Myxocyprinus asiaticus (Chinese sucker): 127439630
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Entry
127439630 CDS
T08782
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like isoform X1
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
masi03041
]
127439630
03036 Chromosome and associated proteins [BR:
masi03036
]
127439630
Spliceosome [BR:
masi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
127439630
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
127439630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
LSM_int_assoc
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
RRM_occluded
RRM_11
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
127439630
NCBI-ProteinID:
XP_051551810
LinkDB
All DBs
Position
4:complement(48678187..48705049)
Genome browser
AA seq
955 aa
AA seq
DB search
MAAAGNEEQTLLPDIEEEAEGMEREMESEEEEEEGMGVEHSEEEDEEDTSEDERENEAEI
QRLEEQLSINVYDYNCHVDLIKLLQQEGKLHRLRKARQKMSELFPLTEEIWLDWLKDEIR
LTEDESDREKVYELFERAVKDYGCPEIWLEYVQYSIGGMGAQGGIDRVRSIFERALTEVG
LHVTKGSSIWEAYREFEIAIVSTVQPPPGSVPSQGQQELLNAQLERIHTLFRRQLAVPLM
DMEGTYAEYSDWADDGVPETVTHQYRRALQQMEKCKPYEEALMVSEPPKLAEYQTYIDFE
IKEGDPARVQIIFERALAENCLVPDLWIKYTTYLDRQLKIKELVLSAHERAVRNCPWTMD
LWKSYLLALERHGADHQTVADVFEKALNAGFMQATDYVEIWQSYLDYLRRRVDFSKEWSR
ELDELRAAFTRSLDYLKQDVEERFSESGDLSCTIMQIWARIEALHCKNMQKARELWDSIM
TKGNAKYANMWLEYYNLERSYGDAAHCRKALHRAVQCTSDYPEHVCDVLLNFERVEGCLA
DWDAAVQKTETKLNRVNEQRARLAEKEALVARQEEEKAEQRRKSKSDKKAQKKSQKANRT
GEKRKAEDEYEGEWGEDAELPSKRLKGEGDFGSMATEELMETESGLFGRRAPPPHKNEPP
GFRKHKQGANDAARQPQEMSQEQRKDENCVFVSNLAFNLEDPEGKLRNLFKSCGTIQQVR
PVFAAKGVFRGYCYVQFEGRLAVPEALKLDRQEVDGRPMFVSPCVDKNKNPDFKVFKYKT
SIEKHKIFISGLPYTCTKETLEELCKEYGTIKAIRLVTNRSGKPKGLAYVEYENETQASQ
AVLKMDGTMLENFTLSVAISNPPSRKMEDKAVPSRVLGGAMPRQPQGARGKGRTQISLLP
RSLYRQSAPDAKAENGTVSAPNSTVTDGMCEGPGTTGLQTKSLSNEDFARMLLKK
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggtaacgaagaacagacgttgttgcctgacatcgaggaggaggctgag
ggcatggagagagagatggagtctgaggaggaggaagaagaaggaatgggagttgaacat
tctgaggaggaggatgaagaggacacgtctgaggacgagcgggagaatgaagcggagatc
cagcggttggaggagcagctatcaatcaatgtatatgactataactgccatgtggacctg
atcaaactcctgcagcaggaaggaaagctgcacagactgcgcaaggccaggcagaagatg
agcgagctcttccctctcactgaagagatttggctggactggctgaaggatgaaattcgc
ctgacagaagacgagtcagatcgggagaaagtctacgagctgtttgagagggctgtgaag
gattatggctgcccagagatatggctggaatatgtgcagtactccatcggggggatggga
gcacagggaggcattgaccgggtccggtccatttttgagagggctctgacggaagtgggc
ttacacgtgactaaagggtcttcaatctgggaggcctaccgggagtttgagattgctatt
gtctccacagtgcagcctcctccaggcagtgttccgtcacaggggcaacaggagctgttg
aacgcccagctcgagcgcatacacacactcttcagacggcagctagctgtaccactgatg
gatatggagggaacatatgcagagtactctgattgggcagatgatggtgttcctgagacg
gtcacacatcagtacagacgtgccctgcaacagatggagaaatgcaaaccttatgaggag
gctttgatggtctctgaacctccaaaactggccgagtatcaaacctacatagattttgag
ataaaggaaggagatccggctcgagtccagatcatattcgagcgagcgctggcagaaaac
tgtcttgtcccagacctgtggatcaaatacaccacatatctggaccgtcaattgaagatt
aaagagctagtgttatctgctcatgagagagccgtcaggaactgcccatggaccatggac
ctgtggaagagctatcttttggctctggagaggcatggggctgatcatcaaacagtagca
gatgtgtttgaaaaggccctgaatgcaggattcatgcaggcaactgattatgtagaaatc
tggcaatcttatctggactacctgaggagacgtgttgatttcagcaaagagtggagcagg
gagttggacgagctgcgggcagctttcacgcgctcccttgattatctaaaacaggatgtg
gaagagaggttcagtgaaagtggagatctgtcctgcacaataatgcagatctgggcaagg
atagaggccttacactgtaagaacatgcagaaggcccgtgaactttgggacagcatcatg
acaaaagggaatgctaaatatgccaacatgtggctggaatattacaacttggaaagatca
tatggagatgctgctcactgtaggaaggccctccacagagctgtacagtgtacatcagac
taccctgagcatgtttgtgatgtcttgctcaactttgaaagagtagagggctgtctggca
gactgggacgctgcagttcagaaaacagagaccaaattgaacagagtgaatgaacagaga
gcaagattggctgaaaaagaggctctcgtagccagacaagaggaggagaaagctgagcag
aggagaaaatccaagtcagataaaaaagcccaaaagaagagccagaaagcaaacagaaca
ggggagaaacggaaagctgaagacgagtatgaaggggaatggggagaggatgcagagctc
ccatctaagaggctcaaaggcgagggtgactttggcagtatggctacggaggagctcatg
gagacagagagtgggctttttggacgtcgagcaccaccgccacataaaaatgagccacct
ggtttccgcaagcacaagcagggagcaaatgatgcagcacgtcaaccccaggaaatgtca
caggagcagcgtaaagatgaaaattgtgtctttgtcagtaacttggcctttaacctggag
gatcctgagggcaagctgcgaaatttgtttaaaagttgtgggactatccaacaggtacgg
ccagtgttcgcagcaaaaggtgtgtttagaggttattgctacgtgcagtttgagggccgg
ctggctgtacctgaagcattgaagctggacagacaggaggtggacgggcggcctatgttt
gtgtcaccttgtgtggacaagaataaaaatccggacttcaaggtttttaaatacaaaacg
tcaatcgagaagcacaagatctttatctcgggcctgccatacacctgcactaaagaaacg
ttagaggagctctgcaaggaatatggcacgatcaaagccatccgactagtcaccaaccgt
tcaggcaaacccaagggtttggcatacgtggaatatgagaatgagacccaggcatcgcag
gctgtgctgaagatggacggcaccatgctggagaacttcacactctctgttgccattagc
aaccccccgagcaggaagatggaagataaagcagtgcccagtcgagtcctggggggagcg
atgccaaggcaacctcagggagcaaggggaaaaggacgcacacagatctctctgctgcca
cgctctctgtaccggcagagtgctccagatgccaaagcggagaatgggactgtttctgca
ccaaacagcacagtgacagatggaatgtgtgaaggacctggaaccacgggcctgcaaacc
aagtccctgtccaatgaggactttgccagaatgctactcaaaaagtga
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