Myxocyprinus asiaticus (Chinese sucker): 127438377
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Entry
127438377 CDS
T08782
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1S subunit, a isoform X1
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04010
MAPK signaling pathway
masi04020
Calcium signaling pathway
masi04260
Cardiac muscle contraction
masi04261
Adrenergic signaling in cardiomyocytes
masi04270
Vascular smooth muscle contraction
masi04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127438377
04020 Calcium signaling pathway
127438377
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
127438377
09153 Circulatory system
04260 Cardiac muscle contraction
127438377
04261 Adrenergic signaling in cardiomyocytes
127438377
04270 Vascular smooth muscle contraction
127438377
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
masi04040
]
127438377
Ion channels [BR:
masi04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127438377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
DUF2670
Motif
Other DBs
NCBI-GeneID:
127438377
NCBI-ProteinID:
XP_051549879
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All DBs
Position
49:600403..634642
Genome browser
AA seq
1782 aa
AA seq
DB search
MEGSGEAPMSSFIMDEETLKRKQREKLKKLQATGGNPRPARSLLFLTLKNPFRKACINIV
EWKPFEIIILLTIFANCVALAVFMPMPEEDTNNTNSNLESLEYIFLIIFTMECFLKIVAY
GFLFHADAYLRNCWNILDFVIVTMGLFTIVVDFINNISGVEAPVEQKGGFDMKALRAFRV
LRPLRLVSGVPSLQVVMSSVLKSMLPLFHISLLVFFMVTIYAIIGLELFKCKMHKTCYYT
GTDVIATVENEKASPCAQAGNGRSCTLNGTECRGGWPGPNNGITHFDNLGFSMLTVYQCI
TTQGWTDVLYWVNDAIGMEWPWLYFVTLILLGSFFILNLVLGVLCGEFTKEREKSSRSGE
YQQLRERQQFDEDLKGYMEWITQAEVMDNDQEGQGLLPLQKDGSETESLYELEGLNKLMY
YVRHARRWNRFFRRKCRVWVKSRLFYWLVIFLVFFNTLAITTEHHQQSESLTKFQDNTNK
VLLSLFAVEMFLKMYAMGLPSYFMSLFNRFDCFVVSVGILELILVNMDVMSVMGISILRC
IRLLRLIKVTRYWTTLSNLVASLLNSVRSIASLLLLLFLFIVIFALLGMQVFGGKFNFSD
QNVRRSNFDNFPQALITVFQILTGEDWNSVMYDGIMAHGGPAIPGILVSIYFIILFICGN
YILLNVFLAIAVDNLAEAESLTSAQKEKAEEKKRKKLLRENLPDKVEEEKAMLAKKLAEQ
RAKIEGIPTTAKLKVDEFESNVNEIKDPFPPADFPGDDEEEEPEIPLSPRPRPMADLQLK
ETVVPMPEASSFFIFGPQNKFRKLCHCIINATTFTNIILLFILLSSISLAAEDPIDPMSF
RNQVLAYADIVFTSVFTAEIVLKMTTYGAILHKGSFCRNSFNILDLIVVGVSLLSMGMES
SAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLDFVFACIGV
QLFKGKFYACTDPLKMTAVECRGTFIKHQENALHDMVLRERKWINSDLNFDNILNGMLAL
FTVSTFEGWPKLLYKAIDSNLEDVGPIYNNRIEISIFFIVYLILIAFFMMNIFVGFVIVT
FQEQGEQEYKNCELDKNQRQCVQYALKARPLRCYIPKNPYQYQVWYIVTSCYFEYLMFLL
IMLNTMCLGMQHCNQSDHITHLSDMLNIIFTVLFTVEMILKLGAFKAKGYFGDPWNVFDF
VIVVGSIVDVILSEIDAALAAQGGLYCLTGCSEVNPMQAIADSENMSVSITLFRLFRVMR
LVKLLNRFEGIRNLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALIDGTVINR
NSNFQTFPQAVLLLFRSATGEAWQEIMLGCLYGQRCDPKSDYLPGEEYTCGSGFAVLYFM
SFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKKIWAEYDPEATGRIKHLDV
VTLLRRIQPPLGFGKFCPHRVACKRLISMNMPLNSDGTVTFNATLFALVRTALKIKTEGN
FEQANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQDHFRKFMKRQEE
YYGYRPTKKNKNTTEIQAGLRSIEDEAAPELQRAISGDLLNDEEMDRAMDEAAEEGIYRR
AGGLFGNHVDPFNMERGTPMPTQVTSQRPLQITDSRTDETEASPSSPSYLTYHANTNNNN
TNNNSTRQRCDLHFSSGTSASRHYGSVSAADFLIQEALLAGGLEGLASDCRFVSVTKAEM
AAALSMDVNVLERNSAAILNKRRGPCVVRERSSPPDIAHCLV
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atggaggggagcggtgaggcacctatgagttccttcatcatggatgaggagactttaaag
agaaaacagagagaaaaactcaagaaactccaggctaccggcggaaacccgcggcccgcg
cgctccctcctcttcctcacgctgaagaatcccttccgcaaggcctgcattaacatcgta
gagtggaaaccatttgaaatcatcatcctcctcaccatcttcgcaaactgcgtagctctc
gctgttttcatgccaatgcctgaagaagatacaaataacaccaacagcaacctagaaagt
cttgagtacatatttcttatcatattcactatggaatgtttcctgaagatcgttgcatat
ggatttctctttcatgcagacgcgtatttacggaactgctggaatatattagactttgtc
attgtaacaatggggttgttcactattgtggtggacttcatcaataacatcagtggtgtg
gaggctccagtggaacaaaaaggtggttttgacatgaaagccctcagagcattcagggtc
ttgcggccccttcgcctcgtatctggggtccccagtctgcaggtagtgatgagttctgtt
ctcaagtccatgctgcccctgttccacatctccctgctggtcttcttcatggtcaccatc
tatgccatcattggcctggagctttttaaatgcaaaatgcataaaacatgttactacact
ggcacagatgtcattgctacagttgaaaatgagaaggcatctccgtgtgctcaggctggt
aacggtcgtagctgtactctgaacggaactgagtgtcgtgggggttggcccgggcccaat
aacggcatcactcactttgataatctgggtttctccatgctcactgtataccagtgcatc
accactcagggctggacagatgttctgtactgggtgaatgatgcaatcggaatggaatgg
ccctggttgtattttgtgactttgattctgttgggttcattcttcatcctgaatcttgtt
ctgggggttctgtgtggtgaattcactaaggagagagagaagagttctcggagtggcgaa
tatcaacaattacgagagcgtcaacagtttgatgaggatctgaaggggtacatggagtgg
atcacacaggcagaagtcatggacaatgaccaggagggccaaggtctgctcccactgcag
aaggacggatccgagacggagagtctctatgagcttgaaggactgaataaactcatgtac
tacgttcgtcatgcacgacgctggaaccgttttttcagaaggaagtgtcgtgtttgggta
aagtccaggctgttctactggttggtaattttcctggtgttcttcaacactctggccatc
acaacagaacatcatcaacagtctgaatccctcaccaagttccaagacaataccaataag
gtgctgttgtctctgtttgcggtggaaatgtttctgaagatgtatgcaatgggactgccg
tcgtacttcatgtctctcttcaaccgtttcgactgctttgtggtgtctgtggggatcctg
gagctcattcttgtaaacatggatgtcatgtccgtcatggggatctccatactgcgctgt
attcggctactgcgtctcatcaaagtcacaaggtactggacgaccctcagtaatctcgtg
gcatccctcttaaactcggtgcgctccatcgcctccctgctgcttctcctcttcctcttc
attgttatcttcgctctgctcggcatgcaggtgttcgggggaaagtttaatttttcagat
cagaatgtgagacggagcaattttgacaattttcctcaggcactcatcacagttttccag
attctgacaggtgaggactggaactctgtcatgtatgatggaatcatggctcatggaggt
ccagcaatacctggaatcttggttagcatttacttcataatcctattcatctgcggaaac
tacatcctcctgaacgtgttcctggcaattgcggtggataatctggcagaggccgaaagc
ctgacttctgctcagaaagagaaggcagaggagaagaaacgcaaaaagcttctcagagaa
aacctccctgataaggtagaggaagagaaggctatgttggcgaagaaactagctgagcag
agagccaagattgaaggaattcccaccacagctaagctcaaagtggatgaatttgaatca
aacgtaaatgagattaaagatccatttccaccagccgattttccaggtgacgatgaggag
gaggagccagagattcccctcagccctcgacctcgtccaatggcagacctgcagctgaag
gagacagtggtgcccatgccagaggccagttccttcttcatcttcggcccacagaacaag
ttccgtaaactctgccattgcatcatcaatgccacaacctttaccaacatcatcctcctc
ttcatcctgctcagcagtatctcactggctgccgaggatcctattgacccgatgtctttc
aggaaccaggtcctggcctatgctgatatcgtattcacctcggtttttactgcagagatt
gtgctgaagatgaccacgtatggtgccattttacacaagggctctttctgtcgtaattcc
ttcaacatcctggatttgattgttgttggggtctccctgttgtccatgggaatggagtca
agtgccatctctgtggtaaagattctcagagtcctgagagtgttgagacctttaagagcc
ataaatagagccaaaggtctgaagcacgtggtccagtgtgtgtttgtggccatcaagacc
atcggcaacatcgttttagtcacgatgctcctggatttcgtgttcgcctgcattggggtt
cagcttttcaaggggaaattctacgcttgcacagacccactcaaaatgacggcggtagaa
tgcagaggaacgtttataaaacaccaggagaacgctcttcacgacatggtgctccgggag
cgcaagtggatcaacagcgacttaaactttgataacattctgaatggcatgctggccctc
ttcacggtttcaacattcgagggctggccaaagttgttgtataaagccatcgactctaat
ctggaggatgtcggccccatttacaacaaccgcattgagatttccatcttcttcatcgtc
tacctcatcctcatcgccttcttcatgatgaacatctttgttggctttgtaattgtcact
tttcaggaacagggagagcaggagtacaaaaactgtgagctggacaaaaatcagcgtcag
tgtgtccagtacgccttgaaggcccgtcctctgaggtgctacatccctaagaacccctat
cagtaccaggtgtggtacatcgtcacttcctgttactttgagtacctgatgtttcttctc
atcatgctcaacactatgtgtctagggatgcagcattgcaaccagtcagatcacatcacg
catctgtctgacatgctgaacatcatcttcactgtcctgtttacggtggaaatgatcctc
aaacttggtgccttcaaagccaaaggttactttggagacccctggaatgtctttgatttc
gtcatcgtggtgggcagtattgttgacgtcatactgagtgaaattgatgctgctctagct
gctcaaggtggactttactgtcttacgggctgttctgaagtgaatccaatgcaagcgata
gcagattctgagaatatgagcgtgtcgatcacattgttccgactcttccgtgtcatgcgt
ctggtgaaactcctgaatcgttttgaggggattcgtaacctgctgtggaccttcatcaaa
tcatttcaggctttgccatatgtggctcttctcatcgtcatgctgttcttcatctacgcc
gtcatcggcatgcaggtgtttggcaaaatcgcgctaatagacggaactgtgatcaaccgc
aacagcaacttccagacgtttcctcaagctgttcttctgctgttcaggagtgctacaggt
gaggcgtggcaggaaataatgttgggctgtttgtacggtcagcgctgtgacccaaaatca
gattacctacctggagaagagtacacctgtggctctggattcgctgttttgtacttcatg
agtttttacatgctatgtgctttcctgatcattaacctgtttgtggctgtgatcatggac
aactttgactatctgacccgtgattggtcgattctggggccgcatcatttagatgagttt
aagaagatctgggctgaatatgaccctgaggccacgggacgcattaaacacctggatgtt
gtgacattattgaggagaatccagccaccgcttgggtttggaaagttctgtccccatcgt
gttgcctgtaagagactgatttccatgaacatgccattaaacagcgatggaactgtaacg
tttaacgccactctgttcgccctggtccgaacggcactgaaaatcaaaacagaaggtaat
tttgagcaggccaatgaggagctgcgtgcaattattaagaagatttggaaacggaccagt
atgaaactgctggaccaggtcatcccaccaatcggagatgatgaggtcacagtggggaag
ttttatgccaccttcctgatccaagaccacttcaggaagttcatgaagcgtcaggaggaa
tattacggataccgaccgacaaagaaaaacaaaaacaccacagagatacaggcgggtctg
agaagcattgaggacgaagccgcccccgagctgcagcgggcgatctctggagatcttctg
aacgatgaggagatggacagagcgatggatgaagccgcagaggagggaatctacaggcga
gcaggtggcctgtttgggaatcatgtggatccgtttaatatggagcgaggaaccccgatg
cccacccaggtgaccagtcagcgccctctacagatcacagacagcagaacagatgagacg
gaggcctcacccagctcgccctcctatctgacttaccatgccaacacgaataacaacaac
acaaacaataacagcaccagacagagatgtgatctacatttctcatctggcaccagtgca
tccagacattatggttctgtgagtgcagctgacttcctcattcaagaggctctgctcgct
ggagggttggagggtctggccagcgactgtcgcttcgtgtctgtaacgaaggcagagatg
gccgcggccctgagcatggatgtcaacgtgctggagaggaattcagcagccattcttaac
aaacgtagaggcccgtgtgttgttagagagaggtcctctcctccagatattgcacactgc
ttggtgtag
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