KEGG   Myxocyprinus asiaticus (Chinese sucker): 127441382
Entry
127441382         CDS       T08782                                 
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
masi  Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04115  p53 signaling pathway
masi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:masi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    127441382
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    127441382
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:masi04121]
    127441382
Enzymes [BR:masi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     127441382
Ubiquitin system [BR:masi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    127441382
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     127441382
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_EIPR1 Beta-prop_RIG_2nd zf-C3HC4_2 EIF3I Beta-prop_TEP1_C Beta-prop_WDR19_1st zf-C3HC4 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd zf-RING_2 Beta-prop_EML Beta-prop_DCAF4 zf-RING_UBOX zf-C3HC4_3 Beta-prop_WDR90_POC16_2nd zf-RING_5 zf-C3HC4_4 RING_XB3-XBAT31 WD40_RFWD3 Beta-prop_WDR35_TULP_N WD40_like Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 zf-RING_10 zf-rbx1 WDR90_beta-prop_4th UvrD-helicase zf_C2H2_10 Sina_RING Terminase_2 Prok-RING_4 BrxL_N
Other DBs
NCBI-GeneID: 127441382
NCBI-ProteinID: XP_051554701
LinkDB
Position
5:37583323..37601815
AA seq 688 aa
MSSARQQQSGGVPVSVPGTSTGSTSSSSGAGGANSSSSGSQNGNSSGNGVSSRTLGSGAE
GQSARLGSSSRKRPYYNGLINPYEDKSNDFVCPICFEMIEEAHMTKCGHSFCYKCIRQSL
EDSNRCPKCNYIIDNVDQLYPNFLVNELILKQKQRSEEKRLKRDHPNGTKWQVFQDVLGA
DQENMDLANVNYILEYLLQKKKQLEAESQAAQRQILMEFLKEARRNKREQLEQLQKELNC
LEEDIKRVEEMSGMYSPVSDMDPNLDSTVPQFEAPSPAPSSSIIDPTEYIPPPFGGSSQG
KRQTWYNSTLASRRKRLTAHFEDLEQCYFSNRMSRITDDSRTVNQLDDFMECLSKFTRYN
SVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVFEYGTVIQDAVDIHYP
VNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNL
MDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPTSRYHLAFGCADHCVHYY
DLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLWNVNKPHCLRSFKGHINEK
NFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDKKEDDTNEFVSAV
CWRALPDGESNVLIAANSQGTIKVLELA
NT seq 2067 nt   +upstreamnt  +downstreamnt
atgtcaagcgctcgccagcagcagtctggtggtgtgccagtgtccgttcccgggacgagc
actgggagcacaagcagcagcagcggcgccggtggggcgaacagcagcagcagcggttct
cagaacggcaacagctccggtaacggggtgtcctctcgaactctgggatcgggagccgag
ggacagagcgctcgactgggttcgtcgagcaggaaaagaccctattataacggtctgatc
aatccgtatgaagataagagtaatgattttgtgtgccccatatgttttgaaatgatagag
gaagctcacatgacaaagtgtggccacagtttctgttataaatgtataagacaaagttta
gaggacagcaacagatgcccaaaatgtaattatattattgacaatgtggatcagctctac
cccaacttcttagtgaatgaactgatcctaaaacagaaacaaagatctgaggagaagcgt
ctgaaacgggatcaccctaatggaaccaaatggcaggttttccaggatgttcttggcgca
gatcaagagaacatggatttggcaaacgtaaactacatattagagtatctgttgcaaaaa
aagaaacaactagaggcggaatcacaagctgctcagcggcaaatcttaatggaattcctg
aaagaagccagacgaaataaaagagagcaactggaacagttacaaaaagaacttaactgt
ttagaagaggatatcaaaagagttgaggaaatgagtggtatgtactcaccagtgagtgac
atggaccccaacttggacagtactgtcccacagtttgaggctccctctcctgcacccagc
agtagcataatagaccccacagaatacattccgcccccttttggtggaagctctcagggt
aaaagacaaacttggtacaacagcactctggcgtcacggcgaaagagactcacagcacac
tttgaggatctagagcagtgttatttctccaataggatgtctcgaataacggatgacagc
aggactgttaaccaactggatgacttcatggagtgtctatccaaattcacccgttacaac
tctgtaaggcctctggccaccctctcttatgctagtgacctctataatggctccagtatt
gtgtccagcattgagtttgaccgcgactgtgattactttgccattgccggtgtcactaag
aaaattaaagtgtttgagtatggaactgtgatccaggatgccgtggacattcattatcct
gtcaacgagatgacatgtaactctaaaattagctgtatcagctggagtagctaccacaaa
aatctgttggcgagcagtgactatgaagggactgtcattctttgggatgggttcacaggg
cagaggtcaaaggtgtaccaggagcatgaaaagcgatgttggagtgtggatttcaacctt
atggatcctaagctcttagcatcgggatcagatgacgcaaaagttaagttgtggtccacc
aacctggataattcagtagccagcattgaagcgaaggccaatgtatgctgtgtcaaattc
agtccaacctctcgatatcaccttgcctttggttgtgcagaccactgcgtgcactactat
gacctgagaaacactaagcagcccatcatggtatttaaaggccacaggaaagcagtgtcc
tatgctaagtttgtcaatggagaagagattgtgtctgcctcaacagacagccagcttaaa
ctctggaatgtgaacaagccccattgcttgcgctccttcaaaggccacatcaacgagaag
aactttgtgggtctggcatctaatggagactatgtagcatgtggaagtgaaaacaactct
ctctacctgtactacaaggggctctccaagacgctgctgactttcaagtttgacactgtg
aagagtgtcctggacaaggacaaaaaagaggacgacaccaatgaatttgtcagtgcagtg
tgctggcgagcactacctgatggggagtcaaatgtgctgattgcagccaacagtcaagga
acaatcaaggtacttgagctagcctga

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