KEGG   Myxocyprinus asiaticus (Chinese sucker): 127438201
Entry
127438201         CDS       T08782                                 
Name
(RefSeq) protein SEC13 homolog isoform X1
  KO
K14004  protein transport protein SEC13
Organism
masi  Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03013  Nucleocytoplasmic transport
masi04141  Protein processing in endoplasmic reticulum
masi04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:masi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127438201
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127438201
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    127438201
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:masi03019]
    127438201
   04131 Membrane trafficking [BR:masi04131]
    127438201
Messenger RNA biogenesis [BR:masi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     127438201
Membrane trafficking [BR:masi04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    127438201
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    127438201
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    127438201
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 WDR55 Beta-prop_Vps41 NBCH_WD40
Other DBs
NCBI-GeneID: 127438201
NCBI-ProteinID: XP_051549553
LinkDB
Position
49:complement(24562569..24580142)
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSLKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWDKMYEYTGHDSSVNSVCWGPYDFGLIL
ACGSSDGAISVLTCSGDGHWDIKKINNAHTIGCNAVSWAPAVVPGSLIEQPTGQKPNYIK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPMGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWACIS
DVNKGQGAVSSITDTQQSEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtgtctgtaataaacacagtggacacctcacatgaggacatgattcatgatgcgcag
atggattactacgggaccagactggccacctgctcctctgatcgctctctgaagatcttt
gatgtcaaaaacggaggacagatccttgtggctgatctgaggggtcacgagggtccagtg
tggcaggtggcgtgggctcatcccatgtatggcaacattctggcatcctgctcgtatgat
aggaaggtgatcatctggaaagaggagaacggcacctgggataagatgtatgaatacact
ggccacgactcctcggtgaattctgtatgctggggtccatatgactttggtttgattctg
gcctgtggcagctcagatggtgcgatttcagtgttgacctgttctggtgatggacactgg
gacattaagaagatcaacaatgcacatacaattggctgtaatgcagtgagttgggcccca
gctgttgttccagggagtctgattgagcagccaacaggacagaagccaaactacatcaag
agatttgtgtctggaggctgtgacaatctggtcaagctgtggaaagaggaggatggccaa
tggaaagaggaccagaagctggaggcacacagtgattgggtgagagatgtcggctgggct
ccttccattggtctgcccaccagcacaatcgctagctgctcacaggacggccgtgtgttt
atctggacatgtgacgacccaatgggcaacacctggacagccaaacttctccacaaattc
aatgacgtggtgtggcacgtgagctggtccatcactggaaacatcctggctgtgtccggc
ggggacaacaaagtgaccctttggaaagagtctgttgatggacagtgggcgtgtatcagt
gatgtcaacaaaggccagggggctgtatcctccatcacagacacccaacagagcgagcag
tga

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