Myxocyprinus asiaticus (Chinese sucker): 127440112
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Entry
127440112 CDS
T08782
Name
(RefSeq) tenascin-like
KO
K06252
tenascin
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04510
Focal adhesion
masi04512
ECM-receptor interaction
masi04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127440112
04518 Integrin signaling
127440112
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127440112
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
masi00536
]
127440112
Glycosaminoglycan binding proteins [BR:
masi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127440112
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
fn3
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Fn3_PBP1
DUF7949
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Fn3_Dep-1_2nd
Pur_ac_phosph_N
EGF
NDNF
EGF_PEAR1L
hEGF
fn3_2
SPE9_EGF_3rd
M-inducer_phosp
Motif
Other DBs
NCBI-GeneID:
127440112
NCBI-ProteinID:
XP_051552470
LinkDB
All DBs
Position
4:41499506..41559472
Genome browser
AA seq
1688 aa
AA seq
DB search
MGMRGLPLACVAVAILVQLSSAGLVKRVIRHRRESLFSPTTENLTIPSPDQPVVFNHVYN
INVPSGSLCSVDMDSPGTTEMKPKPEQSDQHIEHTMDGENQIVFTHRINIPKQACGCDNH
LPDLKDLLNRLEMLEAEVSSLREQCTSGAGCCGAQVRGEVTAKPYCSGRGNYSTETCSCL
CEPGWKGPNCSEPECPNFCQDQGRCEDGKCICFEGFGGEDCGIELCPVDCGENGECIDGA
CLCEEGFIGEDCSLTNCPNNCLGRGRCVDDECLCDEPWTGMDCSELICPNDCYDRGRCVN
GTCFCDEGFTGEDCGELTCPKNCNHRGRCINGQCVCNIGYSGEDCSKLTCLNDCNLRGHC
FNGKCICDPGFEGEDCSILSCPDNCNDRGQCVNGECICDAGYEGDDCSELSCHNNCHNHG
RCVNGKCICKVGFAGEDCSIKTCPNDCHGRGQCVDGKCVCHAGFTGHDCSELTCPNNCHN
QGRCVNGQCLCNSGFAGEDCDTKTCPNNCLDHGYCEDGKCVCFEGYTGVDCSVLTCPGNC
NDQGQCLNGMCICDLGFTGEDCSDISPPRDLTVTEVDPETVDLTWVNEMLVTEYLITYVP
TAPGGLEMEMKVSGEKKTATIRELEPGIEYLISVFAVLNNKMSVPVSARIATHLPEPEGL
KFRSVKETAVEVEWDPLNIPFDGWNLIFRNTKEEDGEISNSLTPPETTFEQSGLGPGQEY
EVKLEVVKNNTRGQPASRNVVTMIDAPSQVDVRDVTDTTALITWIQPVAQVDRISVSYGP
NTGSSDRNSIEVSSMDTQYHLAELYPDTEYEVSLMAHRGEMTSFPIYETFTTDLDAPKHL
KAVEQTDESITLEWKNSRANVLNYRIKYGPLSGGEHRELVFPSGPQDTTHAKLTGLKPGI
EYGMGVTSIKEERESLPVTTNAVTDLDAPKDLEASEATETTLVLVWRRPVAKIDLYRLVF
VSADGRIVEVEVPGGDNTYTLRNLNPGMLYTITLTAERGRKKSAPANLSASTDEKKPQVG
NITISDVSWDRFRVSWELERGELDGFLIEVSDPDGLADGQNHTLSGQESSLAVTDLSPST
FYRVTLYGLYRGDLLDPVFAEAITEAEPEVEHLLVSGITPHSLQLAWTAREDIFDTFAIK
VIDSNGLDQPHHIKVSGDRRTEVVTGLKEDTEYEIELFGIILGRKFQPILAVARTDLGTP
KGIRFSDVTDTSATVHWTMPHTRVDSYRVSYVPLQGGSPVTLRVDGGESQAILPNLTPGV
TYQVMVIAVKGLEESEPGSDRVTTALDKPRGLTAVNITDTEALLLWQPSIATVDGYVITY
SADTVTPVMKRVSGNTVEFEMSSLIPATQYTVKVYAVRDTSKSAATTTEFTTDVDAPQNL
AASNIQTDSAMLTWKPPRADISGYILSFESADGVLMEVVFSPTATYYSMSQLTASTEYTV
KLQAIAGPNRSRIVSTVFTTIGVLYRHPKDCSQALLNGDTTSGLYTIYLRGDENQPLQVY
CDMTNDGGGWIVFVRRQSGKVEFFRNWKNYTAGFGDLNDEFWLGLSNLHKITSSGQYELR
VDLRDKDESAYAQYDKFTVSEPRSRYKVHVGGYSGTAGDSMTYHHGRPFSTYDHDNDIAV
TNCALSYKGAFWYKNCHRVNIMGRYGDNSHSKGVNWFHWKGHEHSIEFAEMKIRPANFRN
FEGRRKRS
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atggggatgagaggcctgcccctggcctgtgtggcagtggccattctagtccaactctct
agtgctggcctggtcaaaagagtaattagacacagaagagaatcgctattttccccaacc
actgagaatttgaccatcccaagccctgatcaacctgtggtcttcaaccatgtatacaac
atcaatgtcccctctggatccctgtgctcggtggacatggattcacctggaacaacagaa
atgaagccaaaacctgaacaatccgaccagcacatagaacacaccatggatggggagaac
cagattgtatttacgcataggattaacattcccaaacaagcatgtggttgtgataaccac
ctacctgacctgaaggatcttctaaacaggttggaaatgctagaggcagaggtctccagt
ctaagggagcagtgcaccagtggagcaggctgctgtggagcacaggttagaggtgaagtc
acagccaaaccctactgcagtggccgtggcaactacagcactgaaacctgcagctgtttg
tgtgaacctggttggaagggacccaattgctccgagcctgagtgtccaaacttttgccag
gatcaaggccgatgtgaggatggcaagtgcatctgctttgagggtttcggtggtgaggac
tgtggaattgaactgtgtccagtagattgcggtgagaatggagagtgcattgatggggct
tgcctctgtgaggagggcttcatcggtgaggactgcagcttaaccaactgcccaaacaac
tgcctcggcaggggccgctgtgtagacgatgaatgcttatgtgatgagccctggacaggg
atggactgctctgagctcatctgtcccaatgactgctacgaccgtggacgatgtgtcaat
ggaacctgcttttgtgatgagggctttactggggaggattgtggggagcttacatgcccc
aaaaattgcaaccatcgtggaaggtgcatcaatggacagtgtgtgtgcaatattggctac
agtggagaagactgttctaagctaacatgcctcaatgattgcaatctgagaggtcactgc
ttcaatgggaagtgtatctgcgaccctgggttcgagggtgaggactgcagcattctctct
tgccccgacaactgcaatgacaggggccaatgtgtcaatggcgagtgtatttgtgatgct
ggatatgaaggtgatgactgctctgagctttcctgccacaataactgccacaatcatggt
cgttgtgtcaacggaaagtgcatttgcaaagtgggctttgctggagaagactgcagcatc
aagacctgtcccaatgactgccatggccgtggacagtgtgtggacggaaagtgcgtttgc
catgctggctttacaggccatgactgtagtgaactgacttgccccaacaactgccataac
caaggacgttgtgtaaatggccaatgtttgtgtaacagcgggtttgccggggaggactgt
gatacaaagacatgtccaaacaactgtttggaccatgggtactgtgaagatggaaagtgt
gtctgctttgagggctacactggtgtagactgctctgttctcacctgcccaggaaactgc
aatgaccaaggccagtgtttgaatggaatgtgcatctgtgatttaggcttcactggcgag
gactgctctgatatctccccacccagagacctgactgtgactgaagtggacccggaaaca
gtggacctcacctgggtcaatgagatgctcgtcacagagtatcttatcacttatgttcct
acggctcctggtggtttggagatggaaatgaaagtgtctggtgaaaaaaagactgccacc
attagggagctagagcctggcattgagtacctaatcagtgtctttgctgtcttgaacaac
aagatgagtgttccagtcagtgccagaatagccacacatcttcctgaacccgagggcctg
aaattcagatcagtgaaagagactgcagtggaagttgagtgggaccccttgaacatccca
tttgatggctggaaccttatcttcagaaacacaaaagaagaggatggagagatttcgaac
tctctcaccccacctgagaccacctttgagcagtctggtcttggacctggccaagagtat
gaggttaaactggaggtggtaaagaacaacacccgtggacaaccagccagcaggaacgtt
gtcacaatgattgatgctcccagccaagttgatgtacgtgatgtgacagacactacagcc
cttatcacctggattcagcctgtagctcaggtggacaggatctctgtgtcctatggcccg
aacactggttcctcagacaggaattcaattgaggtttcctccatggatacccagtatcat
ttggctgagctgtatcctgacactgagtatgaggtgtctctcatggcccacaggggagag
atgaccagctttcccatctatgagaccttcacaacagacctggatgcccctaagcacctc
aaggcagtggaacagacagatgagagcatcaccctggagtggaaaaacagcagagccaac
gtcctcaattaccgcatcaaatacggcccactttctggaggggagcatagagaactggtc
ttccccagtggcccacaagataccactcatgctaaactcactggtctcaaacctggaatc
gagtatggaatgggagtgacatcaatcaaagaagagcgtgagagtttgcccgtgacgacc
aatgctgtgactgatcttgatgctcccaaagatctagaggcaagcgaggccacagagact
acactggtgctggtttggaggaggccggtggccaagattgatctgtataggctagtgttt
gtgtcagcggacggcaggatagtcgaagtggaggtaccgggtggtgacaatacctatacc
ctgaggaacctaaaccctggcatgctgtacaccatcaccctgactgccgagagaggaaga
aagaagagtgcgccagccaacctgtcagcatccacagatgagaagaagcctcaggtggga
aacatcaccatctctgatgtgtcttgggacagattccgtgtgtcctgggagctggaaaga
ggagagcttgatggctttctaattgaagtgtctgaccccgatggcctggcagatggccag
aaccacactctatctggccaggagtccagcctggcagtcactgacctgtcccctagtact
ttctacagggtcactctttatgggctgtacaggggagatctcctagatcctgtctttgca
gaagccatcacagaggctgaacctgaagtggagcatctgttggtctcgggaatcacacca
cacagccttcaactggcatggacagcccgggaagacatctttgatacattcgctatcaaa
gtcattgattctaatggactagaccaacctcaccacattaaagtatccggagacagaaga
acagaagtggttacaggtcttaaggaagatacagagtatgaaatcgaactctttgggata
attttgggacggaaattccagcccattttggctgtagctcgaacagatctgggtacacct
aaggggatacgcttctcggacgtgactgacacatcagctactgttcactggactatgccc
catacccgagtagacagttaccgtgtcagctatgtaccacttcagggtggcagccccgtg
acactgcgagtagatggaggagagtctcaagccatattgcctaatctgacccctggagtg
acctatcaggtcatggtcattgctgtgaaggggttggaggagagtgagccaggatcggat
agagttacaacagccctggataagccacgaggtctgacagccgtcaacatcactgacact
gaggctctgctgctgtggcagccttccatcgctactgtggacggttatgtcatcacttac
agtgcagacactgtgactccagtgatgaaaagggtgtcagggaacactgtggagtttgag
atgagctctctcatacctgccacccaatacacagtaaaagtctatgcagtcagagacaca
tctaagagtgctgcaaccaccacagagttcaccacagatgttgatgccccccagaacctg
gcagccagtaatattcaaacagacagtgcaatgttgacatggaagccaccaagagcagac
atcagcgggtatatcctcagctttgagtccgctgatggtgtcctcatggaggtagtcttc
agccccacagcaacatattacagcatgtcccagctgactgcctccacagagtacacagtc
aaactgcaggccattgctggaccgaatagaagcagaattgtctctacagtcttcaccacc
atcggtgtgctgtacaggcatcctaaagactgctcacaggcgctgttgaatggagacaca
acttcggggttgtacactatttacctgcgtggagatgagaatcagcccctgcaggtctac
tgtgatatgaccaatgacggaggcggctggatcgtgtttgttagacggcagagtggtaaa
gtggagtttttcagaaactggaagaattacactgcaggcttcggtgacctgaacgatgaa
ttctggctaggtctctctaacctccataagatcacctcctctgggcagtatgagctccgt
gtggacctcagagataaggatgagtctgcgtatgcacagtatgacaaatttacagtctct
gaaccacgcagtcgctacaaagttcatgttggaggatacagcggcacggcaggtgactca
atgacttatcaccatggccgtccattctcaacctatgatcatgacaatgatatagctgtc
accaactgtgctctatcctataagggagctttctggtataaaaactgtcatcgagtgaat
attatgggccgatatggagacaatagtcacagcaagggtgtaaactggttccattggaag
ggtcatgagcactccatcgagtttgcagaaatgaagatcaggcccgccaacttcaggaac
tttgagggaaggagaaagcgatcataa
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