Myxocyprinus asiaticus (Chinese sucker): 127439096
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Entry
127439096 CDS
T08782
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03013
Nucleocytoplasmic transport
masi04141
Protein processing in endoplasmic reticulum
masi04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127439096
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127439096
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
127439096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127439096
04131 Membrane trafficking [BR:
masi04131
]
127439096
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127439096
Membrane trafficking [BR:
masi04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
127439096
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
127439096
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
127439096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_Vps41
Beta-prop_WDR41
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
127439096
NCBI-ProteinID:
XP_051551103
LinkDB
All DBs
Position
50:complement(8523323..8531952)
Genome browser
AA seq
320 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWDKMYEYTGHDSSVNSVCWGPYDFGLIL
ACGSSDGAISVLTCSGDGHWDIKKINNAHTIGCNAVSWAPAVVPGSLIEQPTGQKPNYIK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPSGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWACIS
DVNKGQGAVSSITDNQQNEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgtaatcaacacagtggacacctcacatgaggacatgattcatgatgcacag
atggattactacggtaccagactggccacctgctcctctgatcgttctgtgaagatcttt
gatgtcaaaaatggaggacagatccttgtggctgatctgaggggtcatgagggtccggtg
tggcaggtggcgtgggctcatcctatgtacggcaacatcctggcatcctgctcgtatgat
aggaaggtgatcatctggaaagaggagaacggaacctgggataagatgtatgaatacaca
ggccacgactcctcggtgaactctgtatgctggggtccgtacgactttggtttgattctg
gcttgtggcagctcagatggtgcgatttcagtgttgacctgttctggtgatggacactgg
gacattaagaagatcaacaatgcacatacaattggctgtaatgcagtgagttgggcccca
gctgttgttccagggagtctgattgagcagccaacaggacagaagcccaactacatcaag
agatttgtgtctggaggctgtgacaatctggtcaagctgtggaaagaggaggacggccaa
tggaaagaggaccagaagctggaggcgcacagtgattgggtgagagatgtcggctgggct
ccttccattggtctgcccaccagcacaatcgcaagttgctcacaggatggccgtgtgttt
atctggacatgtgatgacccgtctggcaacacctggacagccaaacttctccacaaattc
aatgacgtggtgtggcacgtgagctggtccatcactggaaacatcctggctgtgtccggc
ggggacaacaaagtgaccctttggaaagagtctgtggatggacagtgggcatgtatcagt
gatgtcaacaaaggccagggggccgtatcctccatcacagacaaccaacagaacgagcag
tga
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