KEGG   Myxocyprinus asiaticus (Chinese sucker): 127438621
Entry
127438621         CDS       T08782                                 
Name
(RefSeq) roquin-1-like isoform X1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
masi  Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:masi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:masi03000]
    127438621
   04121 Ubiquitin system [BR:masi04121]
    127438621
Transcription factors [BR:masi03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    127438621
Ubiquitin system [BR:masi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    127438621
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-C3HC4_4 zf-RING_2 zf-CCCH_4 zf_CCCH_4 zf-RING_UBOX FYVE RA Baculo_IE-1 Prok-RING_4 zf-C3HC4
Other DBs
NCBI-GeneID: 127438621
NCBI-ProteinID: XP_051550274
LinkDB
Position
50:complement(17752534..17782960)
AA seq 1086 aa
MPVQAPQWTEFLLCPICMQTFEESHRKPISLGCGDTVCKMCLNKLHRKACPFDQTAINTD
IEQLPVNTALLQLVSGQVSSPQPVTLLTAAEDIKHYEESRTCVEDLALYLKPLSNTRGAG
LNDAAQCMLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGDRTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNCLRPHLELL
ADIDPSPDAPAPTWEQLAKGLEAVRTVVHGLVDFIQNHSKKGGDQQQPPQHNKFKTYMCR
DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLGMRHQLSQSLTHLNEMDLGAGLLPEEG
LSMEVLPHKPTPITNGILPAGPGSTLTHLVSRGSKPSFDPSLKPGKMDSGSFSAPGSPPD
SLDPVPKTGMPRNPHSRMAGDGVFGQRHMSAGPRVPHMHPPHQSEQYYPEKRAPPTSAQY
ESSQYAAGNTYPHHHGHQRYGRHPAPPPEPGMPLYQDSYPNSYTSERQYTNPTSSTNYGY
PSHHDGRRHPAYSGHPHSQAFPPREELVRRSPAPLDVPPPLQPQSSASSYFPESAQERYA
TENYNHSSHIRNYHRNAYTRAQPSLDYLHRRRQEIMAQLEERTVVSPPTFGSSSSLSHLY
DPNYPQEMRGQSHYMEKNSHGFGHIQETDYTASYSPWSCDTFGSYIGSKDMKSKEGINAI
EQNAGKGLRAHGLELQRRDVKDDDPIIPFGSLPTVSRFGAISRTSKPGYPPNSPIPPLPN
SAKHTASAADYTYGNHRGWSSDSYQQHQMSQGHFSERLSPVVQAREQLRMELQQVNQQIS
QQSRGLENSSSVMSQPSRVDWSSHSLSSEQLSLELDQVEREIGMRTQGMAMENHDGKYKL
VSVENGQEERALQRDEHPLTRSESSNGSIVLPHDCGLISSSMSSLTSKTSSLSLSSEQVE
NGVVHS
NT seq 3261 nt   +upstreamnt  +downstreamnt
atgcctgtgcaagccccgcaatggaccgagtttctgttgtgtcccatctgcatgcaaacc
ttcgaggagagccaccgcaagcccatcagcctgggctgcggggacactgtgtgcaaaatg
tgcctgaacaaactgcatcgcaaggcctgcccgttcgaccagaccgcaatcaacacagat
atcgagcaactgcctgtcaacacagcccttctacagcttgttagtggacaggtttccagt
cctcagcctgtcaccttactgacagctgcagaggacatcaagcactatgaggagtctcgc
acatgtgtggaggacctggccctctatctcaaacccctcagcaataccagaggtgcaggg
ctgaatgacgccgctcagtgcatgctcagcagacccatgcaaagaaagctggtgactctg
gtgcactgtcagctggtggaggaggaaggccgcatcagggccatgcgggcggcccgatct
ctgggtgatcgtaccgtaactgagctcatccttcagcatcaaaacccccagcagctctcc
tccaacctgtgggccgccgtcagggccaggggctgccaatttctcggccctgccatgcag
gaagaggcattgaaactagtcttgcttgctctggaagatggttctgccctctcacggaag
gttctggtcctgtttgtggtccaaagactcgaaccccgtttccctcaggcctcaaaaacc
agcattggacacgtggtgcagctcctctacagggcttcctgcttcaaggtcaccaaacgt
gatgaggattcctccttgatgcaattgaaggaggagtttcgcacatatgaggctcttcgg
agggaacacgactctcaaatcgttcagattgctatggagggcggactgcgaattgccccc
gaccagtggtcctctctgctgtatggggaccagtcccacaaatcccacatgcagtcaatt
atagacaagttgcagacaccagcatcatttgctcagagcgtacaggaactcaccattgcc
ctgcagagaactggagatccagccaatctcaactgcctcagaccccatttggaactgctg
gccgacattgaccccagcccagatgcccctgcacccacatgggagcagctagccaaaggg
ttggaagcagtgcggacagtggtgcacggtctggtggatttcatccagaaccacagcaag
aagggaggtgaccagcagcagccaccccagcacaacaaattcaagacctacatgtgccgg
gatatgaaacagaaaggaggctgtcctcggggagcaagttgcacctttgcccactctcag
gaagaactggaaaagtaccgtaagatgaataaacgtttgggaatgcgtcatcaactcagc
cagtccctgacgcacctgaatgaaatggacctaggtgcaggtctgttgcctgaggaaggc
ctgtccatggaggtactcccacataagcccacccccatcaccaacggcatcctaccagca
ggccctggatccactctgacccacctggtttcaagaggctcaaaaccatctttcgaccca
tcccttaagccaggaaagatggactctggaagctttagtgcacccggctctcctccagat
tcattggaccctgtcccaaaaacagggatgcccaggaacccccactctaggatggcaggc
gatggtgtattcggacagaggcacatgtctgcagggcctagagttccccacatgcatcca
cctcaccagtctgagcaatactaccctgagaaaagagcaccacccacttccgcccaatat
gaatcctctcagtatgctgcaggtaatacttacccccaccaccacggccaccaacgctac
ggccgccaccccgctccacctccagagccaggcatgccactatatcaggactcttacccc
aactcctatacctcagagcgccagtacaccaacccaacctccagtaccaattatggatac
ccttcacaccatgatggtcgtcgtcaccctgcttactcaggccacccacattcccaagct
tttcccccacgggaggagctagtaaggaggagtccagcacctctggatgtccccccaccc
ctacagccccaaagttctgcttcatcatactttccagaatcagctcaggagagatacgcc
acggagaactataaccactctagtcatatcaggaattaccacaggaatgcctacactcga
gcacagccgtccctggactacctgcaccgccgcagacaggagatcatggcccagctggag
gagagaactgttgtctcgcctccaacctttgggtcctcatcctccctctcgcacttgtac
gaccccaactaccctcaggaaatgaggggacaaagccattacatggagaagaactcccat
ggtttcggacatatccaggagacggactacaccgcttcatattcaccttggtcatgtgac
acctttggttcctacattggaagcaaggatatgaagtccaaagaaggcataaacgccatt
gaacagaatgcgggcaagggtctaagagcgcacggcttggagcttcaacgcagagatgtc
aaagacgatgaccccatcattccctttggatccctgccgaccgtgtcccgctttggagcc
atctcacgcacatctaaaccgggctatccgccaaacagtccaataccaccgttgccaaac
tctgccaaacatacagcttctgctgctgactacacctatgggaaccacagagggtggagc
agcgactcctaccagcagcaccaaatgtctcagggacacttcagtgaacgtttgtcccct
gtggtgcaggcgagggaacagctgaggatggagctccaacaggtcaaccaacagatcagc
caacagagccgtggcctggagaactcaagctctgtgatgtctcaaccgtctcgagtggac
tggtcctctcatagtttatccagtgaacagctgagtcttgaactggaccaggtggagaga
gagatcggcatgaggacacaggggatggctatggagaaccacgatggcaagtacaagcta
gtttcagtcgaaaacggccaagaggaacgcgctctgcaacgagacgagcatccactgact
cgcagtgaaagctcaaatggctccattgtcttgccacatgactgtggtctcatcagcagc
agtatgtcctcattgaccagcaagacatcctctctcagtttgtcctcggaacaggtggag
aacggagttgttcattcttag

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