Myxocyprinus asiaticus (Chinese sucker): 127441996
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Entry
127441996 CDS
T08782
Name
(RefSeq) THO complex subunit 1-like
KO
K12878
THO complex subunit 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03013
Nucleocytoplasmic transport
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127441996
09122 Translation
03013 Nucleocytoplasmic transport
127441996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127441996
03041 Spliceosome [BR:
masi03041
]
127441996
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
127441996
Spliceosome [BR:
masi03041
]
Complex C
Other components
EJC/TREX
127441996
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127441996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Stonustoxin_helical
Motif
Other DBs
NCBI-GeneID:
127441996
NCBI-ProteinID:
XP_051555581
LinkDB
All DBs
Position
6:11333538..11347457
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AA seq
652 aa
AA seq
DB search
MSPPSHFNFTEAREKFTAATKSAVDIRNCKPLTSAFSHLPGNETEKKTTLDQALRGVLEE
QIVKQKVNVEDFLSLIYISIDGVTEGICSATSPFLLLADVLDCLPLDQCDKIFTFVEENV
STWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLDNITVFNKNEQESTLGLQHSEVKEEGMEEGEMGDEDAPAPCSIPIDYNLYRKFWTLQ
DYFRNPIQCYDKFLWMTFLKYSDETLAVFKSYKLDDMQASKRKLEEMRTAAGDHVYFAKF
LTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNCVLNDDQTLWIEDTTKLVY
QLLRETPPDGDKFASMVEHILNTEENWNSWKNEGCPSFVKERPAETKPIRPSRKRPAPED
FLGKGPDRKILMGNEELTRLWNLNPDNMEACKSDSREFMPSLEDFFVEAIEQADPTNMVE
DEYKVVRNSNYGWRALRLLSRRSPHFFQPTNQQFKSLADYLENMVIKLAKELPKDLPSEE
IKTGEEDDENGDNLLKESNDSPSIQSKMVTNSQMDDIATKLKAQWKTLADHLEMSEKEIR
VIESDSEDVELQAKMLLVAWQDREGSQATMDSLVTALNAAGFSNIADGLNET
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcctccgtcccatttcaacttcactgaagccagagagaaatttacggctgccacc
aaaagtgcggtggatatccggaactgtaaacccctgaccagcgctttcagtcatctgcct
ggaaatgaaacggagaagaaaaccactcttgaccaagctctccgaggagtccttgaagaa
cagatagtgaagcagaaagtgaatgttgaggattttctttctctgatctacatcagtata
gatggtgtgactgaaggcatctgctcggccaccagtccctttcttcttctggcagatgtt
ctcgactgtctccctctggatcaatgtgacaaaatctttacatttgttgaagaaaatgtt
tctacgtggaagtctaatacattttactccgctggaaaaaattatttgttaagaatgtgt
aatgatctcctcaggagactctccaaatctcagaatacagtgttttgtggacgaatccag
ctatttttagcacgtctcttccctttgtcagaaaaatctggactgaacctacagagtcag
tttaaccttgacaacatcacagtgttcaacaaaaatgagcaggagagcacacttggactg
caacactcagaagtgaaggaggaggggatggaggagggggagatgggtgatgaagatgca
ccagctccctgctctattcccatcgactacaacctgtacagaaagttctggaccctgcag
gactatttcagaaaccccatacaatgctatgacaagttcttatggatgactttcctcaag
tattcagacgagacactagccgtgttcaagagttataaactggacgacatgcaggcgtct
aagagaaagctggaggagatgaggactgcagctggagaccacgtctactttgccaagttt
ctcaccagtgagaaattgatggaccttcagttgagtgacagcaacttcagacgacacatt
ctgcttcaataccttatcctgttccagtacctcaagggccaagtcaagttcaagagttca
aactgtgttttaaatgatgatcagactttatggattgaggacacaaccaaacttgtctat
cagttactgagagaaaccccaccagatggtgacaagtttgcatctatggttgagcacatc
ctgaacacagaagagaactggaactcatggaagaatgagggctgcccaagctttgtgaaa
gaaagaccagcagagaccaaacccatccggcccagcagaaagagaccagcaccagaggac
ttcctggggaagggccctgatcgtaagatcctcatgggaaatgaagagcttacaaggctt
tggaatctaaatcctgacaacatggaggcgtgcaagtcagacagcagggagttcatgccg
tcactggaagatttttttgtagaggccatcgaacaggccgatcctacaaacatggtggag
gatgagtacaaagttgtgcgtaactcaaactatggctggcgagccctgcggctattgtcc
cggcgaagcccccacttcttccagcccaccaaccagcagttcaagagtctggctgactat
ctggaaaacatggtcatcaaactggccaaagagcttcctaaagaccttccatctgaggag
ataaaaacaggagaggaggatgatgagaatggagataatctgctgaaagagagcaatgat
agtcccagcattcagagcaagatggtgacaaacagtcagatggatgatattgccacaaaa
ctcaaagcccagtggaagacgctggcggaccatctggagatgagcgagaaggagatccgt
gtgatagagtcagacagtgaggacgtggagttgcaggcgaagatgctgctggtggcctgg
caggaccgagaaggctcccaagctacaatggatagcctggtcacggccctcaatgcagct
ggattcagcaacattgcagatggtcttaacgaaacatag
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