Myxocyprinus asiaticus (Chinese sucker): 127440105
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Entry
127440105 CDS
T08782
Name
(RefSeq) retinoic acid receptor RXR-alpha-B isoform X1
KO
K08524
retinoid X receptor alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03320
PPAR signaling pathway
masi04148
Efferocytosis
masi04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127440105
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
127440105
03320 PPAR signaling pathway
127440105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
masi03000
]
127440105
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
masi03310
]
127440105
Transcription factors [BR:
masi03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
127440105
Nuclear receptors [BR:
masi03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
127440105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
127440105
NCBI-ProteinID:
XP_051552462
LinkDB
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Position
4:complement(19462018..19565891)
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AA seq
519 aa
AA seq
DB search
METKPFLSLGLLKNPCSVAPPCLRSRPGDVGSSPSGCSGFTDAYPLQQRRISTESTGLSP
LSSSTGHRGISNHPLHPPLLSPSTMNSSPGQLHSPISTLSSPINGLPSPFPLISSPMGHP
SMSGPSSTSMTFRPSLSPQLSSPMNPVSCSEDIKPPLGLNGVMKVPAQPTGTSLSLTKHI
CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCIIDKRQRNRCQYCRYQK
CLAMGMKREEKKESHTGHTGHEAVQEERQRAKERSEGEFSSCANEDMPVEKILEAELAVE
PKTETYVEANLGVPANSPNDPVTNICQAADKQLFTLVEWAKRIPYFSDLPLDDQVILLRA
GWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHTAGVGAIFDRVLTELVSKMRDMQMD
KTELGCLRAIVLFNPDSKGLSNPSEVEALRERVYASLEAYCKQKYPDQPGRFAKLLLRLP
ALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaacctttcttgtctctagggctcctcaaaaatccatgctcagtagcgccg
ccgtgtttgcggagccggccgggcgatgttggcagttcgcccagtggctgctctggcttc
acggatgcgtacccactgcaacagcgcaggatatccacagaatccactggtctttctcct
ctcagctcctccacgggtcaccgaggcatcagtaaccaccctctccacccacccctgctc
agcccctccaccatgaactccagcccaggtcaactccactcacccatcagtaccctcagc
tcgcccatcaacggcctgccctcgcccttccctctcatcagctcgcccatgggccaccca
tccatgagcggcccgtcctccaccagcatgaccttccgaccaagccttagcccacagctc
agttcacccatgaatccagtcagctgttcagaggacattaaaccccctctgggtctgaac
ggggtgatgaaggtcccagcgcagccaacaggcacgtctctctcactcacgaaacacatc
tgtgccatttgtggagaccgctcatcaggtaaacactatggggtgtacagctgtgaaggc
tgtaagggcttcttcaaaagaacagtgagaaaggatctgacgtacacttgccgagacaac
aaagactgtataatcgacaaacggcaacgcaatcgctgccagtactgccgctatcagaaa
tgcttagccatgggaatgaagagagaagaaaaaaaagaaagtcatacaggtcatacagga
catgaggccgttcaggaggagcggcagcgggcaaaggagcggagcgagggagagttcagc
agctgtgccaacgaggacatgcccgtggagaagattctggaagccgaactggcagtggaa
ccaaagacggagacctacgtggaagccaacctgggtgtgcctgccaactctcctaacgac
ccagtaacaaacatctgtcaagcagctgacaagcaactctttactttagtggagtgggcc
aagcggataccttacttttctgatctcccgctggatgatcaagtcatcctcctgcgagca
ggatggaatgaactcctgattgcttctttttcacatcgttccatagctgtgaaagatgga
atattattagctacaggccttcatgtccatagaaacagtgcacacactgccggtgtggga
gccatctttgacagagtgctgacagagcttgtgtcaaagatgagagacatgcagatggac
aagactgaacttggatgtctgcgagctattgttctgttcaatccagactcaaaaggactg
tctaatccatctgaggtggaagcactgagggaaagagtgtatgcttctctggaggcctac
tgtaaacaaaaataccctgatcaacctgggagatttgccaagctgttattgcgtctgccc
gctttgcgctccattggcctgaagtgtcttgaacatctcttctttttcaagttaatcggg
gacacgcccattgacactttcctaatggaaatgcttgaagcgccacaccaaatgacttaa
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