Myxocyprinus asiaticus (Chinese sucker): 127440314
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Entry
127440314 CDS
T08782
Name
(RefSeq) tripartite motif-containing protein 55a isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127440314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
masi04121
]
127440314
Ubiquitin system [BR:
masi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127440314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
Zn_ribbon_FGT1_2
Prot_inhib_II
Motif
Other DBs
NCBI-GeneID:
127440314
NCBI-ProteinID:
XP_051552792
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All DBs
Position
5:complement(44702554..44710790)
Genome browser
AA seq
447 aa
AA seq
DB search
MSVSLEYSYPRKRETMESLERQLICPICLEIFTKPVVILPCQHNLCRKCANDIFQASNPY
LPTRGGSSVGSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDMYKQETSSSSKPEPD
LKNDVLMCEEHQDEKINIYCVTCSVPTCSLCKVFGSHQTCEVAPLKSVFETQKAELSDGV
ALLVGNNDRIQGVISQLEESCRAVEENGRRQKSRVCEWFDRLYAVVEERRGELTLKITAE
QQEKLNYINGLQRKYKEHLDNAAKLVETGIQTMEESEMATFLQNAKPLLQKIAEGRNVSH
LEKVERGYENMDHFTANFQHERRAILSIDFIRDGDDNEDDDEEELAGDTVSPETQASSAV
TPTPAQQRQNPVPISPPMAMDSSQMSSKPNQSINILPAENMPSATPAPDSSLNPSTDVSA
QVPASPSQMSEDGPRHVFSFSWLNTPK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgagtttggaatattcgtatcccagaaagcgcgagaccatggaaagtttggag
aggcagctgatatgccccatctgcctcgagattttcaccaaaccggtggtaatcttaccg
tgccagcacaacctctgccgcaaatgtgccaacgacatatttcaggcctcaaacccctac
ttgcccacaaggggaggctcttcagtgggctctggcggccggttccgctgcccatcctgt
agacatgaagtggtcctggacaggcatggtgtgtatggcctgcagaggaacctgctggta
gagaacatcatagatatgtacaaacaagaaaccagcagcagcagtaagccggagccagat
ctgaagaatgacgtgttgatgtgtgaggagcatcaggatgagaagattaatatttattgt
gtgacctgctctgttcctacttgttcattatgtaaagtgtttgggagtcatcagacctgt
gaagttgctccgctcaaatctgttttcgagacacagaaagcagagttatctgatggtgtt
gctttgttggttggaaacaatgacagaattcagggcgtcatcagccagctggaggagagc
tgtagagccgtggaggagaatggccgtagacagaagtctcgtgtatgtgagtggtttgat
cgcctgtatgctgtggtggaggagcgcagaggagaactcacactgaagatcaccgcagaa
caacaggagaaacttaattacatcaatggcctacagcgcaagtacaaagaacacctggat
aacgcagccaaactggtggaaacaggaattcagactatggaggagtctgagatggccacc
tttctgcagaatgcaaagccactcctgcaaaagatagcagaaggcagaaatgtgtctcat
ttagagaaggtagagcgtggatatgagaatatggatcattttactgcaaacttccagcat
gaaagaagagcaatactcagcatagactttatcagggatggtgatgacaatgaagatgat
gatgaagaagaattagcaggtgataccgttagtcctgagactcaagcatcttcagcggtt
acgccgacccctgcccagcagagacaaaatcctgtgccaatctctcctccaatggcaatg
gactcctcccagatgtcatcaaaacctaaccaatcaataaatatcctaccagcagagaac
atgccctctgccacacctgctccagactccagtctcaacccttccacagatgtgtctgct
caggtacctgccagtcccagccagatgtctgaggatggaccacgccacgttttctctttt
tcctggttaaatacgccaaagtaa
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