttcagacactgcgggcagacagagct
aaactacaagacaaactgacacagttgatcggcgaagtgaatgttttggaggcggagctt
ggctctgtgcgtggtgaaggagatcggcagagtgctgctcttgaggaagctgggcgtggc
cgggcggagctagcacgggagagggcggggcttctggttcagcttacggcatcagagaga
gaaaacgccacactgacagaagagctcgcggctttcaggtcagagagagaggctttagaa
tcgagtctattcgaggtgcaacagcagatgaatcagactgaatctcgccgtgaacaactc
gagtctgaaaaccagaacctgcgactgcgcaatgacaacatgacagtggaactgaagcgc
ttgcgtgcagacagagagacagttcagtctcagagtgaaagagagagagacgcattgaga
gatgcgctaacggcagcgcaacaggaagcgcagcgatctctgcgcactgctctctctgac
caccaggaggagctggagagactgatcaatgagaaggagatgctgaggcgcagtctggag
gctgaacaggagagggcgctgcgacgggtccgagaacaactggaggagcagatgaacaag
ctggagagagagcgagatgaatttcaggaagcactttgttctcagcagcgcgacagggac
cagagactgctacaggcagagaccgacaaacagcaggcgctgtctatgaaggaggcggag
aaggcggttctgtctgagaaagtgtgctctctacaggcagagctgagtactgcaacactg
gagcttgagagactgaaccgagagacggtgattctcaaagaccaggagcgggctgcagtc
gcagctctaaatgcagagctacaggaactgcgcagtcagctgcaggacacagtcacttca
cacagccgtgagctgcgcaaactgcaggagaactgcgcagaccagcagacacgagcagat
acagcactccaagagttggaagaatgtcggtcgctactcttggccagtgaggagagcagc
aacactgcgaggcgggatcttttggaaatggacaaacatttgtgccaaataagggatgcg
ggggaggggcatagacgagatggggtggagctacggcgctcccttagtgatatcgctaaa
gagagggacgctctcagccaatcaaatgggcagctgagggaagcgctgagagcggcagag
agcgagagaatcagtgtgaagcgtgtgtgtgaggagagagagcagaagctgacgctgctg
gaagagaatctggcgtctgcgcagaaggaggtgtcagatctgcgcagctgtctacgtgag
gtggagagatccagactagaagcgcgcagagagctgcaggagctgcgcagacaggtaaaa
gtactggactcagatcgtgagcagaagggaaagcaggtggctgaactgcagatgcgtctg
tctacagaagagcagagagatgaagagagatcacgagaactgatctcgctcaaacagaga
ctcactgacactgaaactaacagaaactctcttcacaaagagctgtgttctctgcagcgg
cgtctcagtgagagcgagttgtgttggcgcagtcgcgagcgagagttgacgtcacagcta
caagaagctcgcggctgtgagaagaagctacaggacgaggcgcgtaacctctatgtgcgc
gctcaaactgccactgatgcatctgcgcagatgcagctgcagctcagtgaggcgcaggga
cgtctggctgcaacggaggcagagttatcacgtgcagaggcgggccgcagggatctggag
ttcagattgtgcagcctgcagtcggcactcacgcgtacgctgggcatcagcagcgggggg
cggagcagcagtagggggcggagtccggcaggctcctccccttcatctgtgacctctggg
atgatgtcacgccacaggagtgtgtctccactacagtgctcgctgtcgccacccaaagat
gtggctggtgatgtctctcctgataacactgtggtgttgcggccattatctccagagaag
acagacgccccgctgcccgtcgccctgccggagctcgaccctgaatcactgcgcagcagc
ctgagagatttcctgcaggagctgcgagaggcgcagagagagcgggacgaggcacggggt
cagctggggtcactgcagagggagttacaggaagtgacgggagagagagactccacccat
cagcgactcatccaactacacaacacactacaagagtgccaagaggataagcgtactgtg
gatgtgaaactgtcgtccgctcaagcgttgctgcagcagcaggaagactcactgcggaaa
ggagagagagacagacgagcattaaacgacagaatcaaagagctggagagaacgctactc
aacactgacactgaacgcaagcatgtcgaggagcagtgcagtaagctgcgcgccggagag
gtgcggttagaggcggagcgccggcggctgcgtgaggctctggaggcagctgaagggcgt
ggcacacgggtggagctggggaggcggagtctagagggcgagctacagagactgagactg
agtctgaaggagagagagacggagaaacagactgcgcacgaaagacacgacagcgctatt
aaacaggttgcggagtgcgagtctcgcgtctcatctcttcagagggaggtggacagactg
acagtgttgctgtctaaagctcaggacggagagagtgttcagagagaacgagcgctcgca
ctctcacagagtctgcaggaaaccactgcggctcacagcgccacccaggggcgactcgct
gcactgcagaaaacactgggacaggccgagaatgaacgcagacagatgcaggagcgtgtg
gatggactgcgagcgtccgtctctgatgggaagcgtaatgtggccactctcactgagcgt
gtgcagacattgcagtcagaactgacccagagtcagctgcgcagatctgaactagagaca
gagatgcacaacatgcaggaggctctgcggcagagatccgacagtctggccgaggtgcag
cgcagtctacagtctgcacagacagacaaagtgtctgcagaggagcgcctgcgcagcctg
cagagagccgtggcgttactggagaccgagaagagagatgcagagagacaggccgtccgc
ctggagaaagacaaaactgcactgagaaacacactggataaggtggagcgacagaaactg
aagacagaggagagcagcatgcgtctgtgtgcagagaaagggcgactggaccgctcgctg
aacagcacagaacaagagctgcaggacgcgcagagacagatcgtgctgctgcagactcag
ctggcagaactggagcagaatcacagtatgagcgagcagtcggcccgtctgtgtgaggac
gctcaacgtgaggccgagagactgcgcctcagtcagagagaagttgaacgaacgctcgcg
gcccgtgagagagcccaccgtcagcgcgtcaagggtctggaggaacagttgtccactctg
aaggagcagctacagcaggagattcgacgcagaacgccgataatgacgtctgcatctcct
gtaaactga
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