Myxocyprinus asiaticus (Chinese sucker): 127442182
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Entry
127442182 CDS
T08782
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
masi04131
]
127442182
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
masi04147
]
127442182
Membrane trafficking [BR:
masi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
127442182
Exosome [BR:
masi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127442182
Exosomal proteins of bladder cancer cells
127442182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
127442182
NCBI-ProteinID:
XP_051555985
LinkDB
All DBs
Position
6:38174987..38201431
Genome browser
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVDTE
VRGISGVDLFGASDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMLVFKLERERPAYAVYGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPRESDTQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDAEGVTLFDVQQK
RSLATVKIAKVKYVVWSTDANHVALLAKHAIMICNKKLESLCNIHENIRVKSGAWAENEV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRDCRPRVLNIDPTEYKFK
LALVNRKYEEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQGALYLGDVSERVRILKNCGQKSLAYLTAATHGMDEEAEALKETFDL
EKEMVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGRAGQMVADLDMDAP
GGEGWGEDAELHLDEDGFMDAQEGLGDEGAIGKEEGGGWEVEEDLDLPPELDVPAVGGGG
AEGEGFFVPPTKGTSPTQMWCNNSQLAVDHMLAGSFETAMRLLHDQVGVVQFGPYKHLFM
QTLSRGRTCYLGLPSLPCLHSYPQRNWKDSGAKGGLPAVGLRLSDLISRLQQCYQLTTAG
RFEEAVERFRVILLSVPLLVVDNKQEIAEAQQLITICKEYIVGLTMETERKKLPKDSLDQ
QKRLCEMAAYFTHCSLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPEVAQQ
TRKILAACEKNLTDAHQLNYDPHNPFDICAASYTPLYRGRPVEKCPLSGACYCPKYKGEV
CRVTQVTEIGKDVIGLRVSPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaaatttgagacaaagtcggcccgagtgaaagggttgagtttccacccaaag
cggccctggattctcgccagtcttcataatggtgtcatccagctttgggactatcgcatg
tgcactctcatcgacaagtttgacgagcatgatggtccagtcagagggattgacttccat
aagcagcagcctctgtttgtgtctggaggagatgattacaagatcaaggtgtggaactac
aagctacgtcgatgtcttttcactcttcttggacatcttgactacatacgcacaaccttc
ttccaccatgagtatccctggatcctgagtgcctcagacgatcagaccatccgcatttgg
aactggcagtccaggacatgtgtatgtgtgctgaccggacacaatcactatgtgatgtgc
gctcagttccacccctctgaggacctggtggtgtcggccagcctggatcagactgtgcgc
gtgtgggatatttccggtctgagaaagaagaacctgtctccaggtgctgtggacacagag
gtgcgcggcatctctggggtcgacctgtttggggcctctgatgcagtagtgaaacatgtt
ctggagggtcatgatagaggagtaaactgggcagccttccatcccagcatgcctctcatt
gtatcaggagcagatgaccgtcaagtcaagatctggaggatgaacgagtcaaaagcttgg
gagttggacacctgcagggggcactacaacaatgtgtcatgtgctgtgttccaccctcgt
caggaacttatcctgtccaactctgaggacaagagcatccgcgtgtgggacatgtccaag
aggacaggtgtccaaacattccgcagagaccacgaccgtttctgggtgctgggagctcat
cccaatctcaacctgtttgctgctggtcatgacagtgggatgctagtgtttaagctagaa
cgggagcgtccagcctatgccgtgtacggtaacatgctgtactatgtaaaagatcgtttc
ctgcgtcagcttgatttcaatagcagtaaggatacggccgtcatgcagctccgcagtgga
tcaaaattcccagtgttcagcatgtcctacaatcctgcagaaaatgctgtgctgttgtgc
actagagcaactaacctggaaaacagcacatacgacctgtactccattcccagagagagt
gacacacagaatcctgatgctcctgaggggaagcgctcctctggcctgactgcagtttgg
gttgccaggaaccggttcgccgtgcttgatcgcatgcactcactgctgataaagaacctg
aagaacgagattgtgaagaaggtacaggtaccgagttgtgaggagatcttctacgctgga
acaggatccttgttgctgcgggatgctgaaggagtcactctatttgacgtgcagcagaag
cgctccctcgccacagttaaaattgctaaagtcaaatatgtggtgtggagcactgatgcc
aaccatgtggctctgctggccaaacacgccatcatgatctgcaacaagaagttggaaagc
ctatgcaacatccatgagaacattagagtgaagagcggtgcctgggccgagaatgaagtc
ttcatctacaccacctccaaccacatcaaatatgctctcacctccggtgatcatggtata
atccgtacattggatctaccaatctacgtgacaagagttaggggcaacagtgtctactgt
ctggatcgtgattgcagaccacgagtgctcaacattgaccccacagagtacaaattcaaa
ctggctctggtcaatcgcaaatacgaagaggttcttcatatggtgcgtaatgctaaactg
gtaggccagtccatcattgcctacctgcagaagaagggttatccagaggttgcactacac
ttcgtaaaggatgagaagactcgctttagtttggccttggagtgtggaaacattgaggtg
gcactggaggctgctaaagccctggatgaacgtagctgttgggagcgtctcggcgaggct
gctcttctacagggtcatcaccaggttgtggagatgtgctaccagagaaccaagaacttc
gacaagctcaccttcttgtacctcattactggcaacctggccaagctgaggaagatgatg
aagattgctgagataaggaaggacatgagtgggcactatcagggcgcgctctatctgggt
gatgtcagtgagcgtgtgcgaatcctgaagaattgtggacagaagtctttggcttacctg
actgctgccactcatgggatggatgaggaggctgaggcccttaaagagacatttgacctg
gagaaagaaatggtgccagaggtggatcccaacgctcagctgttgcaaccaccacctccc
atcaaccccctggacactaactggcctctgctcactgtctctaagggcttctttgaggga
gccattgctgccaaaggacgagcaggacagatggttgctgacctggatatggatgctcca
ggaggagaaggctggggagaggatgcagaacttcatctggatgaagatggattcatggat
gctcaagagggattgggagatgagggagctatcgggaaagaggaaggtggaggctgggaa
gttgaggaagatctggacctccctccagaactggatgtacctgctgttggtggaggtggc
gcagagggagaaggtttctttgtgccacctactaagggcacaagtcccacccaaatgtgg
tgcaacaactctcagctggctgtggatcacatgctagctggatcctttgaaacagctatg
aggttactacacgaccaggtcggtgtggttcagtttgggccctataagcatctcttcatg
cagactctgtctcgaggccgcacctgttacctgggcctcccgtctctgccgtgcctgcac
agttaccctcagaggaattggaaggacagtggggctaaagggggcctgcctgctgtgggc
ttgcgtctctctgacctcatttcacgtctgcagcagtgctatcagctgaccacagcagga
cgttttgaggaagctgttgaacgtttcagagtcattctgctatctgtaccgctgcttgtt
gtcgataacaaacaagagatcgcagaggcacagcagctgatcactatctgtaaagagtat
attgttggcctcaccatggagacagagaggaagaaacttcctaaagactcactagatcaa
cagaagaggctgtgtgagatggcagcatatttcacacactgcagtctgcagcctgtccac
atggtattagtattgagaacagcactcaatcttttttttaaactccgtaacttcaaaaca
gctgcaggatttgctcgccgtctactcgagctgggccccaaaccagaagtggcacaacag
acacgaaagattcttgcagcatgtgaaaagaacttgacagatgctcatcaactgaactac
gaccctcacaatccctttgacatctgcgcagcctcctacactcccctgtaccgtgggcga
ccagtagagaagtgtcccctgtctggagcctgctactgtcccaaatacaaaggagaggtc
tgcagggtcacacaggtaactgagatcggtaaagatgtgattggattgcgtgtcagtcca
ctgcagttccgatga
DBGET
integrated database retrieval system