Myxocyprinus asiaticus (Chinese sucker): 127438940
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Entry
127438940 CDS
T08782
Name
(RefSeq) collagen alpha-1(VIII) chain-like
KO
K23455
collagen type VIII alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
127438940
NCBI-ProteinID:
XP_051550826
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Position
50:complement(9074446..9099148)
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AA seq
733 aa
AA seq
DB search
MAEPLLSARLFVLVEHLFLLHHIHAGAFYGHQPLPQQHQPLPQLPHLLHGNEGIPQHHYH
GKEMPHMPYENEMPLPPHYGKERPQIPMHMGKPNLGKGETIPRGEKGVTGEAGPMGPPGP
QGPPGLPGHGIPGPPGKPGPQGPPGFPGIGKPGMPGLPGKPGGIGLPGPKGELGPIGGGG
PIGLPGPPGLPGPHGLPGVGKIGGQGLPGQPGPRGEPGDKGLPGLPGIPGLKGENGIGLP
GLPGVKGPSGLPGPPGQGGLPGVGKPGLNGLPGAPGWPGKPGAPGEPGLAGFPGDRGQTG
PPGLAGFGKPGLDGLPGKPGLQGGRGQPGPPGLPGGPGLPGFGKPGYPGPKGEKGYSGLP
GPQGPKGEKGHGGLPGMIGPPGPSGLPGPPGLLGPPGGIGFPGPKGEGGSVGPKGQLGPK
GEPGPAGLPGKSGFPGGFGQPGPRGLPGSLGPKGENGHKGLPGLPGAPGKPGAKGEGGFP
GEIGHPGPMGIPGLKGPAGPIGPPGLPGPKGEYGPPGKPGPPGEGKPGLQGPLGPPGIPG
PGGPTGQPGRPGLPGPPGPPGPPAQFPVAEQILPETGPGLDGIKGGYKKEKPGGAIFHRN
GLEMPAFTAQLTTPFPSVGQPVVFNKLLHNGNQNYNPQTGIFTCKIPGIYYFAYHVHCKG
GNVWVALYRNSEPVMYTYDEYKKSYLDQASGSAVLPLQTGDTVHVQLPSDQAAGLYAGPY
IHSSFSGYLLYPI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcctctcctctctgcccgcttgtttgtactggtggagcacctctttctgttg
catcatatccatgcaggggcattttatgggcaccaaccactgccccaacagcaccaacct
ctgccacagttacctcacctgctgcatggcaatgagggaataccccaacaccattaccat
gggaaggaaatgccacacatgccatatgaaaatgagatgcctttgcctccacattatgga
aaagaacgtccacagatacccatgcacatgggtaaacccaatttaggaaaaggtgaaact
attccaagaggagagaaaggtgtcactggcgaagctggtccaatggggcctccagggcct
cagggccccccaggacttcctggtcatggcatcccaggacctcctggaaaacctggtccc
caaggtccaccaggattccctgggattggaaaaccaggaatgccaggattgccaggaaaa
cctgggggcataggtttaccaggaccaaagggtgaattaggaccaattggtggtggaggg
ccgataggattgccgggacctccaggtcttccaggaccccatggcttaccaggagtggga
aaaataggtggacaaggacttccaggacaacctgggccccgtggagaacctggagataag
ggccttcctgggctccctggcatcccagggctaaaaggtgaaaatggaattggtctccca
ggactgccgggtgtaaagggaccttctggacttccagggccaccaggacaaggagggcta
ccaggtgttggcaagccaggactgaatggactacctggggctcctggatggccaggtaag
cctggtgcacctggagaacctggactggcaggatttccaggggacagagggcaaacaggg
ccaccaggactagcaggttttggtaaacctggtttggatgggttgccagggaaaccaggt
ctccaaggtggaagaggtcagccaggtccccctggtttacctgggggtccaggtttgcct
ggatttggcaagcctggatatcctggccccaaaggtgaaaaagggtatagtgggttgcct
ggccctcaaggcccaaaaggtgagaagggtcatggtggtcttcctggaatgattggacca
ccaggtccaagtggcctcccgggtcctccaggtctcttgggacctcctggaggcattggt
ttccctggtccaaagggagagggaggttcagtaggaccaaagggacaattaggtccaaaa
ggtgaaccaggacctgcaggacttccaggaaaatcaggatttccaggaggattcgggcag
ccaggacctagaggcttacctggttcgttggggcctaagggtgaaaacggacacaaaggc
ttacctggcctacctggagcccctggaaagcctggtgcaaaaggagaaggtggatttcca
ggagagataggtcatccagggcctatggggatcccaggattaaagggtccagcaggacca
attggaccacctggtctcccagggccaaaaggggaatatgggccaccaggaaaacctgga
ccaccaggcgagggaaaaccaggacttcaaggcccattaggtcctcctggtatacctggg
cctggtgggcccactggtcagcctggaagacctggtcttcctggccctcctgggccacct
gggcctcctgctcagtttcctgttgctgagcaaatccttcctgagacaggtcctgggcta
gatggaatcaaaggtggttataagaaagaaaagcctggtggagctatatttcataggaat
ggcctagagatgcctgcatttactgctcagctaacaacaccatttccttcagttgggcaa
cctgttgtcttcaacaagcttctacataatggaaaccagaattacaaccctcaaacaggc
atcttcacttgcaaaatacctggaatttactactttgcctaccatgttcactgcaaaggg
ggaaatgtatgggtggccttgtacaggaacagtgagccagttatgtacacatatgatgaa
tacaaaaaaagttacctggatcaggcatcagggagtgcagtgctgcctttacaaactgga
gatactgtacatgtccagctaccatcagaccaagctgcaggactttatgctggtccatac
atccactcatcattttctgggtatttattatatcctatctga
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