Myxocyprinus asiaticus (Chinese sucker): 127439964
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Entry
127439964 CDS
T08782
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127439964
03041 Spliceosome [BR:
masi03041
]
127439964
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
127439964
Spliceosome [BR:
masi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127439964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
XOO_2897-deam
Toxin-deaminase
Motif
Other DBs
NCBI-GeneID:
127439964
NCBI-ProteinID:
XP_051552249
LinkDB
All DBs
Position
4:44984150..45008924
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AA seq
340 aa
AA seq
DB search
MMMDEDQPKTLYVGNLSRDVTEALILQVFSQIGPCKSCKMIIDTAGNDPYCFVEFYENRH
AAAALAAMNGRKILGKDMKVNWASMPSSQKKDTSNHFHVFVGDLSPEISTDDVRSAFAPF
GKISDARVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAP
KPNNEASNKHLSFEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFPEK
GYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKETADMRSMQQMQIPQQNKPTYPAQ
SYGQWGQSYGNGQQMGQYMANGWQMPYGVYGQAWNQQGYK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggacgaggaccagcccaagacattgtatgtcgggaacctctccagggacgtg
acggaggccctcattctgcaagtgttctcccagatcggcccctgcaagagctgtaaaatg
attattgatacggctggaaacgacccgtactgctttgtggagttctatgagaacagacac
gctgctgcagctctggctgccatgaacggcaggaagatcttaggaaaggatatgaaagtt
aattgggcctcaatgccaagcagtcagaagaaagacacaagcaatcatttccatgtcttt
gttggtgacctgagcccagaaatctcaacagatgacgtcagatcagcctttgctcctttt
ggaaagatctctgatgcccgtgtggttaaggacttggccacaggcaaatctaaaggatat
ggttttatctccttcattaataaatgggatgcagagagtgccattcagcaaatgaatggc
caatggctgggaggcagacagatcagaacaaactgggccacaaggaagccgtcagcaccc
aaaccaaacaatgaagctagtaacaaacacttgtcctttgaggaggttctgaaccagtcg
agtcccagcaactgcactgtgtattgcggtggaattgcttctggcctttcagatcagctg
atgagacagacattctctccatttgggcaaataatggagatcagggttttcccagagaaa
ggctactcgtttgtgaggtttgactcgcatgagggtgccgcccatgctatagtgtccgtg
aatggcacctgcattgagggccacactgtgaagtgctactggggcaaagaaacagctgac
atgagatccatgcagcagatgcagataccccagcagaataaacctacctatccggcacag
tcttatggacagtggggccagtcatatggcaacggtcaacaaatgggccagtatatggcc
aatggctggcagatgccctatggagtctacgggcaggcttggaatcagcagggatataaa
taa
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