Myxocyprinus asiaticus (Chinese sucker): 127440827
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Entry
127440827 CDS
T08782
Name
(RefSeq) splicing factor 1-like isoform X1
KO
K13095
splicing factor 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127440827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
masi03041
]
127440827
Spliceosome [BR:
masi03041
]
Complex A
Other components
Complex A specific factors
127440827
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
127440827
NCBI-ProteinID:
XP_051553735
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All DBs
Position
1:20564194..20574291
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AA seq
662 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDSGPGTGLMAPPVPAMSFPLQTFQQPQLLNPGFPQFP
GAVSSALSNPVGVGMQAQAGSGDFGQKKRKRSRWSSETPDQKTVIPGMPTVIPPGLTCDQ
ERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKKIEEE
RHSLITEMVGLNPEFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIE
KECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQ
GIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSITNTTVCTKCGGAGHI
SSDCKFTSSFAPRAGEPPQSAQDKARMDKEYLSLMAELGEAPVPASGGGHSNPPHSGPRP
AGPTNNQPPPNRPPWMNSGPADNRNFHGMHGGPGGPHNFPPPMPNMGGPPMPPNPNGMPP
PWMQPPPPPMGQGPAPPGHPIGLLPPPMGMMPPPPPPPNNQPPPPPSGPLPPWQQQAPPP
PPTSSMATSAPLPWQQNTTTTSTPGTGNLPPWQQPQPTATSATQAPPPMGGSMVPPPPGV
QPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPMDPNFVTMMGIPGMPPYGMPPAPPPPPP
QS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgggagccaacgcaaccccgctggggaagctgcacccgagtattggcgctaag
cgaggcttcgactccgggcccggcacggggcttatggctccgccagtgcctgcgatgtct
ttcccgctgcagaccttccagcaaccgcagttattaaacccaggcttcccccagttccct
ggagccgtgagttctgcgctctcaaacccggttggagtagggatgcaggcacaggcgggg
agtggagatttcggccagaagaagcggaaaaggagccgttggagcagcgaaacccccgat
cagaagaccgttatcccgggcatgcccaccgtgatccctcccgggctgacctgcgaccag
gagcgagcttacatagtccaactgcagattgaagacctgacacgtaaactgcgtacagga
gacctgggaatccctgttaaccctgaggacaggtctccatctccagagcccatctacaac
agtgaggggaagaggcttaacacgcgtgaataccgcacacgcaagaaaatagaggaagag
agacattctctaattactgagatggtgggactcaaccctgaattcaaaccccctgctgac
tacaaacccccagctactcgggtcagtgataaagtgatgattcctcaggacgaatatccg
gagattaattttgttggactgctgatcgggcctcgtggtaacactctgaagaacatcgag
aaggagtgctgtgcgaagattatgatccgtggcaaaggctcagtgaaggaagggaaggtg
ggtcgtaaggatggacagatgctgcctggtgaggatgaacctcttcatgccctggtcact
gctaacacaatggagaatgtcaagaaggctgtagagcagatacgtaacatcctcaagcag
ggcattgagactcctgaggaccagaatgacctgagaaaaatgcagctgagggagctggca
cgactcaatggcactctaagagaggatgacaacaggatcttgcgtccatggcagagcaca
gagcctcgcagcatcacaaacacaactgtgtgcacaaagtgtggtggagctggtcacatt
tcttcagactgcaaattcaccagttcttttgctcctcgggcaggcgagccaccccagtct
gcccaggataaggcccgaatggataaagagtacctgtccctcatggctgagcttggagag
gccccagtcccagcctctggtgggggccacagcaaccctccccacagtggaccacgtcca
gcaggaccaaccaacaaccagccaccaccaaatcgtccaccttggatgaattcaggccct
gctgataacaggaatttccatggcatgcatgggggtcctggtggccctcataactttcct
ccaccaatgccgaacatgggtggccctcccatgcctccaaaccccaacggaatgcctccc
ccctggatgcagcctccccctcctccaatgggccaaggcccagcaccacctggacaccct
attggtttattgcccccacccatggggatgatgcccccacctccccctccccccaacaac
cagccaccacctccaccctcagggcctctgccaccatggcaacagcaggctcctccccca
ccacccaccagcagcatggcaaccagtgctcctctaccatggcaacagaatacaaccaca
acatctacccctggtactggaaacctgccgccctggcagcagcctcaaccgacggccacc
tctgccactcaggcccctccacccatgggtggctctatggttccccctccacctggggtc
cagcccccacttccgcctggtgcaccaccacctccaccaccccctccacctggctcagca
ggcatgatgtacgcaccccctcccccacccccacccatggacccgaactttgtaaccatg
atggggattcctggaatgccgccttacgggatgcccccagcacctccacctcctccaccc
cagagttaa
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